FFCP PHASE1:Hg19::chr4:102734967..102735022,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55024 | |EntrezGene=55024 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18233 | |HGNC=18233 | ||
|TSSclassifier=strong | |||
|UniProt=Q8NDB2 | |UniProt=Q8NDB2 | ||
|association_with_transcript=0bp_to_ENST00000444316,NM_001083907,uc003hvz.3_5end | |association_with_transcript=0bp_to_ENST00000444316,NM_001083907,uc003hvz.3_5end | ||
|cluster_id=chr4:102734967..102735022,+ | |||
|coexpression_cluster_id=C47 | |||
|description=CAGE_peak_3_at_BANK1_5end | |description=CAGE_peak_3_at_BANK1_5end | ||
|id=chr4:102734967..102735022,+ | |id=chr4:102734967..102735022,+ | ||
|ontology_enrichment_celltype=CL:0000236!1.93e-27!14;CL:0000945!3.55e-25!24;CL:0000826!3.55e-25!24;CL:0000738!1.22e-13!140;CL:0002087!7.96e-12!119;CL:0000542!4.60e-11!53;CL:0000051!4.60e-11!53;CL:0000037!1.49e-10!172;CL:0000566!1.49e-10!172;CL:0000838!4.93e-10!52;CL:0000988!2.13e-09!182;CL:0002032!1.80e-08!165;CL:0000837!1.80e-08!165;CL:0002031!1.03e-07!124;CL:0000842!2.77e-07!3 | |ontology_enrichment_celltype=CL:0000236!1.93e-27!14;CL:0000945!3.55e-25!24;CL:0000826!3.55e-25!24;CL:0000738!1.22e-13!140;CL:0002087!7.96e-12!119;CL:0000542!4.60e-11!53;CL:0000051!4.60e-11!53;CL:0000037!1.49e-10!172;CL:0000566!1.49e-10!172;CL:0000838!4.93e-10!52;CL:0000988!2.13e-09!182;CL:0002032!1.80e-08!165;CL:0000837!1.80e-08!165;CL:0002031!1.03e-07!124;CL:0000842!2.77e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000945;5.25e-53;24!CL:0000236;3.46e-51;13!CL:0000542;7.09e-18;53!CL:0000226;2.35e-13;3!CL:0000842;2.35e-13;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000236,1.49e-55,14;CL:0000945,5.09e-53,24;CL:0000826,5.09e-53,24;CL:0000542,1.57e-24,53;CL:0000051,1.57e-24,53;CL:0000838,2.96e-22,52;CL:0000226,2.41e-13,3;CL:0000842,2.41e-13,3;CL:0002087,1.23e-12,115;CL:0000738,4.29e-11,136;CL:0000785,1.76e-10,2;CL:0000955,1.76e-10,2;CL:0000818,1.76e-10,2;CL:0000954,1.76e-10,2;CL:0000816,1.76e-10,2;CL:0000037,4.62e-08,168;CL:0000988,2.06e-07,177;CL:0002031,2.40e-07,120;CL:0000817,2.98e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000051;7.09e-18;53!CL:0000954;1.76e-10;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0060058;1.75e-07;10 | |||
|ontology_enrichment_disease_v019_2=DOID:0060058,1.72e-07,10 | |||
|ontology_enrichment_uberon=UBERON:0007023!7.39e-20!115;UBERON:0000178!1.20e-19!15;UBERON:0000179!1.20e-19!15;UBERON:0000463!1.20e-19!15;UBERON:0002193!6.72e-09!112;UBERON:0002390!1.19e-08!102;UBERON:0003061!1.19e-08!102 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;4.29e-40;15!UBERON:0000179;4.29e-40;15!UBERON:0000463;4.29e-40;15!UBERON:0002390;2.73e-26;32!UBERON:0002193;2.17e-18;42!UBERON:0004177;1.43e-08;5!UBERON:0005057;1.43e-08;5!UBERON:0002106;4.93e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,4.00e-40,15;UBERON:0000179,4.00e-40,15;UBERON:0000463,4.00e-40,15;UBERON:0007023,6.60e-11,114;UBERON:0002193,6.50e-08,108;UBERON:0002106,5.16e-07,3;UBERON:0004854,5.16e-07,3;UBERON:0009034,5.16e-07,3;UBERON:0002095,5.16e-07,3;UBERON:0004782,5.16e-07,3;UBERON:0003281,5.16e-07,3;UBERON:0009664,5.16e-07,3;UBERON:0002296,5.16e-07,3;UBERON:0005602,5.16e-07,3;UBERON:0001179,5.16e-07,3;UBERON:0006293,5.16e-07,3;UBERON:0002390,8.80e-07,98;UBERON:0003061,8.80e-07,98 | |||
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| ||
|short_description=p3@BANK1 | |short_description=p3@BANK1 | ||
}} | }} |
Latest revision as of 03:26, 20 September 2015
Short description: | p3@BANK1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_BANK1_5end |
Coexpression cluster: | C47_CD19_Burkitt_acute_xeroderma_tonsil_lymphoma_appendix |
Association with transcript: | 0bp_to_ENST00000444316, NM_001083907, uc003hvz.3_5end |
EntrezGene: | BANK1 |
HGNC: | 18233 |
UniProt: | Q8NDB2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
B cell | 1.49e-55 | 14 |
lymphocyte of B lineage | 5.09e-53 | 24 |
pro-B cell | 5.09e-53 | 24 |
lymphocyte | 1.57e-24 | 53 |
common lymphoid progenitor | 1.57e-24 | 53 |
lymphoid lineage restricted progenitor cell | 2.96e-22 | 52 |
single nucleate cell | 2.41e-13 | 3 |
mononuclear cell | 2.41e-13 | 3 |
nongranular leukocyte | 1.23e-12 | 115 |
leukocyte | 4.29e-11 | 136 |
mature B cell | 1.76e-10 | 2 |
pre-B-II cell | 1.76e-10 | 2 |
transitional stage B cell | 1.76e-10 | 2 |
small pre-B-II cell | 1.76e-10 | 2 |
immature B cell | 1.76e-10 | 2 |
hematopoietic stem cell | 4.62e-08 | 168 |
hematopoietic cell | 2.06e-07 | 177 |
hematopoietic lineage restricted progenitor cell | 2.40e-07 | 120 |
precursor B cell | 2.98e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
blood | 4.00e-40 | 15 |
haemolymphatic fluid | 4.00e-40 | 15 |
organism substance | 4.00e-40 | 15 |
adult organism | 6.60e-11 | 114 |
hemolymphoid system | 6.50e-08 | 108 |
spleen | 5.16e-07 | 3 |
gastrointestinal system mesentery | 5.16e-07 | 3 |
stomach region | 5.16e-07 | 3 |
mesentery | 5.16e-07 | 3 |
gastrointestinal system serosa | 5.16e-07 | 3 |
mesentery of stomach | 5.16e-07 | 3 |
gut mesentery | 5.16e-07 | 3 |
dorsal mesentery | 5.16e-07 | 3 |
dorsal mesogastrium | 5.16e-07 | 3 |
peritoneal cavity | 5.16e-07 | 3 |
spleen primordium | 5.16e-07 | 3 |
hematopoietic system | 8.80e-07 | 98 |
blood island | 8.80e-07 | 98 |
Ontology term | p-value | n |
---|---|---|
lymphoma | 1.72e-07 | 10 |