FFCP PHASE1:Hg19::chr4:140048091..140048100,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr4:140048091..140048100,- | |||
|coexpression_cluster_id=C235 | |||
|description=CAGE_peak_at_chr4:140048091..140048100,- | |description=CAGE_peak_at_chr4:140048091..140048100,- | ||
|id=chr4:140048091..140048100,- | |id=chr4:140048091..140048100,- | ||
|ontology_enrichment_celltype=CL:0002231!6.73e-11!3;CL:0002563!1.82e-08!4 | |ontology_enrichment_celltype=CL:0002231!6.73e-11!3;CL:0002563!1.82e-08!4 | ||
|ontology_enrichment_celltype_v019=CL:0002231;4.27e-34;3!CL:0002563;7.14e-26;4!CL:0002076;3.95e-11;42 | |||
|ontology_enrichment_celltype_v019_2=CL:0002231,4.27e-34,3;CL:0002563,7.14e-26,4;CL:0002076,1.07e-10,42;CL:0000223,4.33e-08,58 | |||
|ontology_enrichment_development_v019=CL:0000223;3.54e-08;58 | |||
|ontology_enrichment_disease=DOID:5409!2.26e-08!4 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001874!1.78e-29!1;UBERON:0005383!8.99e-11!3;UBERON:0005382!8.99e-11!3;UBERON:0001242!1.82e-08!4;UBERON:0001262!1.82e-08!4;UBERON:0004786!1.82e-08!4;UBERON:0004808!1.82e-08!4;UBERON:0001277!1.82e-08!4;UBERON:0000369!2.11e-08!4;UBERON:0002435!2.11e-08!4;UBERON:0000204!2.11e-08!4;UBERON:0010082!2.11e-08!4;UBERON:0003350!5.08e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0001242;7.14e-26;4!UBERON:0001262;7.14e-26;4!UBERON:0004786;7.14e-26;4!UBERON:0004808;7.14e-26;4!UBERON:0001277;7.14e-26;4!UBERON:0000485;1.91e-15;7!UBERON:0003929;1.91e-15;7!UBERON:0003350;1.07e-13;8!UBERON:0002367;2.16e-10;11!UBERON:0010147;2.16e-10;11!UBERON:0003937;1.22e-09;12!UBERON:0005399;1.22e-09;12!UBERON:0000160;7.60e-07;17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001242,7.14e-26,4;UBERON:0001262,7.14e-26,4;UBERON:0004786,7.14e-26,4;UBERON:0004808,7.14e-26,4;UBERON:0001277,7.14e-26,4;UBERON:0003350,1.07e-13,8;UBERON:0000485,2.45e-12,9;UBERON:0002367,2.16e-10,11;UBERON:0010147,2.16e-10,11;UBERON:0009846,2.16e-10,11;UBERON:0003353,2.16e-10,11;UBERON:0004902,2.16e-10,11;UBERON:0003820,2.16e-10,11;UBERON:0009847,2.16e-10,11;UBERON:0003937,1.22e-09,12;UBERON:0005399,1.22e-09,12;UBERON:0003929,1.34e-08,54;UBERON:0000162,1.86e-08,14;UBERON:0001353,1.86e-08,14;UBERON:0000163,1.86e-08,14;UBERON:0006866,1.86e-08,14;UBERON:0000164,1.86e-08,14;UBERON:0000931,1.86e-08,14;UBERON:0004122,5.55e-08,15;UBERON:0000160,7.60e-07,17 | |||
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|short_description=p@chr4:140048091..140048100,- | |short_description=p@chr4:140048091..140048100,- | ||
}} | }} |
Latest revision as of 01:43, 30 July 2015
Short description: | p@chr4:140048091..140048100, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr4:140048091..140048100, - |
Coexpression cluster: | C235_Intestinal_Prostate_liver_colon_small_kidney_pancreas |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of prostate | 4.27e-34 | 3 |
intestinal epithelial cell | 7.14e-26 | 4 |
endo-epithelial cell | 1.07e-10 | 42 |
endodermal cell | 4.33e-08 | 58 |
Ontology term | p-value | n |
---|---|---|
intestinal mucosa | 7.14e-26 | 4 |
wall of intestine | 7.14e-26 | 4 |
gastrointestinal system mucosa | 7.14e-26 | 4 |
gastrointestinal system epithelium | 7.14e-26 | 4 |
intestinal epithelium | 7.14e-26 | 4 |
epithelium of mucosa | 1.07e-13 | 8 |
simple columnar epithelium | 2.45e-12 | 9 |
prostate gland | 2.16e-10 | 11 |
male accessory sex gland | 2.16e-10 | 11 |
embryonic cloacal epithelium | 2.16e-10 | 11 |
epithelium of hindgut | 2.16e-10 | 11 |
urogenital sinus epithelium | 2.16e-10 | 11 |
prostate bud | 2.16e-10 | 11 |
prostate field | 2.16e-10 | 11 |
sex gland | 1.22e-09 | 12 |
male reproductive gland | 1.22e-09 | 12 |
gut epithelium | 1.34e-08 | 54 |
cloaca | 1.86e-08 | 14 |
anal region | 1.86e-08 | 14 |
embryonic cloaca | 1.86e-08 | 14 |
terminal part of digestive tract | 1.86e-08 | 14 |
primitive urogenital sinus | 1.86e-08 | 14 |
proctodeum | 1.86e-08 | 14 |
genitourinary system | 5.55e-08 | 15 |
intestine | 7.60e-07 | 17 |