FFCP PHASE1:Hg19::chr1:174188378..174188390,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9910 | |EntrezGene=9910 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=24663 | |HGNC=24663 | ||
|TSSclassifier=strong | |||
|UniProt=F1LJ00 | |UniProt=F1LJ00 | ||
|association_with_transcript=82bp_to_AB449904_5end | |association_with_transcript=82bp_to_AB449904_5end | ||
|cluster_id=chr1:174188378..174188390,+ | |||
|coexpression_cluster_id=C44 | |||
|description=CAGE_peak_13_at_RABGAP1L_5end | |description=CAGE_peak_13_at_RABGAP1L_5end | ||
|id=chr1:174188378..174188390,+ | |id=chr1:174188378..174188390,+ | ||
|ontology_enrichment_celltype=CL:0000236!1.62e-26!14;CL:0000945!9.97e-20!24;CL:0000826!9.97e-20!24;CL:0000542!1.69e-15!53;CL:0000051!1.69e-15!53;CL:0000838!1.75e-14!52;CL:0000738!4.99e-14!140;CL:0000037!2.75e-11!172;CL:0000566!2.75e-11!172;CL:0000451!4.29e-11!10;CL:0000988!5.26e-10!182;CL:0002087!1.06e-08!119;CL:0002032!2.02e-08!165;CL:0000837!2.02e-08!165;CL:0000990!1.08e-07!8;CL:0000784!1.44e-07!3;CL:0000842!5.00e-07!3;CL:0000767!6.96e-07!3;CL:0000453!7.10e-07!5 | |ontology_enrichment_celltype=CL:0000236!1.62e-26!14;CL:0000945!9.97e-20!24;CL:0000826!9.97e-20!24;CL:0000542!1.69e-15!53;CL:0000051!1.69e-15!53;CL:0000838!1.75e-14!52;CL:0000738!4.99e-14!140;CL:0000037!2.75e-11!172;CL:0000566!2.75e-11!172;CL:0000451!4.29e-11!10;CL:0000988!5.26e-10!182;CL:0002087!1.06e-08!119;CL:0002032!2.02e-08!165;CL:0000837!2.02e-08!165;CL:0000990!1.08e-07!8;CL:0000784!1.44e-07!3;CL:0000842!5.00e-07!3;CL:0000767!6.96e-07!3;CL:0000453!7.10e-07!5 | ||
|ontology_enrichment_celltype_v019=CL:0000236;1.81e-68;13!CL:0000945;4.65e-36;24!CL:0000784;9.15e-21;3!CL:0000451;1.69e-20;10!CL:0000542;1.69e-14;53!CL:0000453;1.23e-11;5!CL:0000990;2.29e-11;8!CL:0000226;2.01e-09;3!CL:0000767;2.01e-09;3!CL:0000842;2.01e-09;3!CL:0000094;1.45e-07;8!CL:0000785;2.31e-07;1!CL:0000819;2.31e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000236,2.52e-63,14;CL:0000945,5.28e-36,24;CL:0000826,5.28e-36,24;CL:0000738,6.19e-22,136;CL:0000784,9.16e-21,3;CL:0000451,2.00e-20,10;CL:0000838,4.42e-18,52;CL:0000542,1.08e-17,53;CL:0000051,1.08e-17,53;CL:0000037,7.06e-17,168;CL:0000988,8.79e-16,177;CL:0000453,1.48e-11,5;CL:0002032,1.77e-11,161;CL:0000837,1.77e-11,161;CL:0000990,2.62e-11,8;CL:0002087,9.29e-11,115;CL:0000767,1.81e-09,3;CL:0000226,2.23e-09,3;CL:0000842,2.23e-09,3;CL:0000094,1.34e-07,8;CL:0002031,1.56e-07,120;CL:0000819,2.98e-07,1 | |||
|ontology_enrichment_development_v019=CL:0000051;1.69e-14;53!UBERON:0006298;2.31e-07;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:0060073;2.31e-07;1!DOID:8675;2.31e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0060073,2.98e-07,1;DOID:8675,2.98e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0007023!2.40e-13!115;UBERON:0002298!2.40e-07!8 | |||
|ontology_enrichment_uberon_v019=UBERON:0002372;1.44e-07;1!UBERON:0001961;1.44e-07;1!UBERON:0001744;1.44e-07;1!UBERON:0001042;1.44e-07;1!UBERON:0001735;1.44e-07;1!UBERON:0001736;2.31e-07;1!UBERON:0000178;9.05e-07;15!UBERON:0000179;9.05e-07;15!UBERON:0000463;9.05e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002372,1.48e-07,1;UBERON:0001961,1.48e-07,1;UBERON:0001744,1.48e-07,1;UBERON:0001735,1.48e-07,1;UBERON:0001736,1.69e-07,1;UBERON:0006298,1.69e-07,1;UBERON:0000178,9.71e-07,15;UBERON:0000179,9.71e-07,15;UBERON:0000463,9.71e-07,15 | |||
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| ||
|short_description=p13@RABGAP1L | |short_description=p13@RABGAP1L | ||
}} | }} |
Latest revision as of 18:48, 18 September 2015
Short description: | p13@RABGAP1L |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_13_at_RABGAP1L_5end |
Coexpression cluster: | C44_Dendritic_CD19_CD133_granulocyte_acute_thymus_immature |
Association with transcript: | 82bp_to_AB449904_5end |
EntrezGene: | RABGAP1L |
HGNC: | 24663 |
UniProt: | F1LJ00 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
B cell | 2.52e-63 | 14 |
lymphocyte of B lineage | 5.28e-36 | 24 |
pro-B cell | 5.28e-36 | 24 |
leukocyte | 6.19e-22 | 136 |
plasmacytoid dendritic cell | 9.16e-21 | 3 |
dendritic cell | 2.00e-20 | 10 |
lymphoid lineage restricted progenitor cell | 4.42e-18 | 52 |
lymphocyte | 1.08e-17 | 53 |
common lymphoid progenitor | 1.08e-17 | 53 |
hematopoietic stem cell | 7.06e-17 | 168 |
hematopoietic cell | 8.79e-16 | 177 |
Langerhans cell | 1.48e-11 | 5 |
hematopoietic oligopotent progenitor cell | 1.77e-11 | 161 |
hematopoietic multipotent progenitor cell | 1.77e-11 | 161 |
conventional dendritic cell | 2.62e-11 | 8 |
nongranular leukocyte | 9.29e-11 | 115 |
basophil | 1.81e-09 | 3 |
single nucleate cell | 2.23e-09 | 3 |
mononuclear cell | 2.23e-09 | 3 |
granulocyte | 1.34e-07 | 8 |
hematopoietic lineage restricted progenitor cell | 1.56e-07 | 120 |
B-1 B cell | 2.98e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
tonsil | 1.48e-07 | 1 |
mucosa-associated lymphoid tissue | 1.48e-07 | 1 |
lymphoid tissue | 1.48e-07 | 1 |
tonsillar ring | 1.48e-07 | 1 |
submandibular gland | 1.69e-07 | 1 |
submandibular gland primordium | 1.69e-07 | 1 |
blood | 9.71e-07 | 15 |
haemolymphatic fluid | 9.71e-07 | 15 |
organism substance | 9.71e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
lymphatic system cancer | 2.98e-07 | 1 |
lymphosarcoma | 2.98e-07 | 1 |