FFCP PHASE1:Hg19::chr1:183213387..183213401,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:183213387..183213401,+ | |||
|coexpression_cluster_id=C362 | |||
|description=CAGE_peak_at_chr1:183213387..183213401,+ | |description=CAGE_peak_at_chr1:183213387..183213401,+ | ||
|id=chr1:183213387..183213401,+ | |id=chr1:183213387..183213401,+ | ||
|ontology_enrichment_celltype=CL:0000066!2.50e-23!254;CL:0002076!6.62e-20!43;CL:0000223!3.17e-13!59;CL:0002368!1.51e-11!13;CL:0002621!7.79e-11!3;CL:0002251!1.18e-10!21;CL:0002623!6.02e-10!3;CL:0002159!1.99e-08!13;CL:0002327!6.97e-08!4;CL:0000076!1.61e-07!62;CL:0002077!1.83e-07!33;CL:0000575!2.66e-07!2;CL:0000220!2.71e-07!246;CL:0002536!3.01e-07!2;CL:0002321!3.60e-07!248 | |ontology_enrichment_celltype=CL:0000066!2.50e-23!254;CL:0002076!6.62e-20!43;CL:0000223!3.17e-13!59;CL:0002368!1.51e-11!13;CL:0002621!7.79e-11!3;CL:0002251!1.18e-10!21;CL:0002623!6.02e-10!3;CL:0002159!1.99e-08!13;CL:0002327!6.97e-08!4;CL:0000076!1.61e-07!62;CL:0002077!1.83e-07!33;CL:0000575!2.66e-07!2;CL:0000220!2.71e-07!246;CL:0002536!3.01e-07!2;CL:0002321!3.60e-07!248 | ||
|ontology_enrichment_celltype_v019=CL:0002621;2.40e-21;3!CL:0002231;4.02e-21;3!CL:0002076;2.58e-17;42!CL:0002368;2.42e-11;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0002231,2.17e-21,3;CL:0002621,2.96e-21,3;CL:0002076,1.73e-17,42;CL:0000223,1.50e-12,58;CL:0002368,2.26e-11,13;CL:0000066,4.34e-09,253 | |||
|ontology_enrichment_development_v019=CL:0000223;1.05e-07;58 | |||
|ontology_enrichment_disease=DOID:1749!4.43e-07!14 | |ontology_enrichment_disease=DOID:1749!4.43e-07!14 | ||
|ontology_enrichment_disease_v019=DOID:4468;6.67e-09;2 | |||
|ontology_enrichment_disease_v019_2=DOID:4468,6.42e-09,2 | |||
|ontology_enrichment_uberon=UBERON:0001949!7.79e-11!3;UBERON:0001911!6.97e-08!4;UBERON:0005333!6.97e-08!4;UBERON:0008425!6.97e-08!4;UBERON:0005311!6.97e-08!4;UBERON:0001004!2.52e-07!72;UBERON:0004119!2.91e-07!169;UBERON:0000925!2.91e-07!169;UBERON:0006595!2.91e-07!169 | |||
|ontology_enrichment_uberon_v019=UBERON:0001949;2.40e-21;3!UBERON:0000486;3.80e-12;12!UBERON:0003929;1.04e-09;7!UBERON:0003350;1.31e-08;8!UBERON:0001828;1.31e-08;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001949,2.96e-21,3;UBERON:0003350,1.42e-08,8;UBERON:0001828,1.42e-08,8;UBERON:0000161,4.42e-07,36 | |||
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| ||
|short_description=p@chr1:183213387..183213401,+ | |short_description=p@chr1:183213387..183213401,+ | ||
}} | }} |
Latest revision as of 01:11, 28 July 2015
Short description: | p@chr1:183213387..183213401, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:183213387..183213401, + |
Coexpression cluster: | C362_Small_Mallassezderived_Urothelial_Gingival_Prostate_Keratinocyte_Tracheal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of prostate | 2.17e-21 | 3 |
gingival epithelial cell | 2.96e-21 | 3 |
endo-epithelial cell | 1.73e-17 | 42 |
endodermal cell | 1.50e-12 | 58 |
respiratory epithelial cell | 2.26e-11 | 13 |
epithelial cell | 4.34e-09 | 253 |
Ontology term | p-value | n |
---|---|---|
gingival epithelium | 2.96e-21 | 3 |
epithelium of mucosa | 1.42e-08 | 8 |
gingiva | 1.42e-08 | 8 |
orifice | 4.42e-07 | 36 |
Ontology term | p-value | n |
---|---|---|
clear cell adenocarcinoma | 6.42e-09 | 2 |