FFCP PHASE1:Hg19::chr4:42658982..42659008,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10396 | |EntrezGene=10396 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13531 | |HGNC=13531 | ||
|TSSclassifier=strong | |||
|UniProt=Q9Y2Q0,Q4G1C1 | |UniProt=Q9Y2Q0,Q4G1C1 | ||
|association_with_transcript=101bp_to_ENST00000264449,ENST00000510289_5end | |association_with_transcript=101bp_to_ENST00000264449,ENST00000510289_5end | ||
|cluster_id=chr4:42658982..42659008,- | |||
|coexpression_cluster_id=C4415 | |||
|description=CAGE_peak_3_at_ATP8A1_5end | |description=CAGE_peak_3_at_ATP8A1_5end | ||
|id=chr4:42658982..42659008,- | |id=chr4:42658982..42659008,- | ||
|ontology_enrichment_celltype=CL:0000542!1.62e-20!53;CL:0000051!1.62e-20!53;CL:0000838!1.64e-20!52;CL:0000738!1.19e-19!140;CL:0000037!4.07e-19!172;CL:0000566!4.07e-19!172;CL:0000988!5.99e-19!182;CL:0002032!7.22e-17!165;CL:0000837!7.22e-17!165;CL:0002087!2.41e-15!119;CL:0002031!2.71e-15!124;CL:0000084!7.32e-12!25;CL:0000827!7.32e-12!25;CL:0000791!9.08e-12!18;CL:0000789!9.08e-12!18;CL:0002420!9.08e-12!18;CL:0002419!9.08e-12!18;CL:0000790!9.08e-12!18;CL:0000625!7.62e-09!11;CL:0000945!5.34e-08!24;CL:0000826!5.34e-08!24 | |ontology_enrichment_celltype=CL:0000542!1.62e-20!53;CL:0000051!1.62e-20!53;CL:0000838!1.64e-20!52;CL:0000738!1.19e-19!140;CL:0000037!4.07e-19!172;CL:0000566!4.07e-19!172;CL:0000988!5.99e-19!182;CL:0002032!7.22e-17!165;CL:0000837!7.22e-17!165;CL:0002087!2.41e-15!119;CL:0002031!2.71e-15!124;CL:0000084!7.32e-12!25;CL:0000827!7.32e-12!25;CL:0000791!9.08e-12!18;CL:0000789!9.08e-12!18;CL:0002420!9.08e-12!18;CL:0002419!9.08e-12!18;CL:0000790!9.08e-12!18;CL:0000625!7.62e-09!11;CL:0000945!5.34e-08!24;CL:0000826!5.34e-08!24 | ||
|ontology_enrichment_celltype_v019=CL:0000791;1.39e-15;18!CL:0000789;1.39e-15;18!CL:0002419;1.39e-15;18!CL:0000084;1.77e-14;25!CL:0000542;3.07e-14;53!CL:0000625;1.65e-11;11!CL:0000945;2.72e-08;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0000838,4.95e-24,52;CL:0000542,2.92e-23,53;CL:0000051,2.92e-23,53;CL:0000791,1.67e-15,18;CL:0000789,1.67e-15,18;CL:0002420,1.67e-15,18;CL:0002419,1.67e-15,18;CL:0000790,1.67e-15,18;CL:0000738,2.05e-14,136;CL:0000084,2.25e-14,25;CL:0000827,2.25e-14,25;CL:0000988,1.91e-13,177;CL:0000037,3.72e-13,168;CL:0000625,1.64e-11,11;CL:0002087,5.45e-11,115;CL:0002032,9.08e-11,161;CL:0000837,9.08e-11,161;CL:0002031,5.46e-10,120;CL:0000945,1.74e-08,24;CL:0000826,1.74e-08,24;CL:0000236,8.82e-07,14 | |||
|ontology_enrichment_development_v019=CL:0000790;1.39e-15;18!CL:0000051;3.07e-14;53!UBERON:0006601;2.54e-09;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.33e-44!115;UBERON:0003080!1.23e-23!42;UBERON:0002780!2.25e-23!41;UBERON:0001890!2.25e-23!41;UBERON:0006240!2.25e-23!41;UBERON:0001049!4.76e-23!57;UBERON:0005068!4.76e-23!57;UBERON:0006241!4.76e-23!57;UBERON:0007135!4.76e-23!57;UBERON:0001893!1.50e-19!34;UBERON:0002791!7.27e-19!33;UBERON:0001017!8.45e-19!82;UBERON:0002020!9.13e-19!34;UBERON:0003528!9.13e-19!34;UBERON:0002616!9.89e-19!59;UBERON:0001869!1.35e-18!32;UBERON:0005743!1.51e-18!86;UBERON:0000955!2.85e-18!69;UBERON:0006238!2.85e-18!69;UBERON:0003075!4.41e-17!86;UBERON:0007284!4.41e-17!86;UBERON:0000073!4.70e-17!94;UBERON:0001016!4.70e-17!94;UBERON:0003056!7.96e-16!61;UBERON:0002619!3.39e-15!22;UBERON:0002346!4.56e-15!90;UBERON:0001950!5.89e-14!20;UBERON:0000956!1.37e-13!25;UBERON:0000203!1.37e-13!25;UBERON:0000178!6.21e-09!15;UBERON:0000179!6.21e-09!15;UBERON:0000463!6.21e-09!15;UBERON:0000153!1.84e-08!129;UBERON:0007811!1.84e-08!129;UBERON:0002420!8.49e-08!9;UBERON:0007245!8.49e-08!9;UBERON:0010009!8.49e-08!9;UBERON:0010011!8.49e-08!9;UBERON:0000454!8.49e-08!9;UBERON:0000033!7.44e-07!123 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;1.22e-21;41!UBERON:0001890;1.22e-21;41!UBERON:0001893;2.70e-21;34!UBERON:0001869;4.29e-21;32!UBERON:0002791;6.65e-21;32!UBERON:0003528;1.88e-20;34!UBERON:0002020;1.88e-20;34!UBERON:0002619;3.11e-20;22!UBERON:0001950;1.52e-18;20!UBERON:0000956;8.39e-17;25!UBERON:0000203;8.39e-17;25!UBERON:0000073;2.72e-16;53!UBERON:0002616;2.72e-16;53!UBERON:0007023;1.47e-13;114!UBERON:0000178;9.74e-12;15!UBERON:0000179;9.74e-12;15!UBERON:0000463;9.74e-12;15!UBERON:0001017;4.56e-11;75!UBERON:0000955;7.53e-11;68!UBERON:0002420;4.30e-10;9!UBERON:0007245;4.30e-10;9!UBERON:0010009;4.30e-10;9!UBERON:0010011;4.30e-10;9!UBERON:0000454;4.30e-10;9!UBERON:0001016;4.38e-09;83!UBERON:0000125;1.12e-08;9!UBERON:0002308;1.12e-08;9!UBERON:0009663;3.12e-08;7!UBERON:0000200;2.15e-07;6 | |||
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| ||
|short_description=p3@ATP8A1 | |short_description=p3@ATP8A1 | ||
}} | }} |
Latest revision as of 20:26, 17 September 2015
Short description: | p3@ATP8A1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_ATP8A1_5end |
Coexpression cluster: | C4415_caudate_putamen_cord_Natural_CD8_nucleus_Basophils |
Association with transcript: | 101bp_to_ENST00000264449, ENST00000510289_5end |
EntrezGene: | ATP8A1 |
HGNC: | 13531 |
UniProt: | Q9Y2Q0Q4G1C1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphoid lineage restricted progenitor cell | 4.95e-24 | 52 |
lymphocyte | 2.92e-23 | 53 |
common lymphoid progenitor | 2.92e-23 | 53 |
mature alpha-beta T cell | 1.67e-15 | 18 |
alpha-beta T cell | 1.67e-15 | 18 |
immature T cell | 1.67e-15 | 18 |
mature T cell | 1.67e-15 | 18 |
immature alpha-beta T cell | 1.67e-15 | 18 |
leukocyte | 2.05e-14 | 136 |
T cell | 2.25e-14 | 25 |
pro-T cell | 2.25e-14 | 25 |
hematopoietic cell | 1.91e-13 | 177 |
hematopoietic stem cell | 3.72e-13 | 168 |
CD8-positive, alpha-beta T cell | 1.64e-11 | 11 |
nongranular leukocyte | 5.45e-11 | 115 |
hematopoietic oligopotent progenitor cell | 9.08e-11 | 161 |
hematopoietic multipotent progenitor cell | 9.08e-11 | 161 |
hematopoietic lineage restricted progenitor cell | 5.46e-10 | 120 |
lymphocyte of B lineage | 1.74e-08 | 24 |
pro-B cell | 1.74e-08 | 24 |
B cell | 8.82e-07 | 14 |