FFCP PHASE1:Hg19::chr5:176514413..176514425,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2264 | |EntrezGene=2264 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3691 | |HGNC=3691 | ||
|TSSclassifier=strong | |||
|UniProt=D6R9V0 | |UniProt=D6R9V0 | ||
|association_with_transcript=0bp_to_ENST00000513166_5end | |association_with_transcript=0bp_to_ENST00000513166_5end | ||
|cluster_id=chr5:176514413..176514425,+ | |||
|coexpression_cluster_id=C55 | |||
|description=CAGE_peak_4_at_FGFR4_5end | |description=CAGE_peak_4_at_FGFR4_5end | ||
|id=chr5:176514413..176514425,+ | |id=chr5:176514413..176514425,+ | ||
|ontology_enrichment_celltype=CL:0000181!2.41e-14!12;CL:0000417!2.41e-14!12;CL:0000668!2.41e-14!12;CL:0000414!2.41e-14!12;CL:0000412!2.41e-14!12;CL:0000182!2.41e-14!12;CL:0000223!7.32e-11!59;CL:0000066!6.52e-09!254;CL:0000650!4.39e-07!3;CL:1000618!4.39e-07!3;CL:1001318!4.39e-07!3;CL:0002173!4.39e-07!3;CL:1000500!4.39e-07!3;CL:0002178!4.97e-07!3 | |ontology_enrichment_celltype=CL:0000181!2.41e-14!12;CL:0000417!2.41e-14!12;CL:0000668!2.41e-14!12;CL:0000414!2.41e-14!12;CL:0000412!2.41e-14!12;CL:0000182!2.41e-14!12;CL:0000223!7.32e-11!59;CL:0000066!6.52e-09!254;CL:0000650!4.39e-07!3;CL:1000618!4.39e-07!3;CL:1001318!4.39e-07!3;CL:0002173!4.39e-07!3;CL:1000500!4.39e-07!3;CL:0002178!4.97e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000182;9.89e-46;12!CL:0002253;6.93e-09;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,1.25e-45,12;CL:0000223,2.73e-16,58;CL:0002253,5.49e-09,2;CL:0000066,1.42e-07,253 | |||
|ontology_enrichment_development_v019=UBERON:0004161;6.42e-35;11!UBERON:0009497;1.40e-29;13!UBERON:0003104;4.00e-17;31!UBERON:0001041;7.05e-13;30!CL:0000223;4.33e-09;58 | |||
|ontology_enrichment_disease=DOID:305!1.58e-11!106;DOID:299!8.43e-11!25;DOID:3493!2.11e-10!2;DOID:0050687!1.90e-08!143 | |||
|ontology_enrichment_disease_v019=DOID:3493;4.34e-09;2!DOID:7;9.75e-09;39 | |||
|ontology_enrichment_disease_v019_2=DOID:305,6.80e-11,106;DOID:7,6.96e-10,39;DOID:3493,4.34e-09,2;DOID:0050687,7.53e-08,143 | |||
|ontology_enrichment_uberon=UBERON:0005172!3.22e-18!55;UBERON:0005173!3.22e-18!55;UBERON:0002417!4.59e-16!61;UBERON:0000916!4.59e-16!61;UBERON:0002107!8.50e-12!19;UBERON:0006925!8.50e-12!19;UBERON:0008836!8.50e-12!19;UBERON:0009497!3.01e-11!25;UBERON:0000015!3.01e-11!25;UBERON:0002423!3.01e-11!25;UBERON:0006235!3.01e-11!25;UBERON:0004161!3.01e-11!25;UBERON:0009569!2.04e-10!113;UBERON:0008835!4.76e-10!22;UBERON:0003894!4.76e-10!22;UBERON:0005177!6.05e-10!107;UBERON:0009854!1.44e-09!23;UBERON:0002113!1.45e-09!27;UBERON:0003918!1.45e-09!27;UBERON:0005095!1.45e-09!27;UBERON:0007687!1.45e-09!27;UBERON:0002365!9.36e-09!31;UBERON:0002330!9.36e-09!31;UBERON:0007499!1.01e-08!25;UBERON:0003929!1.09e-08!54;UBERON:0005057!2.40e-08!26;UBERON:0009856!2.40e-08!26;UBERON:0000489!7.05e-08!32;UBERON:0004921!1.54e-07!129;UBERON:0004185!1.54e-07!129;UBERON:0001007!2.50e-07!155;UBERON:0001555!2.50e-07!155;UBERON:0007026!2.50e-07!155;UBERON:0003567!4.39e-07!3;UBERON:0003838!4.39e-07!3;UBERON:0005169!4.39e-07!3;UBERON:0002321!4.39e-07!3;UBERON:0005215!4.39e-07!3;UBERON:0002303!4.39e-07!3;UBERON:0002319!4.39e-07!3;UBERON:0005911!4.57e-07!82;UBERON:0006554!6.71e-07!44;UBERON:0000466!6.96e-07!126;UBERON:0005409!7.01e-07!35 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;7.05e-29;19!UBERON:0006925;7.05e-29;19!UBERON:0002423;6.30e-22;25!UBERON:0002365;3.61e-17;31!UBERON:0002330;3.61e-17;31!UBERON:0002368;3.16e-15;33!UBERON:0005172;1.52e-09;52!UBERON:0005173;1.52e-09;52!UBERON:0000949;2.22e-09;43!UBERON:0002530;1.14e-07;57!UBERON:0002417;1.15e-07;58!UBERON:0000916;1.15e-07;58 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,8.16e-29,19;UBERON:0006925,8.16e-29,19;UBERON:0008836,8.16e-29,19;UBERON:0008835,7.09e-25,22;UBERON:0003894,7.09e-25,22;UBERON:0009854,8.63e-24,23;UBERON:0007499,7.04e-22,25;UBERON:0009497,7.04e-22,25;UBERON:0000015,7.04e-22,25;UBERON:0002423,7.04e-22,25;UBERON:0006235,7.04e-22,25;UBERON:0004161,7.04e-22,25;UBERON:0009856,4.94e-21,26;UBERON:0002365,1.28e-17,31;UBERON:0002330,1.28e-17,31;UBERON:0003929,1.54e-17,54;UBERON:0002368,1.38e-15,35;UBERON:0005172,1.81e-13,54;UBERON:0005173,1.81e-13,54;UBERON:0002530,2.63e-12,59;UBERON:0002417,4.44e-12,60;UBERON:0000916,4.44e-12,60;UBERON:0000949,4.46e-12,45;UBERON:0005911,2.44e-11,82;UBERON:0004921,1.35e-07,118;UBERON:0005177,5.67e-07,101;UBERON:0003104,6.33e-07,160;UBERON:0009142,6.33e-07,160 | |||
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|short_description=p4@FGFR4 | |short_description=p4@FGFR4 | ||
}} | }} |
Latest revision as of 05:35, 17 September 2015
Short description: | p4@FGFR4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_FGFR4_5end |
Coexpression cluster: | C55_hepatocellular_Intestinal_liver_Prostate_fibrosarcoma_Hepatocyte_hepatoblastoma |
Association with transcript: | 0bp_to_ENST00000513166_5end |
EntrezGene: | FGFR4 |
HGNC: | 3691 |
UniProt: | D6R9V0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 1.25e-45 | 12 |
endodermal cell | 2.73e-16 | 58 |
epithelial cell of large intestine | 5.49e-09 | 2 |
epithelial cell | 1.42e-07 | 253 |
Ontology term | p-value | n |
---|---|---|
liver | 8.16e-29 | 19 |
digestive gland | 8.16e-29 | 19 |
liver bud | 8.16e-29 | 19 |
hepatic diverticulum | 7.09e-25 | 22 |
liver primordium | 7.09e-25 | 22 |
digestive tract diverticulum | 8.63e-24 | 23 |
epithelial sac | 7.04e-22 | 25 |
epithelium of foregut-midgut junction | 7.04e-22 | 25 |
anatomical boundary | 7.04e-22 | 25 |
hepatobiliary system | 7.04e-22 | 25 |
foregut-midgut junction | 7.04e-22 | 25 |
septum transversum | 7.04e-22 | 25 |
sac | 4.94e-21 | 26 |
exocrine gland | 1.28e-17 | 31 |
exocrine system | 1.28e-17 | 31 |
gut epithelium | 1.54e-17 | 54 |
endocrine gland | 1.38e-15 | 35 |
abdomen element | 1.81e-13 | 54 |
abdominal segment element | 1.81e-13 | 54 |
gland | 2.63e-12 | 59 |
abdominal segment of trunk | 4.44e-12 | 60 |
abdomen | 4.44e-12 | 60 |
endocrine system | 4.46e-12 | 45 |
endo-epithelium | 2.44e-11 | 82 |
subdivision of digestive tract | 1.35e-07 | 118 |
trunk region element | 5.67e-07 | 101 |
mesenchyme | 6.33e-07 | 160 |
entire embryonic mesenchyme | 6.33e-07 | 160 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 6.80e-11 | 106 |
disease of anatomical entity | 6.96e-10 | 39 |
signet ring cell adenocarcinoma | 4.34e-09 | 2 |
cell type cancer | 7.53e-08 | 143 |