FFCP PHASE1:Hg19::chr1:51435879..51435884,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1031 | |EntrezGene=1031 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1789 | |HGNC=1789 | ||
|TSSclassifier=strong | |||
|UniProt=P42773,Q6ICV4 | |UniProt=P42773,Q6ICV4 | ||
|association_with_transcript=237bp_to_NM_078626,uc001csg.2_5end | |association_with_transcript=237bp_to_NM_078626,uc001csg.2_5end | ||
|cluster_id=chr1:51435879..51435884,+ | |||
|description=CAGE_peak_9_at_CDKN2C_5end | |description=CAGE_peak_9_at_CDKN2C_5end | ||
|id=chr1:51435879..51435884,+ | |id=chr1:51435879..51435884,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000898;4.10e-10;3!CL:0000346;4.10e-10;3!CL:1000428;4.10e-10;3!CL:0000791;1.37e-09;18!CL:0000789;1.37e-09;18!CL:0002419;1.37e-09;18!CL:0000895;3.32e-08;1!CL:0000084;7.73e-07;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000898,3.12e-10,3;CL:0000346,3.42e-10,3;CL:1000428,3.42e-10,3;CL:0000791,1.21e-09,18;CL:0000789,1.21e-09,18;CL:0002420,1.21e-09,18;CL:0002419,1.21e-09,18;CL:0000790,1.21e-09,18;CL:0000810,2.33e-08,1;CL:0000895,2.33e-08,1;CL:0002436,2.33e-08,1;CL:0002427,2.33e-08,1;CL:0002428,2.33e-08,1;CL:0002429,2.33e-08,1;CL:0002433,2.33e-08,1;CL:0002431,2.33e-08,1;CL:0002432,2.33e-08,1;CL:0000084,7.08e-07,25;CL:0000827,7.08e-07,25 | |||
|ontology_enrichment_development_v019=CL:0000790;1.37e-09;18!UBERON:0000358;1.26e-08;1!CL:0002427;3.32e-08;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0000412;4.10e-10;3!UBERON:0001992;4.10e-10;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000412,3.42e-10,3;UBERON:0001992,3.42e-10,3;UBERON:0002370,6.71e-08,4;UBERON:0005058,6.71e-08,4;UBERON:0009113,6.71e-08,4;UBERON:0003295,6.71e-08,4;UBERON:0005562,6.71e-08,4 | |||
|phase1_expression=0.363356758541113,0.428201047781966,0.563817616383885,0,0,0.872338524100369,0,0,0.783556884599516,0,0,0.218441372130172,0,0.37129905888014,0.662794751455832,0,0,0,0,0.123121058076788,0.408001382488506,0,0.286235987131057,0.136874425072884,0.125542639594803,0,0,0.0787107813136792,0.786728553697808,0.383829398097213,0,0,0,0,0.387336002901508,0.284338464974843,0,0,0,0.217010870715852,0,0,0,0.145398238779565,0,0.242584061187816,0,0.411167888021826,0.309706370895104,0,0,0,0,0,0,0,0,0,0,0.320929027076094,0,0.329851300186716,0,0,0,0,0,0,0,0.217188844705117,0,0,0.316462387440884,0,0.425208599930087,0.628975936525128,0,0.450530678524519,0.16072558669708,0.285012743741249,0.19891667719909,0,0,0,0,1.70692089026603,0,0,0,0.954053754535364,0,0,0,0,0,0.526768169550154,0.196709770113833,0.393010762749165,0.411202997999018,1.17030546773475,0,0.946895611469467,1.94826728407911,0.334231370655521,1.47302953737419,1.99380505125259,4.06205795647523,0.512365278902701,0.520237390239513,1.80881695064044,0.829050053357545,2.31842468588042,0.296573126324121,0.535081656179426,1.04535523804977,0.566546713487831,1.53288197440768,0.34362744548263,1.26509846009751,0.637130828648193,1.30216690771284,2.85135613334512,0.301150238155546,0.511946444617674,0,0.473554504088034,2.46338399076314,0.80642697289893,0,0,0,0,0,0.361439152384566,0,0.144846518960824,0.795285947051099,0,0,0,0.087834785693126,0.130979075497713,0,0,0,0,0,0.715471872916026,0.571994910780128,1.48583000531826,0,0,0,0,0,0,0,0,0,0,0.402829317109147,0.760272105718513,0,0,0,0.0892997282840798,0.22452937262617,0,0,0,0,0,0,0,0,0.506522046658319,0,0,0,0,0,0,0,0.134710672069688,0,0.151357427644931,0.576175924479999,0,0,0,0,0,0,0,0,0.122834317311768,0.309977343527296,0,0.247266929278557,0,0,0,0,0,0.877955241761676,0.30648779579902,0.45071417671979,0,0.179389635688862,0.640672166455702,0.211931901159562,0,0.206105058476878,0.515281080091258,0.18611685633159,0,0.194874010322397,0,0.0920498986422993,0.969876340912871,0.355009592516614,0,0,0,0,0,0,0,0,0,0,0,1.56449532329816,1.28648187638577,0,0.464367928031979,0,0.473227200159376,0.337169380156203,0.241011029883482,0.220587945464788,0.217879444092406,0.474541238222193,0.539325232640658,0.98110732562673,0,0,0,0.4115740113314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190254152234598,0,0,0.246217006087397,0,0,0,0,0,0,0,0,0,0.352193736052904,0.414656231081544,0.864719720501769,1.51490920111656,0.063497894292169,0,0,1.71072446022705,0,0.300343057843917,0,0.112131084345361,0,0,0,0,0,0,0,0,0,0.266422179016099,0.428933980974443,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,1.14861935834114,0,0,0.410952645100767,0.179060963239896,0.224170287987055,0.394061520403854,0.215627574859517,0.385029108839245,0,0,0,0,0,0.749007023947182,0,0,0.49076596687656,0.500170521059677,0,0.207970861530807,0.535286966391485,0.788512075169673,0.117141414992713,0.601892199455438,4.5481500811197,0,0,0,0.347534457872331,0.391602314925481,0.343143423810856,0.206768026122887,0.215714200818617,0,0,0,0.604780586659361,0.496215615637554,0.460385919864187,0.280660094433074,0.128139149255701,0.511707249066704,0,0,0,0,0.0821271560138091,0,0.232420756919918,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215915916102139,0,0,0,0,0,0,0,0.261435451024901,0,0,0,0.412164046590889,0.0915694648183434,0.577566499444116,0,0,0,0,0,0,0.275673144969061,0.537101224341368,0,0,0,0,0,0,0,0,0,0,0.308033580176089,0,0,0,0.286249773483982,0,0,0,0,0,0,0.78494864019923,0,0,0.235624804691373,0,0,0,0,0,0,0.272999822815972,0.282810863907425,0,0,0,0,0,0,0,0,0,0,0,0,0,0.422215270595328,0.329294892959902,0,0,0,0,0,0.376575203107117,0,0,0,0,1.01489521846434,0,0,0.476463550915578,1.23408681925858,0.648473311192717,0.540031437238115,0.79312517629427,0.106824071127473,0,0,0,0.432807638929335,0.142283686696828,0.159426272728822,0,0,0.846694330895531,0,0.280797178113459,0.228234679033192,0.156679895773023,0,0.338583555603207,0.1605880751037,0,0.425846237690326,0,0,1.11838053946208,0.500547425135725,0,0,0,0,0.33307196799782,0,0,0,0.242721043499027,0,0.284136146806413,0.23874448473769,0.296964680832639,0,0,0.422008249231538,0.111308705022906,0,0,0.19924798825107,0.276283915531148,0.251932747854276,0.20453736500431,0,0,0,0,0,0.197286811273867,0,0,0,0.278304294485554,0,0,0,0,0.1137934482855,0.254253650292766,0.236387681767936,0,0.291604613383254,0,0,0.120596438625408,0,0.110579259931225,0,0,0.21787692703798,0.139423744278603,0.461701551022782,0.455768223388005,0,0,0.325942115766024,0,0.183195186803725,0,0,0,0.332423363800313,0.225595660617181,0.19606253431774,0.167821586975843,0,0.158936578980379,0.210998064528027,0,0,0,0,0.265372693510018,0,0,0,0.104421949505455,0.134802265961354,0,0.468528891450678,0.364909578431332,0,0,0.394584402849391,0,0.30607276163049,0.126373159256976,0,0.103688191397247,0,0,0,0,0,0.138674673013139,0,0,0,0,0,0.290268993867255,0.292357268344742,0.574808199372465,0.0969890164884194,0,0.677942222341597,0.137041924646751,0.19871461170299,0,0,0.0801588202515337,0.213452994739353,0,0,0.343609788497747,0.171594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| 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| ||
|short_description=p9@CDKN2C | |short_description=p9@CDKN2C | ||
}} | }} |
Latest revision as of 11:15, 18 September 2015
Short description: | p9@CDKN2C |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_CDKN2C_5end |
Coexpression cluster: | NA |
Association with transcript: | 237bp_to_NM_078626, uc001csg.2_5end |
EntrezGene: | CDKN2C |
HGNC: | 1789 |
UniProt: | P42773Q6ICV4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
naive T cell | 3.12e-10 | 3 |
hair follicle dermal papilla cell | 3.42e-10 | 3 |
stem cell of epidermis | 3.42e-10 | 3 |
mature alpha-beta T cell | 1.21e-09 | 18 |
alpha-beta T cell | 1.21e-09 | 18 |
immature T cell | 1.21e-09 | 18 |
mature T cell | 1.21e-09 | 18 |
immature alpha-beta T cell | 1.21e-09 | 18 |
CD4-positive, alpha-beta thymocyte | 2.33e-08 | 1 |
naive thymus-derived CD4-positive, alpha-beta T cell | 2.33e-08 | 1 |
mature CD4 single-positive thymocyte | 2.33e-08 | 1 |
resting double-positive thymocyte | 2.33e-08 | 1 |
double-positive blast | 2.33e-08 | 1 |
CD69-positive double-positive thymocyte | 2.33e-08 | 1 |
CD69-positive, CD4-positive single-positive thymocyte | 2.33e-08 | 1 |
CD4-positive, CD8-intermediate double-positive thymocyte | 2.33e-08 | 1 |
CD24-positive, CD4 single-positive thymocyte | 2.33e-08 | 1 |
T cell | 7.08e-07 | 25 |
pro-T cell | 7.08e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
dermal papilla | 3.42e-10 | 3 |
papillary layer of dermis | 3.42e-10 | 3 |
thymus | 6.71e-08 | 4 |
hemolymphoid system gland | 6.71e-08 | 4 |
thymic region | 6.71e-08 | 4 |
pharyngeal gland | 6.71e-08 | 4 |
thymus primordium | 6.71e-08 | 4 |