FFCP PHASE1:Hg19::chr1:56797895..56797912,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:56797895..56797912,- | |||
|coexpression_cluster_id=C763 | |||
|description=CAGE_peak_at_chr1:56797895..56797912,- | |description=CAGE_peak_at_chr1:56797895..56797912,- | ||
|id=chr1:56797895..56797912,- | |id=chr1:56797895..56797912,- | ||
|ontology_enrichment_celltype=CL:0000945!1.32e-14!24;CL:0000826!1.32e-14!24;CL:0000188!2.01e-13!9;CL:0000080!3.00e-12!6;CL:0002605!7.67e-11!3;CL:0000594!8.06e-11!3;CL:0000064!8.90e-11!3;CL:0005012!8.90e-11!3;CL:0000067!8.90e-11!3;CL:0002304!8.90e-11!3 | |ontology_enrichment_celltype=CL:0000945!1.32e-14!24;CL:0000826!1.32e-14!24;CL:0000188!2.01e-13!9;CL:0000080!3.00e-12!6;CL:0002605!7.67e-11!3;CL:0000594!8.06e-11!3;CL:0000064!8.90e-11!3;CL:0005012!8.90e-11!3;CL:0000067!8.90e-11!3;CL:0002304!8.90e-11!3 | ||
|ontology_enrichment_celltype_v019=CL:0000945;3.63e-13;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,3.63e-13,24;CL:0000826,3.63e-13,24;CL:0000988,4.60e-07,177 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:630!4.89e-09!1;DOID:0050177!4.89e-09!1;DOID:0050427!4.89e-09!1;DOID:2355!1.91e-08!1 | |ontology_enrichment_disease=DOID:630!4.89e-09!1;DOID:0050177!4.89e-09!1;DOID:0050427!4.89e-09!1;DOID:2355!1.91e-08!1 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001778!8.90e-11!3;UBERON:0001775!8.90e-11!3;UBERON:0000488!2.68e-08!4;UBERON:0002331!1.56e-07!10;UBERON:0000358!1.56e-07!10;UBERON:0000307!1.56e-07!10;UBERON:0000091!1.56e-07!10;UBERON:0000087!1.56e-07!10;UBERON:0007806!1.56e-07!10;UBERON:0008780!1.56e-07!10;UBERON:0005728!1.56e-07!10 | |||
|ontology_enrichment_uberon_v019=UBERON:0002331;3.07e-30;10!UBERON:0000178;1.79e-20;15!UBERON:0000179;1.79e-20;15!UBERON:0000463;1.79e-20;15!UBERON:0000478;4.11e-13;24!UBERON:0002390;4.07e-10;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002331,3.07e-30,10;UBERON:0000358,3.07e-30,10;UBERON:0000307,3.07e-30,10;UBERON:0000091,3.07e-30,10;UBERON:0000087,3.07e-30,10;UBERON:0007010,3.07e-30,10;UBERON:0007806,3.07e-30,10;UBERON:0008780,3.07e-30,10;UBERON:0005728,3.07e-30,10;UBERON:0000178,1.79e-20,15;UBERON:0000179,1.79e-20,15;UBERON:0000463,1.79e-20,15;UBERON:0000478,4.11e-13,24 | |||
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|short_description=p@chr1:56797895..56797912,- | |short_description=p@chr1:56797895..56797912,- | ||
}} | }} |
Latest revision as of 09:18, 28 July 2015
Short description: | p@chr1:56797895..56797912, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:56797895..56797912, - |
Coexpression cluster: | C763_cord_B_splenic_xeroderma_b_hairy_mycosis |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 3.63e-13 | 24 |
pro-B cell | 3.63e-13 | 24 |
hematopoietic cell | 4.60e-07 | 177 |
Ontology term | p-value | n |
---|---|---|
umbilical cord | 3.07e-30 | 10 |
blastocyst | 3.07e-30 | 10 |
blastula | 3.07e-30 | 10 |
bilaminar disc | 3.07e-30 | 10 |
inner cell mass | 3.07e-30 | 10 |
cleaving embryo | 3.07e-30 | 10 |
connecting stalk | 3.07e-30 | 10 |
inner cell mass derived epiblast | 3.07e-30 | 10 |
extraembryonic mesoderm | 3.07e-30 | 10 |
blood | 1.79e-20 | 15 |
haemolymphatic fluid | 1.79e-20 | 15 |
organism substance | 1.79e-20 | 15 |
extraembryonic structure | 4.11e-13 | 24 |