FFCP PHASE1:Hg19::chr12:96793134..96793145,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr12:96793134..96793145,+
|short_description=p@chr12:96793134..96793145,+
|description=CAGE_peak_at_chr12:96793134..96793145,+
|association_with_transcript=NA
...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr12:96793134..96793145,+ | |||
|coexpression_cluster_id=C1695 | |||
|description=CAGE_peak_at_chr12:96793134..96793145,+ | |||
|id=chr12:96793134..96793145,+ | |||
|ontology_enrichment_celltype=CL:0000071!1.68e-14!18;CL:0002546!1.68e-14!18;CL:0002139!1.10e-13!24;CL:0000115!2.87e-10!35;CL:1000413!2.35e-09!9;CL:0002078!2.61e-07!44;CL:0002371!3.11e-07!591;CL:0000548!5.27e-07!679;CL:0000004!5.27e-07!679;CL:0000255!5.27e-07!679 | |||
|ontology_enrichment_celltype_v019=CL:0000071;1.26e-39;18!CL:0002139;9.23e-35;24!CL:1000413;1.92e-24;9!CL:0000115;9.37e-23;36!CL:0000623;4.34e-19;3!CL:0002543;6.63e-17;6!CL:0002078;1.05e-14;45!CL:0000213;4.23e-10;58!CL:0000215;4.23e-10;58!CL:0002544;8.30e-10;6!CL:0000094;1.82e-07;8!CL:0000076;5.48e-07;63 | |||
|ontology_enrichment_celltype_v019_2=CL:0000071,3.51e-40,18;CL:0002546,3.51e-40,18;CL:0002139,4.73e-35,24;CL:0000115,1.27e-26,36;CL:1000413,1.01e-24,9;CL:0002078,8.90e-21,45;CL:0000623,1.78e-19,3;CL:0000825,1.78e-19,3;CL:0002543,3.84e-17,6;CL:0000213,1.55e-15,58;CL:0000215,1.55e-15,58;CL:0002544,4.75e-10,6;CL:0000076,5.28e-10,63;CL:0000094,1.58e-07,8;CL:0000222,3.18e-07,121 | |||
|ontology_enrichment_development_v019=CL:0002546;1.26e-39;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3347;8.79e-08;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3347,1.03e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0001986!1.68e-14!18;UBERON:0004638!1.68e-14!18;UBERON:0004852!1.68e-14!18;UBERON:0000487!1.30e-13!22;UBERON:0004872!9.09e-12!84;UBERON:0000055!1.85e-11!69;UBERON:0001981!2.30e-11!60;UBERON:0007500!2.30e-11!60;UBERON:0004537!2.30e-11!60;UBERON:0006965!2.30e-11!60;UBERON:0006914!4.62e-11!25;UBERON:0003914!2.17e-09!118;UBERON:0003915!2.35e-09!9;UBERON:0004700!2.35e-09!9;UBERON:0001917!2.35e-09!9;UBERON:0004535!2.67e-09!110;UBERON:0001637!7.45e-09!42;UBERON:0003509!7.45e-09!42;UBERON:0004572!7.45e-09!42;UBERON:0003081!1.22e-08!216;UBERON:0001009!1.25e-08!113;UBERON:0002049!3.00e-08!79;UBERON:0007798!3.00e-08!79 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;1.26e-39;18!UBERON:0001986;1.26e-39;18!UBERON:0004852;1.26e-39;18!UBERON:0000487;4.70e-32;22!UBERON:0006914;5.80e-28;25!UBERON:0003915;1.92e-24;9!UBERON:0004700;1.92e-24;9!UBERON:0001917;1.92e-24;9!UBERON:0000490;2.03e-19;33!UBERON:0001638;2.56e-11;9!UBERON:0003920;2.56e-11;9!UBERON:0004582;2.56e-11;9!UBERON:0007195;2.34e-07;1!UBERON:0003914;5.55e-07;74!UBERON:0007500;6.35e-07;56!UBERON:0001981;6.35e-07;56!UBERON:0004537;6.35e-07;56 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004638,3.51e-40,18;UBERON:0001986,3.51e-40,18;UBERON:0004852,3.51e-40,18;UBERON:0000487,1.67e-32,22;UBERON:0006914,2.34e-28,25;UBERON:0003915,1.01e-24,9;UBERON:0004700,1.01e-24,9;UBERON:0001917,1.01e-24,9;UBERON:0007500,6.45e-13,59;UBERON:0001981,6.45e-13,59;UBERON:0004537,6.45e-13,59;UBERON:0006965,6.45e-13,59;UBERON:0000055,8.00e-13,68;UBERON:0001638,1.79e-11,9;UBERON:0003920,1.79e-11,9;UBERON:0004582,1.79e-11,9;UBERON:0002049,7.52e-11,78;UBERON:0007798,7.52e-11,78;UBERON:0004872,1.62e-08,83;UBERON:0003914,1.36e-07,117;UBERON:0007195,3.01e-07,1;UBERON:0004535,4.72e-07,109;UBERON:0001009,8.48e-07,112 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.218441372130172,0,0,0,0.672325146451775,0,0,0,0.123121058076788,0,0,0,0.136874425072884,0.125542639594803,0.152826811495903,0.0821005894499457,0.236132343941038,1.18009283054671,0.383829398097213,0.464448369948228,0,0.6024118375565,0,0.309868802321207,0,0.587200878669695,0.553995408531877,0.200544447470142,1.08505435357926,0,0,0,0,0,0,0.232429036905685,0,0.309706370895104,0,0.512321413058201,0,0,0,0,0,0.545812300115692,0,0,0.320929027076094,0,0.329851300186716,0.199463657621632,0.852449501065388,0.580418477257168,0,0.622822248995575,0,0.521482918420201,0.434377689410233,0,0,0,0,0,0.209658645508376,0.22465726229299,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.587237189370939,0,0,0,0,0.196709770113833,1.57204305099666,0.822405995998037,0,0.32592226663359,0,0,0.111410456885174,0,0.221533894583621,0.270803863765016,0,0,0.328875809207352,0.276350017785848,0,0,0.267540828089713,0,0,0.766440987203842,0,1.01207876807801,0,0.651083453856419,0,0,0,0,0,0,1.41124720257313,1.06976078313403,0.868946423296794,0,0.670700859703636,0,0,0,0,0,0,0,0,0.087834785693126,0.0654895377488563,0,0,0,0.174129737299267,0,0,0,0,0.596287222100115,2.58070378531837,0.347140501607594,1.69592382577203,2.93649605346934,1.10047216776027,3.13492449805216,0,0,0,0.805658634218294,0,1.46437234528902,0.367663080345869,1.62028389576352,0.267899184852239,0.22452937262617,1.46394924628319,15.3316637465883,1.89853131913626,2.5648244150257,2.63560834872127,0,0,0,0,0.132409180813219,0.286836620748814,0,0.560677600142307,0,0,0.311211035399766,0.134710672069688,0,0,0,0,0,0,0.149448680551801,0,0.161872944368132,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300476117813194,0.226864366320042,0.179389635688862,0,0.211931901159562,0,0,0.515281080091258,0,0.506328996723799,0,0.252433774244115,0.0920498986422993,0,0.355009592516614,0.10075209822764,0,0.386521706326594,0,0.286804595389004,0,0,0.116193942869518,0,0,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0.237270619111097,0,0,0,0.738155454624648,0,0,0,0,0,0,0,0,0,0.109750285408626,0,0,0.0925884451585296,0,0,0,0,0.117408694235822,1.01056513432752,0.925971025153221,0.380508304469197,0,0,0.246217006087397,0,0,0,0.16798212819886,0.567100388969546,0,0,0,0,0.088048434013226,1.03664057770386,0.864719720501769,1.13618190083742,0,0,0,0,0,0.300343057843917,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0.266422179016099,0.142977993658148,0,0,0.325736184293735,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0,0,0,1.37921532141349,1.94064817373566,2.69520376187472,0,0,0,0,0,1.49801404789436,0,0.414415513436035,0,0,0,0,0.178428988797162,0,0,0,0,0,0,0,0,0,0,0.413536052245775,0.215714200818617,0.640365346820666,0,0,0.30239029332968,0,0.460385919864187,0,0,0,0,0,0.771048469013278,0.887808626565635,0.246381468041427,0,0.348631135379878,0.120859449591622,0.200506470303285,0,0.229628896329213,0.182091168006717,0,0,0,0,0,0.105551628892876,0,0.850468526382578,0.431831832204279,1.54227252690289,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137836572484531,0,0,0.0852266274161009,0.178064071293475,0,0,0.255225424989168,0,0.464845549297286,0,0.6970372701606,0.616067160352178,0,0.869932992075073,0.37064843820784,0,0,0,0,0.255897791311334,0,0,0,0,0,0,0,0,0.421258456238981,0.48763373908959,0.974853958525138,0,0,0,0,0,0,0.438450885253763,0,0,0.202910376962704,0.6196469961995,1.12678241012897,0.430234056612155,0,0.7133421029625,0,0,0,0,0,0,0,1.08890984861323,0,0.43050537267123,0,0,0.229723400206959,0,0,0,0,0,0.648473311192717,0,0,0,0,0.245040215981032,0,0.144269212976445,0,0,0,0.191505370132367,0.423347165447766,0,0,0,0,0,0,0,0,0.425846237690326,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0.852408440419239,0.23874448473769,0,0,0,0,0,0.16480387422676,0,0.398495976502139,0,0,0,0,0,0.269605053441981,0.179021174675609,0,0,0,1.11136990144637,0,0,0,0,0,0,0.1137934482855,0.254253650292766,0,0,0,0.173624994933292,0,0,0,0,0,0,0,0,0,0,0.23056390438806,0,0.108647371922008,0,0.0915975934018623,0,0,0,0,0,0,0.167821586975843,0,0,0,0,0,0,0,0,0.611030144933625,0,0.123563938946503,0.104421949505455,0,0,0,0,0,0,0,0,0,0.126373159256976,0,0,0,0.330991955875499,0,0,0,0,0,0.0979923974143777,0.174118413160805,0,0.171986032471617,0.0967563312890851,0.0730893170861856,0.328461828212837,0,0,0.225980740780532,0.274083849293502,0.596143835108969,0,0.195551382734803,0,0,0,0,0,0.343189995723929,0,0,0,0,0,0.101998217636322,0,0,0,0,0.429765441419957,0.525774708558629,0,0,0,0,0,0,0,0,1.16495949527454,0.0787831823072236,0.0824158583811665,0,0,0.338693328263138,0,0,0.160753148465019,0.137539436597234,0,0,0,0,0,0,0.0524545881349981,0.105600336519406,0.179287339332845,0.383830394638891,0,0.662091970365432,0,1.08599920350743,0,0,0,0,0,0,0,0,0,0,0,0,0.213574825135389,0,0.414239055347196,0,0.197611631897944,0.243585196761792,0,0.544017803369474,0,0,0.327872630709804,0,0,0,0,0,0.110929051536852,0,0,0.124980407962107,0,0,0.235265819698172,0,0,0.447764408660622,0.233713309847224,0,0,0,0,0.228840068396924,0.302461847526478,0.15543720058278,0.147855149989634,0.318593534327405,0,0.310525913752519,0.8294124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| ||
|short_description=p@chr12:96793134..96793145,+ | |||
}} | }} |
Latest revision as of 13:55, 24 July 2015
Short description: | p@chr12:96793134..96793145, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:96793134..96793145, + |
Coexpression cluster: | C1695_Endothelial_Renal_Smooth_Hepatic_Natural_Eosinophils_mesodermal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
blood vessel endothelial cell | 3.51e-40 | 18 |
embryonic blood vessel endothelial progenitor cell | 3.51e-40 | 18 |
endothelial cell of vascular tree | 4.73e-35 | 24 |
endothelial cell | 1.27e-26 | 36 |
endothelial cell of artery | 1.01e-24 | 9 |
meso-epithelial cell | 8.90e-21 | 45 |
natural killer cell | 1.78e-19 | 3 |
pro-NK cell | 1.78e-19 | 3 |
vein endothelial cell | 3.84e-17 | 6 |
lining cell | 1.55e-15 | 58 |
barrier cell | 1.55e-15 | 58 |
aortic endothelial cell | 4.75e-10 | 6 |
squamous epithelial cell | 5.28e-10 | 63 |
granulocyte | 1.58e-07 | 8 |
mesodermal cell | 3.18e-07 | 121 |
Ontology term | p-value | n |
---|---|---|
blood vessel endothelium | 3.51e-40 | 18 |
endothelium | 3.51e-40 | 18 |
cardiovascular system endothelium | 3.51e-40 | 18 |
simple squamous epithelium | 1.67e-32 | 22 |
squamous epithelium | 2.34e-28 | 25 |
endothelial tube | 1.01e-24 | 9 |
arterial system endothelium | 1.01e-24 | 9 |
endothelium of artery | 1.01e-24 | 9 |
epithelial tube open at both ends | 6.45e-13 | 59 |
blood vessel | 6.45e-13 | 59 |
blood vasculature | 6.45e-13 | 59 |
vascular cord | 6.45e-13 | 59 |
vessel | 8.00e-13 | 68 |
vein | 1.79e-11 | 9 |
venous blood vessel | 1.79e-11 | 9 |
venous system | 1.79e-11 | 9 |
vasculature | 7.52e-11 | 78 |
vascular system | 7.52e-11 | 78 |
splanchnic layer of lateral plate mesoderm | 1.62e-08 | 83 |
epithelial tube | 1.36e-07 | 117 |
stroma of bone marrow | 3.01e-07 | 1 |
cardiovascular system | 4.72e-07 | 109 |
circulatory system | 8.48e-07 | 112 |
Ontology term | p-value | n |
---|---|---|
osteosarcoma | 1.03e-07 | 1 |