FFCP PHASE1:Hg19::chr20:10727793..10727802,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr20:10727793..10727802,+ | |||
|coexpression_cluster_id=C441 | |||
|description=CAGE_peak_at_chr20:10727793..10727802,+ | |description=CAGE_peak_at_chr20:10727793..10727802,+ | ||
|id=chr20:10727793..10727802,+ | |id=chr20:10727793..10727802,+ | ||
|ontology_enrichment_celltype=CL:0002159!1.86e-08!13;CL:0002166!2.33e-08!3;CL:0002077!6.67e-08!33 | |ontology_enrichment_celltype=CL:0002159!1.86e-08!13;CL:0002166!2.33e-08!3;CL:0002077!6.67e-08!33 | ||
|ontology_enrichment_celltype_v019=CL:0000222;5.98e-17;1!CL:0002253;3.86e-09;2!CL:0002251;1.68e-07;20 | |||
|ontology_enrichment_celltype_v019_2=CL:0002253,4.02e-09,2;CL:0002251,1.73e-07,20 | |||
|ontology_enrichment_development_v019=UBERON:0009143;1.04e-16;1!UBERON:0008814;7.49e-09;2!UBERON:0010056;7.49e-09;2 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3151;4.72e-17;1!DOID:3149;4.72e-17;1!DOID:3451;3.43e-09;2!DOID:4159;3.43e-09;2!DOID:0060122;3.43e-09;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3151,4.72e-17,1;DOID:3149,4.72e-17,1;DOID:3451,3.43e-09,2;DOID:4159,3.43e-09,2;DOID:0060122,3.43e-09,2 | |||
|ontology_enrichment_uberon=UBERON:0007023!4.73e-17!115;UBERON:0006562!2.03e-07!11;UBERON:0004119!5.41e-07!169;UBERON:0000925!5.41e-07!169;UBERON:0006595!5.41e-07!169 | |||
|ontology_enrichment_uberon_v019=UBERON:0001052;2.74e-16;4!UBERON:0004907;3.13e-13;5!UBERON:0000059;4.38e-13;11!UBERON:0004921;4.69e-09;33!UBERON:0006562;7.49e-09;2!UBERON:0000160;3.19e-08;17!UBERON:0001155;9.36e-08;9!UBERON:0001555;1.28e-07;54 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001052,3.32e-16,4;UBERON:0004907,3.65e-13,5;UBERON:0000059,4.47e-13,11;UBERON:0000160,3.23e-08,17;UBERON:0001155,8.90e-08,9 | |||
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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0.364295288292542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.386521706326594,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0.439001141634502,0,0.201057944823262,0.185176890317059,0,0,0,0,0,0,0,0,0,0,0,0,0,1.87467667973554,0.671928512795438,0.283550194484773,0,0,0,0,0,0,0,0,0.761974731506028,0,0,0,0.102827492703324,0.300343057843917,2.00078502841405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200506470303285,0.0920809889358963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0.650060246036521,0,0,0,0,0,0,0,0,0,0.330569830721956,0,0.255225424989168,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.384888450902048,0,0,0,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.935702702041099,0,0,0,0,0,0,0,0.994147647766298,0,0,0,0,0.19924798825107,0.828851746593443,0,0.102268682502155,0,0,0,0,0,0.197286811273867,0,0,0,0.0927680981618513,0,0,0,0,2.84483620713749,0,0,0,0,0,0,0,0,0,0,0.219385397153973,0,2.78847488557207,0.384751292518985,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.27527055252064,1.99052386215701,0.265372693510018,0,0,0,0,0,0,0,0,0.586993856796269,0,0.789168805698781,0,0,0,0,0,0,0,0,0,0.569219092059585,0,0,0.0979923974143777,0,0.34945333648406,0,0,0,0,2.23074737923365,0,0.451961481561065,0,0,0.0633107959558787,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229160424011684,0,0.199679000498991,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.0882568791692,0.0788057072991982,0.262272940674991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213574825135389,0.314408610199332,0,0,0,0,0.638341257770182,0,0,0,0,0,0,0,0,0,0,0.18628920882415,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.30924491143255,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123935764259002,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,0,2.71330363699803,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0.0634158101939068,0,0,0,0,1.27762427639595,0.535701835878287,0,0,0,0,0,0,0,0.0657727735628491,0,0,0.549451649953598,0,1.12108865325516,0,0,0,0.142953088353313,0,0,0,0,0.207216164163037,0,0,0,0,0,0,0,0,0,0.447421727191169,0,0,0,0,0,0,0,0,0,0.11294608203896,0,0,0,0,0,0,0,0,0,0,0,0.0939839179798536,0.128915775947154,0,0.178553938605658,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227336094654718,0.267964130156178,0,0,0.639701945702943,0,0.0645889098360061,0.248298857183432,0,0.12729431655633,0,1.95945073107265,0.342233301085281,0.606168477131288,0.215166616178029,0,0,0,0,0,0,0.244482888365733,0.406896178315738,0,0.201273793591026,0 | ||
|short_description=p@chr20:10727793..10727802,+ | |short_description=p@chr20:10727793..10727802,+ | ||
}} | }} |
Latest revision as of 11:53, 28 July 2015
Short description: | p@chr20:10727793..10727802, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr20:10727793..10727802, + |
Coexpression cluster: | C441_keratoacanthoma_skin_tongue_esophagus_cervical_salivary_Sebocyte |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of large intestine | 4.02e-09 | 2 |
epithelial cell of alimentary canal | 1.73e-07 | 20 |
Ontology term | p-value | n |
---|---|---|
rectum | 3.32e-16 | 4 |
lower digestive tract | 3.65e-13 | 5 |
large intestine | 4.47e-13 | 11 |
intestine | 3.23e-08 | 17 |
colon | 8.90e-08 | 9 |
Ontology term | p-value | n |
---|---|---|
skin squamous cell carcinoma | 4.72e-17 | 1 |
keratoacanthoma | 4.72e-17 | 1 |
skin carcinoma | 3.43e-09 | 2 |
skin cancer | 3.43e-09 | 2 |
integumentary system cancer | 3.43e-09 | 2 |