FFCP PHASE1:Hg19::chr6:148514651..148514662,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr6:148514651..148514662,+ | |||
|coexpression_cluster_id=C2847 | |||
|description=CAGE_peak_at_chr6:148514651..148514662,+ | |description=CAGE_peak_at_chr6:148514651..148514662,+ | ||
|id=chr6:148514651..148514662,+ | |id=chr6:148514651..148514662,+ | ||
|ontology_enrichment_celltype=CL:0002623!1.29e-11!3;CL:0000349!1.98e-11!3;CL:0002577!1.98e-11!3;CL:0000159!1.47e-07!2;CL:0002537!2.85e-07!5;CL:0000622!4.06e-07!5 | |ontology_enrichment_celltype=CL:0002623!1.29e-11!3;CL:0000349!1.98e-11!3;CL:0002577!1.98e-11!3;CL:0000159!1.47e-07!2;CL:0002537!2.85e-07!5;CL:0000622!4.06e-07!5 | ||
|ontology_enrichment_celltype_v019=CL:0002623;2.81e-21;3!CL:0000622;3.54e-13;5!CL:0002537;4.96e-13;5!CL:0000154;3.85e-11;6!CL:0000349;9.54e-08;19!CL:0000150;1.00e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002623,3.63e-21,3;CL:0000622,4.13e-13,5;CL:0002537,5.27e-13,5;CL:0000154,4.37e-11,6;CL:0000349,9.21e-08,19;CL:0000150,1.09e-07,9 | |||
|ontology_enrichment_development_v019=UBERON:0009143;8.85e-17;1!UBERON:0008814;4.70e-09;2!UBERON:0010056;4.70e-09;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:6193;4.72e-17;1!DOID:3350;3.43e-09;2 | |||
|ontology_enrichment_disease_v019_2=DOID:6193,4.72e-17,1;DOID:3350,3.43e-09,2 | |||
|ontology_enrichment_uberon=UBERON:0005631!5.08e-19!14;UBERON:0000158!5.08e-19!14;UBERON:0005795!3.91e-17!22;UBERON:0000995!7.48e-15!21;UBERON:0004175!1.15e-14!25;UBERON:0001987!1.37e-14!4;UBERON:0004340!1.37e-14!4;UBERON:0003975!4.39e-14!22;UBERON:0003124!2.61e-12!7;UBERON:0000478!2.27e-10!24;UBERON:0003100!1.53e-09!41;UBERON:0003134!3.98e-09!37;UBERON:0000474!3.98e-09!37;UBERON:0000305!1.50e-08!7;UBERON:0003133!8.07e-08!48;UBERON:0006562!9.32e-08!11;UBERON:0000166!1.38e-07!21;UBERON:0004871!1.77e-07!8;UBERON:0000078!8.72e-07!18 | |||
|ontology_enrichment_uberon_v019=UBERON:0007029;8.85e-17;1!UBERON:0002372;2.08e-16;1!UBERON:0001961;2.08e-16;1!UBERON:0001744;2.08e-16;1!UBERON:0001042;2.08e-16;1!UBERON:0001735;2.08e-16;1!UBERON:0001044;3.85e-11;6!UBERON:0003293;3.85e-11;6!UBERON:0003294;3.85e-11;6!UBERON:0010047;3.85e-11;6!UBERON:0003408;3.85e-11;6!UBERON:0000167;3.85e-11;6!UBERON:0001041;1.81e-10;14!UBERON:0000305;1.41e-09;7!UBERON:0000165;5.08e-09;28!UBERON:0006562;7.21e-09;2!UBERON:0000161;8.38e-08;19!UBERON:0000166;8.38e-08;19!UBERON:0005631;5.76e-07;10!UBERON:0000158;5.76e-07;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007029,6.47e-17,1;UBERON:0002372,3.07e-16,1;UBERON:0001961,3.07e-16,1;UBERON:0001744,3.07e-16,1;UBERON:0001735,3.07e-16,1;UBERON:0000166,2.34e-11,22;UBERON:0001044,4.37e-11,6;UBERON:0003293,4.37e-11,6;UBERON:0003294,4.37e-11,6;UBERON:0010047,4.37e-11,6;UBERON:0000167,4.37e-11,6;UBERON:0005631,2.46e-10,14;UBERON:0000158,2.46e-10,14;UBERON:0000305,1.47e-09,7;UBERON:0000165,1.11e-08,29;UBERON:0000930,1.11e-08,29;UBERON:0004871,1.78e-08,8;UBERON:0000161,4.87e-07,36;UBERON:0001042,5.11e-07,10;UBERON:0009145,5.11e-07,10;UBERON:0003408,5.26e-07,10 | |||
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| ||
|short_description=p@chr6:148514651..148514662,+ | |short_description=p@chr6:148514651..148514662,+ | ||
}} | }} |
Latest revision as of 20:41, 30 July 2015
Short description: | p@chr6:148514651..148514662, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr6:148514651..148514662, + |
Coexpression cluster: | C2847_epithelioid_cervical_esophagus_tongue_Placental_salivary_acantholytic |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
acinar cell of salivary gland | 3.63e-21 | 3 |
acinar cell | 4.13e-13 | 5 |
amnion mesenchymal stem cell | 5.27e-13 | 5 |
protein secreting cell | 4.37e-11 | 6 |
extraembryonic cell | 9.21e-08 | 19 |
glandular epithelial cell | 1.09e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
surface | 6.47e-17 | 1 |
tonsil | 3.07e-16 | 1 |
mucosa-associated lymphoid tissue | 3.07e-16 | 1 |
lymphoid tissue | 3.07e-16 | 1 |
tonsillar ring | 3.07e-16 | 1 |
oral opening | 2.34e-11 | 22 |
saliva-secreting gland | 4.37e-11 | 6 |
gland of oral region | 4.37e-11 | 6 |
gland of foregut | 4.37e-11 | 6 |
oral gland | 4.37e-11 | 6 |
oral cavity | 4.37e-11 | 6 |
extraembryonic membrane | 2.46e-10 | 14 |
membranous layer | 2.46e-10 | 14 |
amnion | 1.47e-09 | 7 |
mouth | 1.11e-08 | 29 |
stomodeum | 1.11e-08 | 29 |
somatic layer of lateral plate mesoderm | 1.78e-08 | 8 |
orifice | 4.87e-07 | 36 |
chordate pharynx | 5.11e-07 | 10 |
pharyngeal region of foregut | 5.11e-07 | 10 |
gland of gut | 5.26e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
epithelioid sarcoma | 4.72e-17 | 1 |
mesenchymal cell neoplasm | 3.43e-09 | 2 |