FFCP PHASE1:Hg19::chr2:211090089..211090121,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=33 | |EntrezGene=33 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=88 | |HGNC=88 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=49bp_to_ENST00000498120_5end | |association_with_transcript=49bp_to_ENST00000498120_5end | ||
|cluster_id=chr2:211090089..211090121,- | |||
|coexpression_cluster_id=C1499 | |||
|description=CAGE_peak_1_at_ACADL_5end | |description=CAGE_peak_1_at_ACADL_5end | ||
|id=chr2:211090089..211090121,- | |id=chr2:211090089..211090121,- | ||
|ontology_enrichment_celltype=CL:0000136!4.70e-08!15 | |ontology_enrichment_celltype=CL:0000136!4.70e-08!15 | ||
|ontology_enrichment_celltype_v019=CL:0000136;3.24e-17;13!CL:0002334;3.24e-08;12!CL:0002615;1.38e-07;3!CL:0002580;1.79e-07;3!CL:0002579;6.54e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000136,1.36e-14,15;CL:0002334,3.01e-08,12;CL:0002615,1.43e-07,3;CL:0002580,1.92e-07,3;CL:0002579,5.41e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.44e-51!115;UBERON:0001049!7.91e-24!57;UBERON:0005068!7.91e-24!57;UBERON:0006241!7.91e-24!57;UBERON:0007135!7.91e-24!57;UBERON:0003075!8.90e-22!86;UBERON:0007284!8.90e-22!86;UBERON:0002346!5.65e-20!90;UBERON:0002616!1.91e-18!59;UBERON:0003080!3.19e-18!42;UBERON:0002780!2.81e-17!41;UBERON:0001890!2.81e-17!41;UBERON:0006240!2.81e-17!41;UBERON:0005743!1.71e-16!86;UBERON:0001017!4.24e-16!82;UBERON:0000073!3.98e-15!94;UBERON:0001016!3.98e-15!94;UBERON:0003056!4.39e-15!61;UBERON:0001893!4.54e-15!34;UBERON:0002020!7.89e-15!34;UBERON:0003528!7.89e-15!34;UBERON:0002791!1.55e-14!33;UBERON:0000955!3.23e-14!69;UBERON:0006238!3.23e-14!69;UBERON:0001869!9.62e-14!32;UBERON:0000475!1.78e-12!365;UBERON:0000153!3.85e-12!129;UBERON:0007811!3.85e-12!129;UBERON:0000956!4.86e-12!25;UBERON:0000203!4.86e-12!25;UBERON:0000481!1.80e-11!347;UBERON:0000062!3.73e-11!511;UBERON:0000033!9.78e-11!123;UBERON:0001950!1.08e-10!20;UBERON:0002619!1.22e-10!22;UBERON:0000477!4.06e-10!286;UBERON:0004121!8.14e-10!169;UBERON:0000064!1.09e-09!219;UBERON:0004111!1.11e-09!241;UBERON:0000025!1.92e-09!194;UBERON:0000924!3.60e-09!173;UBERON:0006601!3.60e-09!173;UBERON:0000468!1.17e-08!659;UBERON:0000922!6.97e-08!612;UBERON:0002050!2.37e-07!605;UBERON:0005423!2.37e-07!605;UBERON:0000063!3.48e-07!97;UBERON:0002298!3.62e-07!8;UBERON:0003688!4.43e-07!6;UBERON:0002358!4.43e-07!6;UBERON:0003684!4.43e-07!6;UBERON:0001178!4.43e-07!6;UBERON:0000467!4.59e-07!625;UBERON:0000923!4.61e-07!604;UBERON:0005291!4.61e-07!604;UBERON:0006598!4.61e-07!604;UBERON:0002532!4.61e-07!604;UBERON:0000483!4.92e-07!309;UBERON:0000480!5.53e-07!626;UBERON:0003076!8.02e-07!15;UBERON:0003057!8.02e-07!15;UBERON:0000119!9.52e-07!312 | |||
|ontology_enrichment_uberon_v019=UBERON:0003688;7.82e-13;6!UBERON:0002358;7.82e-13;6!UBERON:0003684;7.82e-13;6!UBERON:0001178;7.82e-13;6!UBERON:0004457;5.02e-11;9!UBERON:0000042;5.02e-11;9!UBERON:0000310;5.32e-08;10!UBERON:0007023;6.25e-08;114!UBERON:0001443;3.38e-07;11!UBERON:0006947;6.54e-07;3!UBERON:0004054;6.54e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,6.36e-30,114;UBERON:0003688,6.69e-13,6;UBERON:0002358,6.69e-13,6;UBERON:0003684,6.69e-13,6;UBERON:0001178,6.69e-13,6;UBERON:0009569,2.38e-09,112;UBERON:0000310,5.47e-08,10;UBERON:0004457,5.70e-08,12;UBERON:0000042,5.70e-08,12;UBERON:0001443,3.47e-07,11;UBERON:0002530,3.59e-07,59;UBERON:0006947,7.15e-07,3;UBERON:0004054,7.15e-07,3;UBERON:0002417,8.80e-07,60;UBERON:0000916,8.80e-07,60 | |||
|phase1_expression=3.63356758541113,3.21150785836475,3.80576891059122,2.00146596706261,2.68176656656373,2.61701557230111,0,0,0.261185628199839,0.737201809504527,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0,0.286235987131057,0.273748850145768,0.376627918784408,0,0,0,0,0,0,0,0,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.579386075843295,0,0,0.283604451492204,0.443458794925128,0.263504357079378,1.89919659471683,0,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.872188104285069,0,0,0,0.286836620748814,0,0,0,0,0.311211035399766,0,0,0,0,0.234321431833797,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0,0,0,0,0,0.168776332241266,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252320850875628,0.36497735907583,0,0,0,0,0,0.236613600079688,0,0,0.330881918197182,0,0,0.134831308160164,0.196221465125346,0,0,0,0,0,16.478154526838,8.84544495009863,10.6342183202653,0,0,0.171567810298526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141775097242386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0.099972991182057,0,0,0,0,0,0,0.434343920002738,0.205476322550383,0,0,0,0,0,0.508189248444927,0,0,0.502548796003046,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30239029332968,2.72918588600655,6.44540287809862,1.12264037773229,1.66580894032411,2.04682899626681,1.93024705372329,5.93672265779964,0,0,0,0,0,0,0,0.0920809889358963,0,0,0,0,0.15403067420883,0,0,0,0,0,0,0,0,0,0.509752546090077,0,0,0,0,0,0,0.650756789328606,6.59462474545423,1.00726411300178,0.907604499126468,0,0,0,0.096670718292122,0,0,0,0,0,0,0.267096106940212,0,0,0.255225424989168,0.2023155617111,0,0,0,0.308033580176089,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354761064070598,0.211107635297664,0,0,0,0.0962221127255121,0,0,6.40177845282098,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.24873719888493,0,0,0,0,0,0.921482106297696,1.9882952955326,0.562677665642051,0,0,0,10.1616474008046,1.10513566212459,0,0,0,0,0,0,0,0.295930216910801,0,0,0,0.278304294485554,0,0,0,7.24999575434793,0,0,0.472775363535873,0,0,0.173624994933292,0,0.964771509003264,0,0.774054819518572,0.295547618953547,1.53569778007781,0,0,1.53900517007594,0,0,0,0.108647371922008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,0.530745387020035,0,0,0,0,1.07841812769083,0.802577647298789,0,0,0.19566461893209,0,1.57833761139756,0,1.83643656978294,6.57140428136275,0.150323419414493,0.72581733978073,0,0,0,0,0,0,0.173559738335131,0,0,2.62090002363045,0,0,0.0730893170861856,0,0.775912131907355,0,0.677942222341597,0,0,0.569797163602908,1.95551382734803,0.320635281006135,1.28071796843612,0.19980960958213,0.288180834308212,0,0,0,0.372757606696298,1.17847017308398,0,0,0,0,0,0.821432273351958,0,0.429765441419957,0,1.67569440763353,6.18733144831546,0.717873024576814,2.1964690054889,0,0.446342914883745,2.08268764708851,0,0,0.0787831823072236,0,0,0,0,0,0.953423842781029,0,0,0,0,1.5476039091159,0.485996453264197,0,6.85609653503024,2.62272940674991,0,0.35857467866569,0,1.42939065274673,0,0,0,0,0,0,0,0,0,6.30174604815755,2.65013777824443,0.258565912723101,0.52893040697076,1.36869470307464,0,6.0868825163586,4.08731193259131,8.28478110694391,0,0,0,0,13.0564272808674,17.0469127935436,20.5251536431519,19.6723578425883,0,0.886068179966986,0.732157589411779,0.3755727921195,2.29363678276028,1.77486482458964,0.869349641179368,0,0,0,0.285465333544967,0,0,0,0,0.233713309847224,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.398095888698616,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.345430341731199,0,0.691292180758654,0,0,0,0,0.245772908753719,0,0,0.320075189082423,0,0,0,0,0,0.383683113910955,0,0,0,0,0,0,0,0,0,0,0,0,0.449604575675217,0,0.159633859057151,0.82046545696302,1.00828678488687,0.207471757392654,1.45328081068666,2.85538840518309,0,0,0,0,0,0,1.79024599904647,2.18109952212846,0,3.12605604493237,0,0,0.147856086217045,0.405225507710368,0.781078098613847,0.206686796501184,0.317079050969534,0.546974809018219,10.9651553371436,3.47347824872506,0,0.638812138197976,0,1.00885116665647,2.42786241694653,2.27662191351298,0.620916591138472,0,0,0.339848664884159,0.197318320688547,0,0,4.55259938532981,0.942693539496011,0,1.82631744101899,0.863710364874486,0,1.85839014859306,0,0,0.347716544605159,0,0,0,1.38251932362818,4.30227358820278,0,0,1.27016115057279,1.8328549483524,0,0,0,0,0.121917924982269,3.88457302312737,3.18254701254366,0,2.91426595835484,0.233939463462106,0,0,0.11294608203896,0,0.150962843566674,0.0771741581079447,0,0,0.735444965261716,0,2.55201007249429,0.891139200981258,2.113278637917,0,0,0,0,0,0,0,0,4.58729283404541,0.716697915757256,1.10440093535229,0.135982980381829,1.74540276136151,0.5290268405154,0,0.462175628631418,0,0,0,0,0,0,0,0,2.80381183407486,0.535928260312357,0.829169439458779,0.517164979309476,5.33084954752452,1.90451545170992,0.387533459016037,1.48979314310059,0,10.3744867993409,3.03175783437329,3.04803447055746,0.684466602170562,0.202056159043763,2.438554983351,1.33064142618405,0.569822880276821,0,0,0.0898252021065869,0,0.611207220914332,0.813792356631477,2.66302709674205,3.8242020782295,0 | |phase1_expression=3.63356758541113,3.21150785836475,3.80576891059122,2.00146596706261,2.68176656656373,2.61701557230111,0,0,0.261185628199839,0.737201809504527,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0,0.286235987131057,0.273748850145768,0.376627918784408,0,0,0,0,0,0,0,0,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.579386075843295,0,0,0.283604451492204,0.443458794925128,0.263504357079378,1.89919659471683,0,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.872188104285069,0,0,0,0.286836620748814,0,0,0,0,0.311211035399766,0,0,0,0,0.234321431833797,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0,0,0,0,0,0.168776332241266,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252320850875628,0.36497735907583,0,0,0,0,0,0.236613600079688,0,0,0.330881918197182,0,0,0.134831308160164,0.196221465125346,0,0,0,0,0,16.478154526838,8.84544495009863,10.6342183202653,0,0,0.171567810298526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141775097242386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0.099972991182057,0,0,0,0,0,0,0.434343920002738,0.205476322550383,0,0,0,0,0,0.508189248444927,0,0,0.502548796003046,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30239029332968,2.72918588600655,6.44540287809862,1.12264037773229,1.66580894032411,2.04682899626681,1.93024705372329,5.93672265779964,0,0,0,0,0,0,0,0.0920809889358963,0,0,0,0,0.15403067420883,0,0,0,0,0,0,0,0,0,0.509752546090077,0,0,0,0,0,0,0.650756789328606,6.59462474545423,1.00726411300178,0.907604499126468,0,0,0,0.096670718292122,0,0,0,0,0,0,0.267096106940212,0,0,0.255225424989168,0.2023155617111,0,0,0,0.308033580176089,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354761064070598,0.211107635297664,0,0,0,0.0962221127255121,0,0,6.40177845282098,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.24873719888493,0,0,0,0,0,0.921482106297696,1.9882952955326,0.562677665642051,0,0,0,10.1616474008046,1.10513566212459,0,0,0,0,0,0,0,0.295930216910801,0,0,0,0.278304294485554,0,0,0,7.24999575434793,0,0,0.472775363535873,0,0,0.173624994933292,0,0.964771509003264,0,0.774054819518572,0.295547618953547,1.53569778007781,0,0,1.53900517007594,0,0,0,0.108647371922008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,0.530745387020035,0,0,0,0,1.07841812769083,0.802577647298789,0,0,0.19566461893209,0,1.57833761139756,0,1.83643656978294,6.57140428136275,0.150323419414493,0.72581733978073,0,0,0,0,0,0,0.173559738335131,0,0,2.62090002363045,0,0,0.0730893170861856,0,0.775912131907355,0,0.677942222341597,0,0,0.569797163602908,1.95551382734803,0.320635281006135,1.28071796843612,0.19980960958213,0.288180834308212,0,0,0,0.372757606696298,1.17847017308398,0,0,0,0,0,0.821432273351958,0,0.429765441419957,0,1.67569440763353,6.18733144831546,0.717873024576814,2.1964690054889,0,0.446342914883745,2.08268764708851,0,0,0.0787831823072236,0,0,0,0,0,0.953423842781029,0,0,0,0,1.5476039091159,0.485996453264197,0,6.85609653503024,2.62272940674991,0,0.35857467866569,0,1.42939065274673,0,0,0,0,0,0,0,0,0,6.30174604815755,2.65013777824443,0.258565912723101,0.52893040697076,1.36869470307464,0,6.0868825163586,4.08731193259131,8.28478110694391,0,0,0,0,13.0564272808674,17.0469127935436,20.5251536431519,19.6723578425883,0,0.886068179966986,0.732157589411779,0.3755727921195,2.29363678276028,1.77486482458964,0.869349641179368,0,0,0,0.285465333544967,0,0,0,0,0.233713309847224,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.398095888698616,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.345430341731199,0,0.691292180758654,0,0,0,0,0.245772908753719,0,0,0.320075189082423,0,0,0,0,0,0.383683113910955,0,0,0,0,0,0,0,0,0,0,0,0,0.449604575675217,0,0.159633859057151,0.82046545696302,1.00828678488687,0.207471757392654,1.45328081068666,2.85538840518309,0,0,0,0,0,0,1.79024599904647,2.18109952212846,0,3.12605604493237,0,0,0.147856086217045,0.405225507710368,0.781078098613847,0.206686796501184,0.317079050969534,0.546974809018219,10.9651553371436,3.47347824872506,0,0.638812138197976,0,1.00885116665647,2.42786241694653,2.27662191351298,0.620916591138472,0,0,0.339848664884159,0.197318320688547,0,0,4.55259938532981,0.942693539496011,0,1.82631744101899,0.863710364874486,0,1.85839014859306,0,0,0.347716544605159,0,0,0,1.38251932362818,4.30227358820278,0,0,1.27016115057279,1.8328549483524,0,0,0,0,0.121917924982269,3.88457302312737,3.18254701254366,0,2.91426595835484,0.233939463462106,0,0,0.11294608203896,0,0.150962843566674,0.0771741581079447,0,0,0.735444965261716,0,2.55201007249429,0.891139200981258,2.113278637917,0,0,0,0,0,0,0,0,4.58729283404541,0.716697915757256,1.10440093535229,0.135982980381829,1.74540276136151,0.5290268405154,0,0.462175628631418,0,0,0,0,0,0,0,0,2.80381183407486,0.535928260312357,0.829169439458779,0.517164979309476,5.33084954752452,1.90451545170992,0.387533459016037,1.48979314310059,0,10.3744867993409,3.03175783437329,3.04803447055746,0.684466602170562,0.202056159043763,2.438554983351,1.33064142618405,0.569822880276821,0,0,0.0898252021065869,0,0.611207220914332,0.813792356631477,2.66302709674205,3.8242020782295,0 | ||
|short_description=p1@ACADL | |short_description=p1@ACADL | ||
}} | }} |
Latest revision as of 21:53, 19 September 2015
Short description: | p1@ACADL |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ACADL_5end |
Coexpression cluster: | C1499_mature_Hepatocyte_lung_aorta_heart_pancreas_thyroid |
Association with transcript: | 49bp_to_ENST00000498120_5end |
EntrezGene: | ACADL |
HGNC: | 88 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 1.36e-14 | 15 |
preadipocyte | 3.01e-08 | 12 |
adipocyte of omentum tissue | 1.43e-07 | 3 |
preadipocyte of the breast | 1.92e-07 | 3 |
omentum preadipocyte | 5.41e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
adult organism | 6.36e-30 | 114 |
omentum | 6.69e-13 | 6 |
peritoneum | 6.69e-13 | 6 |
abdominal cavity | 6.69e-13 | 6 |
visceral peritoneum | 6.69e-13 | 6 |
subdivision of trunk | 2.38e-09 | 112 |
breast | 5.47e-08 | 10 |
cavity lining | 5.70e-08 | 12 |
serous membrane | 5.70e-08 | 12 |
chest | 3.47e-07 | 11 |
gland | 3.59e-07 | 59 |
male genital duct | 7.15e-07 | 3 |
internal male genitalia | 7.15e-07 | 3 |
abdominal segment of trunk | 8.80e-07 | 60 |
abdomen | 8.80e-07 | 60 |