FFCP PHASE1:Hg19::chr2:211542948..211542962,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:211542948..211542962,+ | |||
|coexpression_cluster_id=C768 | |||
|description=CAGE_peak_at_chr2:211542948..211542962,+ | |description=CAGE_peak_at_chr2:211542948..211542962,+ | ||
|id=chr2:211542948..211542962,+ | |id=chr2:211542948..211542962,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0008947;9.62e-23;29 | |||
|ontology_enrichment_disease=DOID:305!3.37e-07!106 | |ontology_enrichment_disease=DOID:305!3.37e-07!106 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:305,8.00e-12,106;DOID:0050687,5.08e-08,143 | |||
|ontology_enrichment_uberon=UBERON:0001737!9.96e-15!9;UBERON:0004119!1.62e-09!169;UBERON:0000925!1.62e-09!169;UBERON:0006595!1.62e-09!169;UBERON:0001007!1.37e-07!155;UBERON:0001555!1.37e-07!155;UBERON:0007026!1.37e-07!155;UBERON:0004921!2.36e-07!129;UBERON:0004185!2.36e-07!129;UBERON:0002107!6.14e-07!19;UBERON:0006925!6.14e-07!19;UBERON:0008836!6.14e-07!19;UBERON:0009497!7.29e-07!25;UBERON:0000015!7.29e-07!25;UBERON:0002423!7.29e-07!25;UBERON:0006235!7.29e-07!25;UBERON:0004161!7.29e-07!25;UBERON:0008835!7.95e-07!22;UBERON:0003894!7.95e-07!22 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;1.63e-62;9!UBERON:0001557;1.63e-62;9!UBERON:0000072;4.40e-16;37!UBERON:0000065;3.10e-13;44!UBERON:0002423;1.30e-09;25!UBERON:0002107;3.58e-09;19!UBERON:0006925;3.58e-09;19 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,1.47e-62,9;UBERON:0001557,6.22e-29,19;UBERON:0008947,5.81e-17,38;UBERON:0003258,5.81e-17,38;UBERON:0001041,2.25e-15,87;UBERON:0004921,8.86e-14,118;UBERON:0000072,2.18e-13,47;UBERON:0001007,4.61e-12,145;UBERON:0001555,4.61e-12,145;UBERON:0007026,4.61e-12,145;UBERON:0004119,5.33e-12,160;UBERON:0000925,5.33e-12,160;UBERON:0006595,5.33e-12,160;UBERON:0000065,1.98e-11,54;UBERON:0009497,1.27e-09,25;UBERON:0000015,1.27e-09,25;UBERON:0002423,1.27e-09,25;UBERON:0006235,1.27e-09,25;UBERON:0004161,1.27e-09,25;UBERON:0002107,3.48e-09,19;UBERON:0006925,3.48e-09,19;UBERON:0008836,3.48e-09,19;UBERON:0001048,3.84e-08,160;UBERON:0008835,6.72e-08,22;UBERON:0003894,6.72e-08,22;UBERON:0001004,6.97e-08,74;UBERON:0009854,1.52e-07,23;UBERON:0007499,6.39e-07,25 | |||
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| ||
|short_description=p@chr2:211542948..211542962,+ | |short_description=p@chr2:211542948..211542962,+ | ||
}} | }} |
Latest revision as of 05:45, 29 July 2015
Short description: | p@chr2:211542948..211542962, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:211542948..211542962, + |
Coexpression cluster: | C768_Hepatocyte_liver_cervical_Hep2_epitheloid_large_nonsmall |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
larynx | 1.47e-62 | 9 |
upper respiratory tract | 6.22e-29 | 19 |
respiratory primordium | 5.81e-17 | 38 |
endoderm of foregut | 5.81e-17 | 38 |
foregut | 2.25e-15 | 87 |
subdivision of digestive tract | 8.86e-14 | 118 |
segment of respiratory tract | 2.18e-13 | 47 |
digestive system | 4.61e-12 | 145 |
digestive tract | 4.61e-12 | 145 |
primitive gut | 4.61e-12 | 145 |
endoderm-derived structure | 5.33e-12 | 160 |
endoderm | 5.33e-12 | 160 |
presumptive endoderm | 5.33e-12 | 160 |
respiratory tract | 1.98e-11 | 54 |
epithelium of foregut-midgut junction | 1.27e-09 | 25 |
anatomical boundary | 1.27e-09 | 25 |
hepatobiliary system | 1.27e-09 | 25 |
foregut-midgut junction | 1.27e-09 | 25 |
septum transversum | 1.27e-09 | 25 |
liver | 3.48e-09 | 19 |
digestive gland | 3.48e-09 | 19 |
liver bud | 3.48e-09 | 19 |
primordium | 3.84e-08 | 160 |
hepatic diverticulum | 6.72e-08 | 22 |
liver primordium | 6.72e-08 | 22 |
respiratory system | 6.97e-08 | 74 |
digestive tract diverticulum | 1.52e-07 | 23 |
epithelial sac | 6.39e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 8.00e-12 | 106 |
cell type cancer | 5.08e-08 | 143 |