FFCP PHASE1:Hg19::chr2:216582819..216582824,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=53bp_to_ENST00000415479_5end | |association_with_transcript=53bp_to_ENST00000415479_5end | ||
|cluster_id=chr2:216582819..216582824,+ | |||
|description=CAGE_peak_1_at_ENST00000415479_5end | |description=CAGE_peak_1_at_ENST00000415479_5end | ||
|id=chr2:216582819..216582824,+ | |id=chr2:216582819..216582824,+ | ||
|ontology_enrichment_celltype=CL:0000055!7.05e-26!180;CL:0002494!1.61e-14!16;CL:0000057!2.70e-14!75;CL:0000187!1.67e-12!54;CL:0000183!1.95e-12!59;CL:0000393!2.06e-12!60;CL:0000211!2.06e-12!60;CL:0000680!2.28e-11!57;CL:0000056!2.28e-11!57;CL:0000355!2.28e-11!57;CL:0000048!6.72e-11!430;CL:0000723!2.49e-10!436;CL:0000034!1.33e-09!444;CL:0002334!1.77e-09!12;CL:0002548!5.39e-09!6;CL:0000359!7.05e-09!32;CL:0002570!2.15e-08!8;CL:0000192!4.58e-07!42;CL:0000514!4.58e-07!42;CL:0000136!7.77e-07!15 | |ontology_enrichment_celltype=CL:0000055!7.05e-26!180;CL:0002494!1.61e-14!16;CL:0000057!2.70e-14!75;CL:0000187!1.67e-12!54;CL:0000183!1.95e-12!59;CL:0000393!2.06e-12!60;CL:0000211!2.06e-12!60;CL:0000680!2.28e-11!57;CL:0000056!2.28e-11!57;CL:0000355!2.28e-11!57;CL:0000048!6.72e-11!430;CL:0000723!2.49e-10!436;CL:0000034!1.33e-09!444;CL:0002334!1.77e-09!12;CL:0002548!5.39e-09!6;CL:0000359!7.05e-09!32;CL:0002570!2.15e-08!8;CL:0000192!4.58e-07!42;CL:0000514!4.58e-07!42;CL:0000136!7.77e-07!15 | ||
|ontology_enrichment_celltype_v019=CL:0002570;2.75e-18;8!CL:0002494;8.92e-18;16!CL:0002548;9.18e-14;6!CL:0002594;2.64e-12;4!CL:0002580;4.07e-10;3!CL:0000062;4.31e-09;9!CL:0002334;9.38e-09;12!CL:1000306;7.64e-08;4!CL:0002547;7.64e-08;4!CL:0000569;1.89e-07;4!CL:0002617;9.19e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002570,3.55e-18,8;CL:0002494,8.45e-18,16;CL:0002548,8.61e-14,6;CL:0002594,2.56e-12,4;CL:0000048,1.10e-11,427;CL:0000723,2.43e-11,433;CL:0000034,6.73e-11,441;CL:0000062,1.82e-10,11;CL:0000375,1.82e-10,11;CL:0000335,1.82e-10,11;CL:0002580,3.27e-10,3;CL:0000057,4.75e-09,76;CL:0002334,8.06e-09,12;CL:1000306,8.59e-08,4;CL:0002547,8.59e-08,4;CL:0000134,1.03e-07,354;CL:0000569,1.87e-07,4;CL:0000011,1.87e-07,4;CL:0002320,2.30e-07,361;CL:0000219,3.02e-07,386;CL:0002617,7.90e-07,2 | |||
|ontology_enrichment_development_v019=CL:0000335;1.79e-10;11!CL:0000011;1.89e-07;4 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000948!1.36e-12!24;UBERON:0005498!1.36e-12!24;UBERON:0004140!1.36e-12!24;UBERON:0009881!1.36e-12!24;UBERON:0004141!1.36e-12!24;UBERON:0003084!1.36e-12!24;UBERON:0007005!1.36e-12!24;UBERON:0004139!1.36e-12!24;UBERON:0004291!1.36e-12!24;UBERON:0004872!5.42e-12!84;UBERON:0007100!8.31e-12!27;UBERON:0002385!5.86e-11!63;UBERON:0001015!5.86e-11!63;UBERON:0000383!5.86e-11!63;UBERON:0001134!8.73e-11!61;UBERON:0002036!8.73e-11!61;UBERON:0003082!8.73e-11!61;UBERON:0004535!1.19e-10!110;UBERON:0001009!1.24e-10!113;UBERON:0004290!1.21e-09!70;UBERON:0000914!6.25e-09!83;UBERON:0002329!6.25e-09!83;UBERON:0003077!6.25e-09!83;UBERON:0003059!6.25e-09!83;UBERON:0007282!6.25e-09!83;UBERON:0009618!6.25e-09!83;UBERON:0007285!6.25e-09!83;UBERON:0001013!2.96e-08!14;UBERON:0001637!5.70e-08!42;UBERON:0003509!5.70e-08!42;UBERON:0004572!5.70e-08!42;UBERON:0003688!1.25e-07!6;UBERON:0002358!1.25e-07!6;UBERON:0003684!1.25e-07!6;UBERON:0001178!1.25e-07!6;UBERON:0000486!1.57e-07!82;UBERON:0002049!3.06e-07!79;UBERON:0007798!3.06e-07!79;UBERON:0003914!5.56e-07!118;UBERON:0001981!7.93e-07!60;UBERON:0007500!7.93e-07!60;UBERON:0004537!7.93e-07!60;UBERON:0006965!7.93e-07!60 | |||
|ontology_enrichment_uberon_v019=UBERON:0001013;3.05e-13;14!UBERON:0000948;2.36e-12;22!UBERON:0001310;2.64e-12;4!UBERON:0007100;1.27e-10;25!UBERON:0004797;7.64e-08;4!UBERON:0000415;7.64e-08;4!UBERON:0007240;7.64e-08;4!UBERON:0005742;7.64e-08;4!UBERON:0005734;7.64e-08;4!UBERON:0004664;7.64e-08;4!UBERON:0004663;7.64e-08;4!UBERON:0000310;1.96e-07;10!UBERON:0000078;3.28e-07;2!UBERON:0002012;3.28e-07;2!UBERON:0008886;3.28e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000948,3.17e-16,24;UBERON:0005498,3.17e-16,24;UBERON:0004140,3.17e-16,24;UBERON:0009881,3.17e-16,24;UBERON:0004141,3.17e-16,24;UBERON:0003084,3.17e-16,24;UBERON:0007005,3.17e-16,24;UBERON:0004139,3.17e-16,24;UBERON:0004291,3.17e-16,24;UBERON:0007100,4.08e-14,27;UBERON:0001013,3.56e-13,14;UBERON:0001310,2.56e-12,4;UBERON:0004872,4.24e-11,83;UBERON:0004535,3.85e-08,109;UBERON:0002384,4.70e-08,371;UBERON:0000415,8.59e-08,4;UBERON:0007240,8.59e-08,4;UBERON:0005742,8.59e-08,4;UBERON:0005734,8.59e-08,4;UBERON:0004664,8.59e-08,4;UBERON:0004663,8.59e-08,4;UBERON:0001009,8.67e-08,112;UBERON:0000310,1.65e-07,10;UBERON:0000078,3.55e-07,2;UBERON:0007497,3.55e-07,2;UBERON:0003643,3.55e-07,2;UBERON:0003504,3.55e-07,2;UBERON:0003469,3.55e-07,2;UBERON:0003496,3.55e-07,2;UBERON:0002012,3.55e-07,2;UBERON:0008886,3.55e-07,2;UBERON:0007303,3.55e-07,2;UBERON:0002061,3.55e-07,2;UBERON:0005432,3.55e-07,2;UBERON:0004363,3.55e-07,2;UBERON:0001443,8.58e-07,11 | |||
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| ||
|short_description=p1@ENST00000415479 | |short_description=p1@ENST00000415479 | ||
}} | }} |
Latest revision as of 06:20, 29 July 2015
Short description: | p1@ENST00000415479 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000415479_5end |
Coexpression cluster: | NA |
Association with transcript: | 53bp_to_ENST00000415479_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesenchymal stem cell of adipose | 3.55e-18 | 8 |
cardiocyte | 8.45e-18 | 16 |
cardiac fibroblast | 8.61e-14 | 6 |
smooth muscle cell of the umbilical artery | 2.56e-12 | 4 |
multi fate stem cell | 1.10e-11 | 427 |
somatic stem cell | 2.43e-11 | 433 |
stem cell | 6.73e-11 | 441 |
osteoblast | 1.82e-10 | 11 |
osteoprogenitor cell | 1.82e-10 | 11 |
mesenchyme condensation cell | 1.82e-10 | 11 |
preadipocyte of the breast | 3.27e-10 | 3 |
fibroblast | 4.75e-09 | 76 |
preadipocyte | 8.06e-09 | 12 |
fibroblast of tunica adventitia of artery | 8.59e-08 | 4 |
fibroblast of the aortic adventitia | 8.59e-08 | 4 |
mesenchymal cell | 1.03e-07 | 354 |
cardiac mesenchymal cell | 1.87e-07 | 4 |
migratory trunk neural crest cell | 1.87e-07 | 4 |
connective tissue cell | 2.30e-07 | 361 |
motile cell | 3.02e-07 | 386 |
adipocyte of breast | 7.90e-07 | 2 |