FFCP PHASE1:Hg19::chr3:37493590..37493607,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3680 | |EntrezGene=3680 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6145 | |HGNC=6145 | ||
|TSSclassifier=strong | |||
|UniProt=E9PDS3 | |UniProt=E9PDS3 | ||
|association_with_transcript=0bp_to_ENST00000422441_5end | |association_with_transcript=0bp_to_ENST00000422441_5end | ||
|cluster_id=chr3:37493590..37493607,+ | |||
|coexpression_cluster_id=C4327 | |||
|description=CAGE_peak_2_at_ITGA9_5end | |description=CAGE_peak_2_at_ITGA9_5end | ||
|id=chr3:37493590..37493607,+ | |id=chr3:37493590..37493607,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0004872;7.09e-08;7!UBERON:0006603;2.57e-07;65!UBERON:0003104;8.89e-07;31 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!4.99e-46!115;UBERON:0001049!1.42e-20!57;UBERON:0005068!1.42e-20!57;UBERON:0006241!1.42e-20!57;UBERON:0007135!1.42e-20!57;UBERON:0001017!3.97e-18!82;UBERON:0003080!4.79e-18!42;UBERON:0005743!2.45e-17!86;UBERON:0002780!3.07e-17!41;UBERON:0001890!3.07e-17!41;UBERON:0006240!3.07e-17!41;UBERON:0002616!7.93e-16!59;UBERON:0000073!1.32e-15!94;UBERON:0001016!1.32e-15!94;UBERON:0000955!1.93e-14!69;UBERON:0006238!1.93e-14!69;UBERON:0001893!5.00e-14!34;UBERON:0002020!9.78e-14!34;UBERON:0003528!9.78e-14!34;UBERON:0002791!2.08e-13!33;UBERON:0003075!2.12e-13!86;UBERON:0007284!2.12e-13!86;UBERON:0001869!2.90e-13!32;UBERON:0002346!5.66e-12!90;UBERON:0000956!4.78e-11!25;UBERON:0000203!4.78e-11!25;UBERON:0002619!2.05e-10!22;UBERON:0003056!1.27e-09!61;UBERON:0001950!1.69e-09!20;UBERON:0000062!9.17e-08!511;UBERON:0004121!6.48e-07!169;UBERON:0003135!7.63e-07!11;UBERON:0000468!9.93e-07!659 | |ontology_enrichment_uberon=UBERON:0007023!4.99e-46!115;UBERON:0001049!1.42e-20!57;UBERON:0005068!1.42e-20!57;UBERON:0006241!1.42e-20!57;UBERON:0007135!1.42e-20!57;UBERON:0001017!3.97e-18!82;UBERON:0003080!4.79e-18!42;UBERON:0005743!2.45e-17!86;UBERON:0002780!3.07e-17!41;UBERON:0001890!3.07e-17!41;UBERON:0006240!3.07e-17!41;UBERON:0002616!7.93e-16!59;UBERON:0000073!1.32e-15!94;UBERON:0001016!1.32e-15!94;UBERON:0000955!1.93e-14!69;UBERON:0006238!1.93e-14!69;UBERON:0001893!5.00e-14!34;UBERON:0002020!9.78e-14!34;UBERON:0003528!9.78e-14!34;UBERON:0002791!2.08e-13!33;UBERON:0003075!2.12e-13!86;UBERON:0007284!2.12e-13!86;UBERON:0001869!2.90e-13!32;UBERON:0002346!5.66e-12!90;UBERON:0000956!4.78e-11!25;UBERON:0000203!4.78e-11!25;UBERON:0002619!2.05e-10!22;UBERON:0003056!1.27e-09!61;UBERON:0001950!1.69e-09!20;UBERON:0000062!9.17e-08!511;UBERON:0004121!6.48e-07!169;UBERON:0003135!7.63e-07!11;UBERON:0000468!9.93e-07!659 | ||
|ontology_enrichment_uberon_v019=UBERON:0007023;3.28e-14;114!UBERON:0002780;1.38e-09;41!UBERON:0001890;1.38e-09;41!UBERON:0003135;4.50e-09;11!UBERON:0002619;5.45e-09;22!UBERON:0001869;6.17e-09;32!UBERON:0000922;7.67e-09;49!UBERON:0001893;9.73e-09;34!UBERON:0001950;1.10e-08;20!UBERON:0003528;3.38e-08;34!UBERON:0002020;3.38e-08;34!UBERON:0002791;9.04e-08;32!UBERON:0000956;1.58e-07;25!UBERON:0000203;1.58e-07;25!UBERON:0000073;7.43e-07;53!UBERON:0002616;7.43e-07;53 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.82e-53,114;UBERON:0002780,9.89e-13,41;UBERON:0001890,9.89e-13,41;UBERON:0003080,9.89e-13,41;UBERON:0006240,9.89e-13,41;UBERON:0001049,3.67e-12,56;UBERON:0005068,3.67e-12,56;UBERON:0006241,3.67e-12,56;UBERON:0007135,3.67e-12,56;UBERON:0001017,6.52e-12,81;UBERON:0000073,5.26e-11,53;UBERON:0002616,5.26e-11,53;UBERON:0011216,5.46e-11,223;UBERON:0001016,1.96e-10,89;UBERON:0001893,3.29e-10,34;UBERON:0001869,4.47e-10,32;UBERON:0000955,5.33e-10,68;UBERON:0006238,5.33e-10,68;UBERON:0003075,4.38e-09,82;UBERON:0007284,4.38e-09,82;UBERON:0003135,4.99e-09,11;UBERON:0002619,5.21e-09,22;UBERON:0003528,5.22e-09,34;UBERON:0002020,5.22e-09,34;UBERON:0002791,7.57e-09,32;UBERON:0001950,9.03e-09,20;UBERON:0002346,2.85e-08,86;UBERON:0010314,1.29e-07,132;UBERON:0000956,1.52e-07,25;UBERON:0000203,1.52e-07,25;UBERON:0003056,2.39e-07,61;UBERON:0010371,3.08e-07,104 | |||
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| ||
|short_description=p2@ITGA9 | |short_description=p2@ITGA9 | ||
}} | }} |
Latest revision as of 02:33, 18 September 2015
Short description: | p2@ITGA9 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_ITGA9_5end |
Coexpression cluster: | C4327_Mast_heart_spleen_aorta_penis_thyroid_CD34 |
Association with transcript: | 0bp_to_ENST00000422441_5end |
EntrezGene: | ITGA9 |
HGNC: | 6145 |
UniProt: | E9PDS3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 1.82e-53 | 114 |
regional part of forebrain | 9.89e-13 | 41 |
forebrain | 9.89e-13 | 41 |
anterior neural tube | 9.89e-13 | 41 |
future forebrain | 9.89e-13 | 41 |
neural tube | 3.67e-12 | 56 |
neural rod | 3.67e-12 | 56 |
future spinal cord | 3.67e-12 | 56 |
neural keel | 3.67e-12 | 56 |
central nervous system | 6.52e-12 | 81 |
regional part of nervous system | 5.26e-11 | 53 |
regional part of brain | 5.26e-11 | 53 |
organ system subdivision | 5.46e-11 | 223 |
nervous system | 1.96e-10 | 89 |
telencephalon | 3.29e-10 | 34 |
cerebral hemisphere | 4.47e-10 | 32 |
brain | 5.33e-10 | 68 |
future brain | 5.33e-10 | 68 |
neural plate | 4.38e-09 | 82 |
presumptive neural plate | 4.38e-09 | 82 |
male reproductive organ | 4.99e-09 | 11 |
regional part of cerebral cortex | 5.21e-09 | 22 |
brain grey matter | 5.22e-09 | 34 |
gray matter | 5.22e-09 | 34 |
regional part of telencephalon | 7.57e-09 | 32 |
neocortex | 9.03e-09 | 20 |
neurectoderm | 2.85e-08 | 86 |
structure with developmental contribution from neural crest | 1.29e-07 | 132 |
cerebral cortex | 1.52e-07 | 25 |
pallium | 1.52e-07 | 25 |
pre-chordal neural plate | 2.39e-07 | 61 |
ecto-epithelium | 3.08e-07 | 104 |