FFCP PHASE1:Hg19::chr4:169418264..169418278,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23022 | |EntrezGene=23022 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17068 | |HGNC=17068 | ||
|TSSclassifier=strong | |||
|UniProt=D6R948 | |UniProt=D6R948 | ||
|association_with_transcript=0bp_to_ENST00000511948_5end | |association_with_transcript=0bp_to_ENST00000511948_5end | ||
|cluster_id=chr4:169418264..169418278,+ | |||
|description=CAGE_peak_21_at_PALLD_5end | |description=CAGE_peak_21_at_PALLD_5end | ||
|id=chr4:169418264..169418278,+ | |id=chr4:169418264..169418278,+ | ||
|ontology_enrichment_celltype=CL:0000188!1.33e-18!9;CL:0000594!3.13e-11!3;CL:0000035!6.28e-08!20 | |ontology_enrichment_celltype=CL:0000188!1.33e-18!9;CL:0000594!3.13e-11!3;CL:0000035!6.28e-08!20 | ||
|ontology_enrichment_celltype_v019=CL:0000188;1.55e-10;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000188,1.63e-10,9 | |||
|ontology_enrichment_development_v019=UBERON:0004140;1.31e-11;1!UBERON:0010227;4.22e-11;1!UBERON:0005062;4.68e-11;4!UBERON:0007284;4.68e-11;4!UBERON:0003104;9.16e-08;31 | |||
|ontology_enrichment_disease=DOID:114!1.86e-08!2 | |||
|ontology_enrichment_disease_v019=DOID:178;4.22e-11;1!DOID:326;4.22e-11;1!DOID:3978;4.22e-11;1!DOID:3394;4.22e-11;1!DOID:5844;4.22e-11;1 | |||
|ontology_enrichment_disease_v019_2=DOID:178,2.96e-11,1;DOID:326,2.96e-11,1;DOID:3978,2.96e-11,1;DOID:3394,2.96e-11,1;DOID:5844,2.96e-11,1 | |||
|ontology_enrichment_uberon=UBERON:0003978!5.02e-12!3;UBERON:0009751!5.02e-12!3;UBERON:0000946!5.02e-12!3;UBERON:0002523!5.02e-12!3;UBERON:0005983!5.02e-12!3;UBERON:0002165!5.02e-12!3;UBERON:0002062!5.02e-12!3;UBERON:0007280!5.02e-12!3;UBERON:0001630!7.66e-09!2;UBERON:0005090!7.66e-09!2;UBERON:0002133!1.61e-08!2;UBERON:0002081!2.49e-08!2;UBERON:0003127!7.01e-08!2;UBERON:0007100!1.33e-07!27;UBERON:0001134!4.19e-07!61;UBERON:0002036!4.19e-07!61;UBERON:0003082!4.19e-07!61;UBERON:0002385!8.57e-07!63;UBERON:0001015!8.57e-07!63;UBERON:0000383!8.57e-07!63 | |ontology_enrichment_uberon=UBERON:0003978!5.02e-12!3;UBERON:0009751!5.02e-12!3;UBERON:0000946!5.02e-12!3;UBERON:0002523!5.02e-12!3;UBERON:0005983!5.02e-12!3;UBERON:0002165!5.02e-12!3;UBERON:0002062!5.02e-12!3;UBERON:0007280!5.02e-12!3;UBERON:0001630!7.66e-09!2;UBERON:0005090!7.66e-09!2;UBERON:0002133!1.61e-08!2;UBERON:0002081!2.49e-08!2;UBERON:0003127!7.01e-08!2;UBERON:0007100!1.33e-07!27;UBERON:0001134!4.19e-07!61;UBERON:0002036!4.19e-07!61;UBERON:0003082!4.19e-07!61;UBERON:0002385!8.57e-07!63;UBERON:0001015!8.57e-07!63;UBERON:0000383!8.57e-07!63 | ||
|ontology_enrichment_uberon_v019=UBERON:0001134;5.99e-30;16!UBERON:0002036;5.99e-30;16!UBERON:0005090;1.98e-21;2!UBERON:0001630;1.98e-21;2!UBERON:0002385;7.02e-15;31!UBERON:0001015;7.02e-15;31!UBERON:0000383;7.02e-15;31!UBERON:0003978;1.98e-14;3!UBERON:0000946;1.98e-14;3!UBERON:0001723;3.27e-14;3!UBERON:0001033;3.27e-14;3!UBERON:0007100;6.49e-14;25!UBERON:0001389;1.01e-11;1!UBERON:0000026;1.01e-11;1!UBERON:0008784;1.01e-11;1!UBERON:0006058;1.01e-11;1!UBERON:0003663;1.01e-11;1!UBERON:0004256;1.01e-11;1!UBERON:0004708;1.01e-11;1!UBERON:0002101;1.01e-11;1!UBERON:0004709;1.01e-11;1!UBERON:0002529;1.01e-11;1!UBERON:0010538;1.01e-11;1!UBERON:0003661;1.01e-11;1!UBERON:0010890;1.01e-11;1!UBERON:0002471;1.01e-11;1!UBERON:0001383;1.01e-11;1!UBERON:0010758;1.01e-11;1!UBERON:0010707;1.01e-11;1!UBERON:0000978;1.01e-11;1!UBERON:0002103;1.01e-11;1!UBERON:0001665;1.01e-11;1!UBERON:0003823;1.01e-11;1!UBERON:0000154;1.01e-11;1!UBERON:0010709;1.01e-11;1!UBERON:0002135;1.45e-11;1!UBERON:0002426;1.78e-11;1!UBERON:0003831;1.78e-11;1!UBERON:0003898;1.78e-11;1!UBERON:0004830;1.78e-11;1!UBERON:0003830;1.78e-11;1!UBERON:0005175;1.78e-11;1!UBERON:0001774;1.78e-11;1!UBERON:0001103;1.78e-11;1!UBERON:0002146;2.42e-11;1!UBERON:0005623;2.42e-11;1!UBERON:0002079;4.22e-11;1!UBERON:0000948;1.62e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005090,2.08e-21,2;UBERON:0001630,2.08e-21,2;UBERON:0003978,1.85e-14,3;UBERON:0009751,1.85e-14,3;UBERON:0000946,1.85e-14,3;UBERON:0002523,1.85e-14,3;UBERON:0005983,1.85e-14,3;UBERON:0002165,1.85e-14,3;UBERON:0002062,1.85e-14,3;UBERON:0007280,1.85e-14,3;UBERON:0001723,3.87e-14,3;UBERON:0001033,3.87e-14,3;UBERON:0010056,3.87e-14,3;UBERON:0007100,6.75e-13,27;UBERON:0005418,9.57e-12,1;UBERON:0001389,9.57e-12,1;UBERON:0000026,9.57e-12,1;UBERON:0008784,9.57e-12,1;UBERON:0006058,9.57e-12,1;UBERON:0003663,9.57e-12,1;UBERON:0004256,9.57e-12,1;UBERON:0004708,9.57e-12,1;UBERON:0002101,9.57e-12,1;UBERON:0004709,9.57e-12,1;UBERON:0002529,9.57e-12,1;UBERON:0010538,9.57e-12,1;UBERON:0003661,9.57e-12,1;UBERON:0010890,9.57e-12,1;UBERON:0002471,9.57e-12,1;UBERON:0001383,9.57e-12,1;UBERON:0004357,9.57e-12,1;UBERON:0004347,9.57e-12,1;UBERON:0005420,9.57e-12,1;UBERON:0005732,9.57e-12,1;UBERON:0010758,9.57e-12,1;UBERON:0010707,9.57e-12,1;UBERON:0000978,9.57e-12,1;UBERON:0002103,9.57e-12,1;UBERON:0001665,9.57e-12,1;UBERON:0003823,9.57e-12,1;UBERON:0000154,9.57e-12,1;UBERON:0010709,9.57e-12,1;UBERON:0005733,9.57e-12,1;UBERON:0005730,9.57e-12,1;UBERON:0002135,1.45e-11,1;UBERON:0002426,1.97e-11,1;UBERON:0003831,1.97e-11,1;UBERON:0003898,1.97e-11,1;UBERON:0004830,1.97e-11,1;UBERON:0003830,1.97e-11,1;UBERON:0005175,1.97e-11,1;UBERON:0001774,1.97e-11,1;UBERON:0001103,1.97e-11,1;UBERON:0010084,1.97e-11,1;UBERON:0002146,2.18e-11,1;UBERON:0005623,2.18e-11,1;UBERON:0002079,4.91e-11,1;UBERON:0003103,2.10e-08,68;UBERON:0001134,3.22e-07,62;UBERON:0002036,3.22e-07,62;UBERON:0003082,3.22e-07,62;UBERON:0002385,5.69e-07,64;UBERON:0001015,5.69e-07,64;UBERON:0000383,5.69e-07,64;UBERON:0000948,6.72e-07,24;UBERON:0005498,6.72e-07,24;UBERON:0004140,6.72e-07,24;UBERON:0009881,6.72e-07,24;UBERON:0004141,6.72e-07,24;UBERON:0003084,6.72e-07,24;UBERON:0007005,6.72e-07,24;UBERON:0004139,6.72e-07,24;UBERON:0004291,6.72e-07,24 | |||
|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125118519871964,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47008711385542,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.468008530278475,0.148631162288728,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0,0.537182889719687,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.686286847621712,0,0,0,0,0,0,0,0,0,0.768834895534206,0,0,0,0,0,0,0,0,0,0,0,0,0.182091168006717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.7281556097497,21.8650174789558,0,0,0,0.676695028044854,0,0.15350367472613,1.24052915236078,0.322260734604821,0.290033387828457,1.78975917573812,14.6012538460649,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343505344755765,0,0.223676107892416,0.500547425135725,0,0,0,0,0,0,0,0.293016358543788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216388639742091,0,0,0,0,0,0,0,4.01288823649394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.30636562417283,3.66656678418694,0.717873024576814,1.99679000498991,0.858452096273142,1.78537165953498,9.27131920316822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.42939065274673,0,0,0,0,0,0,0,0.681552087141687,0,0,0,0,0,0,0,0.106787412567695,0,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.80033317595784,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.762764190934334,0,0.198916222116275,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.869291361512897,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.8908632553216,3.38787262625615,3.4794432940146,0.485710993059139,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4226557275834,0,0,0,0,0,0,0,0,0.458729283404541,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.66645102024618,0,0,0,0.0636471582781649,0.202117188958219,1.30630048738177,4.44903291410865,0.202056159043763,0.215166616178029,0.665320713092027,0,0.213454691755431,0,0,0,0,0,0,0,0 | |phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125118519871964,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47008711385542,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.468008530278475,0.148631162288728,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0,0.537182889719687,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.686286847621712,0,0,0,0,0,0,0,0,0,0.768834895534206,0,0,0,0,0,0,0,0,0,0,0,0,0.182091168006717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.7281556097497,21.8650174789558,0,0,0,0.676695028044854,0,0.15350367472613,1.24052915236078,0.322260734604821,0.290033387828457,1.78975917573812,14.6012538460649,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343505344755765,0,0.223676107892416,0.500547425135725,0,0,0,0,0,0,0,0.293016358543788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216388639742091,0,0,0,0,0,0,0,4.01288823649394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.30636562417283,3.66656678418694,0.717873024576814,1.99679000498991,0.858452096273142,1.78537165953498,9.27131920316822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.42939065274673,0,0,0,0,0,0,0,0.681552087141687,0,0,0,0,0,0,0,0.106787412567695,0,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.80033317595784,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.762764190934334,0,0.198916222116275,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.869291361512897,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.8908632553216,3.38787262625615,3.4794432940146,0.485710993059139,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4226557275834,0,0,0,0,0,0,0,0,0.458729283404541,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.66645102024618,0,0,0,0.0636471582781649,0.202117188958219,1.30630048738177,4.44903291410865,0.202056159043763,0.215166616178029,0.665320713092027,0,0.213454691755431,0,0,0,0,0,0,0,0 | ||
|short_description=p21@PALLD | |short_description=p21@PALLD | ||
}} | }} |
Latest revision as of 16:20, 16 September 2015
Short description: | p21@PALLD |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_21_at_PALLD_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000511948_5end |
EntrezGene: | PALLD |
HGNC: | 17068 |
UniProt: | D6R948 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cell of skeletal muscle | 1.63e-10 | 9 |
Ontology term | p-value | n |
---|---|---|
vascular disease | 2.96e-11 | 1 |
ischemia | 2.96e-11 | 1 |
extrinsic cardiomyopathy | 2.96e-11 | 1 |
myocardial ischemia | 2.96e-11 | 1 |
myocardial infarction | 2.96e-11 | 1 |