FFCP PHASE1:Hg19::chr4:71522035..71522046,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr4:71522035..71522046,- | |||
|coexpression_cluster_id=C394 | |||
|description=CAGE_peak_at_chr4:71522035..71522046,- | |description=CAGE_peak_at_chr4:71522035..71522046,- | ||
|id=chr4:71522035..71522046,- | |id=chr4:71522035..71522046,- | ||
|ontology_enrichment_celltype=CL:0000945!7.87e-24!24;CL:0000826!7.87e-24!24;CL:0000236!9.90e-24!14;CL:0000542!3.70e-10!53;CL:0000051!3.70e-10!53;CL:0000838!5.11e-09!52 | |ontology_enrichment_celltype=CL:0000945!7.87e-24!24;CL:0000826!7.87e-24!24;CL:0000236!9.90e-24!14;CL:0000542!3.70e-10!53;CL:0000051!3.70e-10!53;CL:0000838!5.11e-09!52 | ||
|ontology_enrichment_celltype_v019=CL:0000236;4.72e-23;13!CL:0000945;9.53e-16;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0000236,2.45e-21,14;CL:0000945,8.89e-16,24;CL:0000826,8.89e-16,24 | |||
|ontology_enrichment_development_v019=UBERON:0006595;1.74e-08;86!UBERON:0001045;2.70e-08;1!UBERON:0006298;3.09e-08;1!UBERON:0008801;3.80e-08;1!UBERON:0005754;4.66e-08;1!UBERON:0009143;1.22e-07;1!UBERON:0006242;1.22e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!8.21e-24!115;UBERON:0001829!1.21e-07!2;UBERON:0000341!6.84e-07!2 | |ontology_enrichment_uberon=UBERON:0007023!8.21e-24!115;UBERON:0001829!1.21e-07!2;UBERON:0000341!6.84e-07!2 | ||
|ontology_enrichment_uberon_v019=UBERON:0001829;1.10e-14;2!UBERON:0004921;6.92e-13;33!UBERON:0001044;9.15e-11;6!UBERON:0003293;9.15e-11;6!UBERON:0003294;9.15e-11;6!UBERON:0010047;9.15e-11;6!UBERON:0003408;9.15e-11;6!UBERON:0000167;9.15e-11;6!UBERON:0001154;2.70e-08;1!UBERON:0001153;2.70e-08;1!UBERON:0009854;2.70e-08;1!UBERON:0001736;3.09e-08;1!UBERON:0001831;3.80e-08;1!UBERON:0001567;3.80e-08;1!UBERON:0000998;4.66e-08;1!UBERON:0006868;4.66e-08;1!UBERON:0002171;6.09e-08;1!UBERON:0006518;6.09e-08;1!UBERON:0008949;6.09e-08;1!UBERON:0000101;6.09e-08;1!UBERON:0002167;6.09e-08;1!UBERON:0001041;8.67e-08;14!UBERON:0002372;1.22e-07;1!UBERON:0000029;1.22e-07;1!UBERON:0001961;1.22e-07;1!UBERON:0001744;1.22e-07;1!UBERON:0001042;1.22e-07;1!UBERON:0001735;1.22e-07;1!UBERON:0001155;2.14e-07;9!UBERON:0001555;3.71e-07;54 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,6.53e-19,114;UBERON:0001829,1.10e-14,2;UBERON:0001044,9.46e-11,6;UBERON:0003293,9.46e-11,6;UBERON:0003294,9.46e-11,6;UBERON:0010047,9.46e-11,6;UBERON:0000167,9.46e-11,6;UBERON:0001154,2.70e-08,1;UBERON:0001153,2.70e-08,1;UBERON:0001045,2.70e-08,1;UBERON:0001736,3.10e-08,1;UBERON:0006298,3.10e-08,1;UBERON:0001831,3.80e-08,1;UBERON:0001567,3.80e-08,1;UBERON:0008801,3.80e-08,1;UBERON:0000998,4.35e-08,1;UBERON:0006868,4.35e-08,1;UBERON:0004921,4.53e-08,118;UBERON:0002171,6.97e-08,1;UBERON:0006518,6.97e-08,1;UBERON:0008949,6.97e-08,1;UBERON:0000101,6.97e-08,1;UBERON:0002167,6.97e-08,1;UBERON:0000029,7.45e-08,1;UBERON:0002372,1.87e-07,1;UBERON:0001961,1.87e-07,1;UBERON:0001744,1.87e-07,1;UBERON:0001735,1.87e-07,1;UBERON:0001155,2.14e-07,9;UBERON:0000166,3.16e-07,22;UBERON:0001007,4.02e-07,145;UBERON:0001555,4.02e-07,145;UBERON:0007026,4.02e-07,145 | |||
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| ||
|short_description=p@chr4:71522035..71522046,- | |short_description=p@chr4:71522035..71522046,- | ||
}} | }} |
Latest revision as of 06:24, 30 July 2015
Short description: | p@chr4:71522035..71522046, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr4:71522035..71522046, - |
Coexpression cluster: | C394_submaxillary_small_colon_throat_appendix_tonsil_trachea |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
B cell | 2.45e-21 | 14 |
lymphocyte of B lineage | 8.89e-16 | 24 |
pro-B cell | 8.89e-16 | 24 |
Ontology term | p-value | n |
---|---|---|
adult organism | 6.53e-19 | 114 |
major salivary gland | 1.10e-14 | 2 |
saliva-secreting gland | 9.46e-11 | 6 |
gland of oral region | 9.46e-11 | 6 |
gland of foregut | 9.46e-11 | 6 |
oral gland | 9.46e-11 | 6 |
oral cavity | 9.46e-11 | 6 |
vermiform appendix | 2.70e-08 | 1 |
caecum | 2.70e-08 | 1 |
midgut | 2.70e-08 | 1 |
submandibular gland | 3.10e-08 | 1 |
submandibular gland primordium | 3.10e-08 | 1 |
parotid gland | 3.80e-08 | 1 |
cheek | 3.80e-08 | 1 |
parotid gland primordium | 3.80e-08 | 1 |
seminal vesicle | 4.35e-08 | 1 |
seminal fluid secreting gland | 4.35e-08 | 1 |
subdivision of digestive tract | 4.53e-08 | 118 |
lower lobe of right lung | 6.97e-08 | 1 |
right lung lobe | 6.97e-08 | 1 |
lower lobe of lung | 6.97e-08 | 1 |
lobe of lung | 6.97e-08 | 1 |
right lung | 6.97e-08 | 1 |
lymph node | 7.45e-08 | 1 |
tonsil | 1.87e-07 | 1 |
mucosa-associated lymphoid tissue | 1.87e-07 | 1 |
lymphoid tissue | 1.87e-07 | 1 |
tonsillar ring | 1.87e-07 | 1 |
colon | 2.14e-07 | 9 |
oral opening | 3.16e-07 | 22 |
digestive system | 4.02e-07 | 145 |
digestive tract | 4.02e-07 | 145 |
primitive gut | 4.02e-07 | 145 |