FFCP PHASE1:Hg19::chr4:7436671..7436680,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=768239 | |EntrezGene=768239 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=33131 | |HGNC=33131 | ||
|TSSclassifier=strong | |||
|UniProt=Q6NUJ1 | |UniProt=Q6NUJ1 | ||
|association_with_transcript=19bp_to_ENST00000319098,NM_001085382,uc011bwj.1_5end | |association_with_transcript=19bp_to_ENST00000319098,NM_001085382,uc011bwj.1_5end | ||
|cluster_id=chr4:7436671..7436680,- | |||
|description=CAGE_peak_3_at_PSAPL1_5end | |description=CAGE_peak_3_at_PSAPL1_5end | ||
|id=chr4:7436671..7436680,- | |id=chr4:7436671..7436680,- | ||
|ontology_enrichment_celltype=CL:0002379!4.54e-09!1;CL:0002563!6.48e-09!4;CL:0002557!7.85e-09!1 | |ontology_enrichment_celltype=CL:0002379!4.54e-09!1;CL:0002563!6.48e-09!4;CL:0002557!7.85e-09!1 | ||
|ontology_enrichment_celltype_v019=CL:0002253;7.14e-26;2!CL:0000746;9.45e-18;3!CL:0002563;1.13e-13;4!CL:0000737;1.13e-13;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002253,7.14e-26,2;CL:0000746,1.12e-17,3;CL:0000513,1.12e-17,3;CL:0002563,1.13e-13,4;CL:0000737,1.29e-13,4 | |||
|ontology_enrichment_development_v019=UBERON:0009117;7.72e-21;10!UBERON:0005564;7.72e-21;10!CL:0000513;9.45e-18;3 | |||
|ontology_enrichment_disease=DOID:178!3.05e-09!1;DOID:326!3.05e-09!1;DOID:3978!3.05e-09!1;DOID:3394!3.05e-09!1;DOID:5844!3.05e-09!1;DOID:3620!4.54e-09!1;DOID:3565!4.54e-09!1 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001242!6.48e-09!4;UBERON:0001262!6.48e-09!4;UBERON:0004786!6.48e-09!4;UBERON:0004808!6.48e-09!4;UBERON:0001277!6.48e-09!4;UBERON:0002372!1.16e-08!1;UBERON:0001961!1.16e-08!1;UBERON:0001744!1.16e-08!1;UBERON:0001735!1.16e-08!1;UBERON:0000485!2.32e-08!9;UBERON:0003350!2.70e-07!5 | |ontology_enrichment_uberon=UBERON:0001242!6.48e-09!4;UBERON:0001262!6.48e-09!4;UBERON:0004786!6.48e-09!4;UBERON:0004808!6.48e-09!4;UBERON:0001277!6.48e-09!4;UBERON:0002372!1.16e-08!1;UBERON:0001961!1.16e-08!1;UBERON:0001744!1.16e-08!1;UBERON:0001735!1.16e-08!1;UBERON:0000485!2.32e-08!9;UBERON:0003350!2.70e-07!5 | ||
|ontology_enrichment_uberon_v019=UBERON:0000473;9.81e-26;8!UBERON:0003135;4.69e-19;11!UBERON:0001052;1.13e-13;4!UBERON:0001242;1.13e-13;4!UBERON:0001262;1.13e-13;4!UBERON:0004786;1.13e-13;4!UBERON:0004808;1.13e-13;4!UBERON:0001277;1.13e-13;4!UBERON:0004907;3.26e-11;5!UBERON:0000991;1.61e-10;21!UBERON:0003101;4.33e-10;22!UBERON:0000079;4.33e-10;22!UBERON:0000485;2.18e-08;7!UBERON:0003929;2.18e-08;7!UBERON:0003350;1.69e-07;8!UBERON:0001155;8.37e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,8.65e-26,8;UBERON:0003135,4.28e-19,11;UBERON:0001052,1.13e-13,4;UBERON:0001242,1.13e-13,4;UBERON:0001262,1.13e-13,4;UBERON:0004786,1.13e-13,4;UBERON:0004808,1.13e-13,4;UBERON:0001277,1.13e-13,4;UBERON:0004907,3.26e-11,5;UBERON:0000991,1.53e-10,21;UBERON:0009196,1.53e-10,21;UBERON:0009117,1.53e-10,21;UBERON:0005564,1.53e-10,21;UBERON:0004176,4.14e-10,22;UBERON:0003101,4.14e-10,22;UBERON:0000079,4.14e-10,22;UBERON:0003350,1.69e-07,8;UBERON:0001155,8.37e-07,9;UBERON:0000485,8.37e-07,9 | |||
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|short_description=p3@PSAPL1 | |short_description=p3@PSAPL1 | ||
}} | }} |
Latest revision as of 13:36, 18 September 2015
Short description: | p3@PSAPL1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_PSAPL1_5end |
Coexpression cluster: | NA |
Association with transcript: | 19bp_to_ENST00000319098, NM_001085382, uc011bwj.1_5end |
EntrezGene: | PSAPL1 |
HGNC: | 33131 |
UniProt: | Q6NUJ1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of large intestine | 7.14e-26 | 2 |
cardiac muscle cell | 1.12e-17 | 3 |
cardiac muscle myoblast | 1.12e-17 | 3 |
intestinal epithelial cell | 1.13e-13 | 4 |
striated muscle cell | 1.29e-13 | 4 |
Ontology term | p-value | n |
---|---|---|
testis | 8.65e-26 | 8 |
male reproductive organ | 4.28e-19 | 11 |
rectum | 1.13e-13 | 4 |
intestinal mucosa | 1.13e-13 | 4 |
wall of intestine | 1.13e-13 | 4 |
gastrointestinal system mucosa | 1.13e-13 | 4 |
gastrointestinal system epithelium | 1.13e-13 | 4 |
intestinal epithelium | 1.13e-13 | 4 |
lower digestive tract | 3.26e-11 | 5 |
gonad | 1.53e-10 | 21 |
indifferent external genitalia | 1.53e-10 | 21 |
indifferent gonad | 1.53e-10 | 21 |
gonad primordium | 1.53e-10 | 21 |
external genitalia | 4.14e-10 | 22 |
male organism | 4.14e-10 | 22 |
male reproductive system | 4.14e-10 | 22 |
epithelium of mucosa | 1.69e-07 | 8 |
colon | 8.37e-07 | 9 |
simple columnar epithelium | 8.37e-07 | 9 |