FFCP PHASE1:Hg19::chr5:145718398..145718410,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5459 | |EntrezGene=5459 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9220 | |HGNC=9220 | ||
|TSSclassifier=strong | |||
|UniProt=Q15319 | |UniProt=Q15319 | ||
|association_with_transcript=-176bp_to_ENST00000230732,NM_002700,uc003loa.2_5end | |association_with_transcript=-176bp_to_ENST00000230732,NM_002700,uc003loa.2_5end | ||
|cluster_id=chr5:145718398..145718410,+ | |||
|coexpression_cluster_id=C150 | |||
|description=CAGE_peak_1_at_POU4F3_5end | |description=CAGE_peak_1_at_POU4F3_5end | ||
|id=chr5:145718398..145718410,+ | |id=chr5:145718398..145718410,+ | ||
|ontology_enrichment_celltype=CL:0000242!8.70e-23!2;CL:0000946!1.47e-11!1;CL:0000786!1.47e-11!1;CL:0000980!1.47e-11!1;CL:0000312!1.10e-09!5;CL:0000240!3.27e-08!6;CL:0000311!3.27e-08!6;CL:0000079!3.27e-08!6;CL:0000237!3.27e-08!6;CL:0000036!3.27e-08!6;CL:0000357!3.27e-08!6;CL:0000114!3.27e-08!6;CL:0000039!4.46e-07!7;CL:0000586!4.46e-07!7 | |ontology_enrichment_celltype=CL:0000242!8.70e-23!2;CL:0000946!1.47e-11!1;CL:0000786!1.47e-11!1;CL:0000980!1.47e-11!1;CL:0000312!1.10e-09!5;CL:0000240!3.27e-08!6;CL:0000311!3.27e-08!6;CL:0000079!3.27e-08!6;CL:0000237!3.27e-08!6;CL:0000036!3.27e-08!6;CL:0000357!3.27e-08!6;CL:0000114!3.27e-08!6;CL:0000039!4.46e-07!7;CL:0000586!4.46e-07!7 | ||
|ontology_enrichment_celltype_v019=CL:0000123;1.05e-79;2!CL:0000242;1.05e-79;2!CL:0000312;1.05e-32;5!CL:0000240;1.82e-27;6!CL:0000311;1.82e-27;6!CL:0000079;1.82e-27;6!CL:0000237;1.82e-27;6!CL:0000039;2.02e-23;7!CL:0000586;2.02e-23;7!CL:0000362;1.03e-18;9!CL:0002159;2.00e-12;14!CL:0000095;1.99e-09;17!CL:0002319;6.43e-07;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000242,1.05e-79,2;CL:0000312,1.05e-32,5;CL:0000240,1.82e-27,6;CL:0000311,1.82e-27,6;CL:0000079,1.82e-27,6;CL:0000237,1.82e-27,6;CL:0000036,1.82e-27,6;CL:0000357,1.82e-27,6;CL:0000114,1.82e-27,6;CL:0000039,2.02e-23,7;CL:0000586,2.02e-23,7;CL:0000362,1.03e-18,9;CL:0002159,2.00e-12,14;CL:0000095,1.99e-09,17;CL:0000123,1.99e-09,17;CL:0002319,6.43e-07,25 | |||
|ontology_enrichment_development_v019=CL:0000357;1.82e-27;6!CL:0000114;1.82e-27;6!UBERON:0009117;9.54e-17;10!UBERON:0005564;9.54e-17;10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3095;3.51e-08;22!DOID:2994;3.51e-08;22 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,3.51e-08,22;DOID:2994,3.51e-08,22;DOID:0050687,1.55e-07,143 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0000473;1.21e-20;8!UBERON:0003135;2.51e-15;11!UBERON:0001003;1.15e-11;15!UBERON:0007376;1.15e-11;15!UBERON:0000991;1.59e-08;21!UBERON:0003101;3.51e-08;22!UBERON:0000079;3.51e-08;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,1.21e-20,8;UBERON:0003135,2.51e-15,11;UBERON:0001003,1.15e-11,15;UBERON:0007376,1.15e-11,15;UBERON:0007383,1.15e-11,15;UBERON:0000991,1.59e-08,21;UBERON:0009196,1.59e-08,21;UBERON:0009117,1.59e-08,21;UBERON:0005564,1.59e-08,21;UBERON:0004176,3.51e-08,22;UBERON:0003101,3.51e-08,22;UBERON:0000079,3.51e-08,22 | |||
|phase1_expression=0,0,0,0,0,0,0,0.631719873426831,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130059347559878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0.241011029883482,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,67.9144445285685,0,0,0,0,0,0,0.295547618953547,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.60129367765797,0.103688191397247,0,0,0,0,0,0.138674673013139,0,0,0,0,0,0,0,0,0,0,0.225980740780532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,314.721056702224,139.558950552225,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115233987555779,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150962843566674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.75684698604535,3.50990555009325,0,0,0,0,0,0,0,0.124149428591716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0.631719873426831,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130059347559878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0.241011029883482,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,67.9144445285685,0,0,0,0,0,0,0.295547618953547,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.60129367765797,0.103688191397247,0,0,0,0,0,0.138674673013139,0,0,0,0,0,0,0,0,0,0,0.225980740780532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,314.721056702224,139.558950552225,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115233987555779,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150962843566674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.75684698604535,3.50990555009325,0,0,0,0,0,0,0,0.124149428591716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p1@POU4F3 | |short_description=p1@POU4F3 | ||
}} | }} |
Latest revision as of 20:29, 15 September 2015
Short description: | p1@POU4F3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_POU4F3_5end |
Coexpression cluster: | C150_merkel_carcinoid_nonsmall_gastrointestinal_argyrophil_pineal_small |
Association with transcript: | -176bp_to_ENST00000230732, NM_002700, uc003loa.2_5end |
EntrezGene: | POU4F3 |
HGNC: | 9220 |
UniProt: | Q15319 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Merkel cell | 1.05e-79 | 2 |
keratinocyte | 1.05e-32 | 5 |
stratified squamous epithelial cell | 1.82e-27 | 6 |
keratin accumulating cell | 1.82e-27 | 6 |
stratified epithelial cell | 1.82e-27 | 6 |
keratinizing barrier epithelial cell | 1.82e-27 | 6 |
epithelial fate stem cell | 1.82e-27 | 6 |
stratified epithelial stem cell | 1.82e-27 | 6 |
surface ectodermal cell | 1.82e-27 | 6 |
germ line cell | 2.02e-23 | 7 |
germ cell | 2.02e-23 | 7 |
epidermal cell | 1.03e-18 | 9 |
general ecto-epithelial cell | 2.00e-12 | 14 |
neuron associated cell | 1.99e-09 | 17 |
neuron associated cell (sensu Vertebrata) | 1.99e-09 | 17 |
neural cell | 6.43e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
testis | 1.21e-20 | 8 |
male reproductive organ | 2.51e-15 | 11 |
skin epidermis | 1.15e-11 | 15 |
outer epithelium | 1.15e-11 | 15 |
enveloping layer of ectoderm | 1.15e-11 | 15 |
gonad | 1.59e-08 | 21 |
indifferent external genitalia | 1.59e-08 | 21 |
indifferent gonad | 1.59e-08 | 21 |
gonad primordium | 1.59e-08 | 21 |
external genitalia | 3.51e-08 | 22 |
male organism | 3.51e-08 | 22 |
male reproductive system | 3.51e-08 | 22 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 3.51e-08 | 22 |
germ cell cancer | 3.51e-08 | 22 |
cell type cancer | 1.55e-07 | 143 |