FFCP PHASE1:Hg19::chr6:13013854..13013868,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(9 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr6:13013854..13013868,+ | |||
|coexpression_cluster_id=C2271 | |||
|description=CAGE_peak_at_chr6:13013854..13013868,+ | |description=CAGE_peak_at_chr6:13013854..13013868,+ | ||
|id=chr6:13013854..13013868,+ | |id=chr6:13013854..13013868,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0004140;1.64e-10;1!UBERON:0006601;1.76e-08;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003080!4.42e-46!42;UBERON:0001049!1.19e-44!57;UBERON:0005068!1.19e-44!57;UBERON:0006241!1.19e-44!57;UBERON:0007135!1.19e-44!57;UBERON:0002780!5.36e-44!41;UBERON:0001890!5.36e-44!41;UBERON:0006240!5.36e-44!41;UBERON:0001893!2.31e-43!34;UBERON:0002791!4.69e-41!33;UBERON:0002616!3.69e-40!59;UBERON:0002020!1.04e-39!34;UBERON:0003528!1.04e-39!34;UBERON:0001869!1.25e-39!32;UBERON:0007023!1.16e-37!115;UBERON:0002619!1.42e-37!22;UBERON:0001950!2.60e-37!20;UBERON:0000955!3.88e-37!69;UBERON:0006238!3.88e-37!69;UBERON:0001017!1.20e-35!82;UBERON:0005743!2.03e-35!86;UBERON:0000956!1.41e-32!25;UBERON:0000203!1.41e-32!25;UBERON:0003056!2.73e-31!61;UBERON:0000073!4.57e-31!94;UBERON:0001016!4.57e-31!94;UBERON:0003075!4.48e-30!86;UBERON:0007284!4.48e-30!86;UBERON:0002346!2.76e-28!90;UBERON:0000153!4.82e-20!129;UBERON:0007811!4.82e-20!129;UBERON:0000033!4.43e-19!123;UBERON:0001871!1.22e-15!7;UBERON:0004121!8.94e-14!169;UBERON:0002021!1.22e-13!5;UBERON:0000924!3.21e-13!173;UBERON:0006601!3.21e-13!173;UBERON:0000025!1.59e-12!194;UBERON:0002420!3.88e-12!9;UBERON:0007245!3.88e-12!9;UBERON:0010009!3.88e-12!9;UBERON:0010011!3.88e-12!9;UBERON:0000454!3.88e-12!9;UBERON:0000477!1.92e-11!286;UBERON:0004111!2.29e-11!241;UBERON:0000200!3.95e-11!6;UBERON:0001872!6.07e-09!5;UBERON:0002308!1.02e-08!9;UBERON:0000125!1.02e-08!9;UBERON:0002771!1.20e-08!3;UBERON:0000349!2.24e-08!5;UBERON:0009663!4.59e-08!7;UBERON:0000483!7.15e-08!309;UBERON:0000064!1.08e-07!219;UBERON:0000119!1.10e-07!312;UBERON:0002298!2.49e-07!8;UBERON:0000473!3.64e-07!8 | |ontology_enrichment_uberon=UBERON:0003080!4.42e-46!42;UBERON:0001049!1.19e-44!57;UBERON:0005068!1.19e-44!57;UBERON:0006241!1.19e-44!57;UBERON:0007135!1.19e-44!57;UBERON:0002780!5.36e-44!41;UBERON:0001890!5.36e-44!41;UBERON:0006240!5.36e-44!41;UBERON:0001893!2.31e-43!34;UBERON:0002791!4.69e-41!33;UBERON:0002616!3.69e-40!59;UBERON:0002020!1.04e-39!34;UBERON:0003528!1.04e-39!34;UBERON:0001869!1.25e-39!32;UBERON:0007023!1.16e-37!115;UBERON:0002619!1.42e-37!22;UBERON:0001950!2.60e-37!20;UBERON:0000955!3.88e-37!69;UBERON:0006238!3.88e-37!69;UBERON:0001017!1.20e-35!82;UBERON:0005743!2.03e-35!86;UBERON:0000956!1.41e-32!25;UBERON:0000203!1.41e-32!25;UBERON:0003056!2.73e-31!61;UBERON:0000073!4.57e-31!94;UBERON:0001016!4.57e-31!94;UBERON:0003075!4.48e-30!86;UBERON:0007284!4.48e-30!86;UBERON:0002346!2.76e-28!90;UBERON:0000153!4.82e-20!129;UBERON:0007811!4.82e-20!129;UBERON:0000033!4.43e-19!123;UBERON:0001871!1.22e-15!7;UBERON:0004121!8.94e-14!169;UBERON:0002021!1.22e-13!5;UBERON:0000924!3.21e-13!173;UBERON:0006601!3.21e-13!173;UBERON:0000025!1.59e-12!194;UBERON:0002420!3.88e-12!9;UBERON:0007245!3.88e-12!9;UBERON:0010009!3.88e-12!9;UBERON:0010011!3.88e-12!9;UBERON:0000454!3.88e-12!9;UBERON:0000477!1.92e-11!286;UBERON:0004111!2.29e-11!241;UBERON:0000200!3.95e-11!6;UBERON:0001872!6.07e-09!5;UBERON:0002308!1.02e-08!9;UBERON:0000125!1.02e-08!9;UBERON:0002771!1.20e-08!3;UBERON:0000349!2.24e-08!5;UBERON:0009663!4.59e-08!7;UBERON:0000483!7.15e-08!309;UBERON:0000064!1.08e-07!219;UBERON:0000119!1.10e-07!312;UBERON:0002298!2.49e-07!8;UBERON:0000473!3.64e-07!8 | ||
|ontology_enrichment_uberon_v019=UBERON:0001950;9.81e-40;20!UBERON:0002619;3.70e-36;22!UBERON:0000956;8.01e-32;25!UBERON:0000203;8.01e-32;25!UBERON:0001893;1.64e-26;34!UBERON:0001869;4.89e-26;32!UBERON:0002791;8.35e-23;32!UBERON:0003528;1.31e-19;34!UBERON:0002020;1.31e-19;34!UBERON:0002780;5.86e-19;41!UBERON:0001890;5.86e-19;41!UBERON:0002021;1.20e-16;5!UBERON:0001870;1.78e-12;3!UBERON:0000073;1.10e-10;53!UBERON:0002616;1.10e-10;53!UBERON:0002902;2.16e-10;1!UBERON:0002146;2.16e-10;1!UBERON:0005623;2.16e-10;1!UBERON:0009899;2.16e-10;1!UBERON:0002022;5.53e-10;1!UBERON:0007190;5.53e-10;1!UBERON:0000955;1.25e-08;68!UBERON:0001872;7.76e-08;5!UBERON:0001017;7.97e-08;75 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001950,1.56e-39,20;UBERON:0002619,5.64e-36,22;UBERON:0000956,1.16e-31,25;UBERON:0000203,1.16e-31,25;UBERON:0001869,6.63e-30,32;UBERON:0001893,4.23e-28,34;UBERON:0002780,1.59e-27,41;UBERON:0001890,1.59e-27,41;UBERON:0003080,1.59e-27,41;UBERON:0006240,1.59e-27,41;UBERON:0002791,1.22e-24,32;UBERON:0003528,3.78e-23,34;UBERON:0002020,3.78e-23,34;UBERON:0000073,5.55e-21,53;UBERON:0002616,5.55e-21,53;UBERON:0001049,8.92e-20,56;UBERON:0005068,8.92e-20,56;UBERON:0006241,8.92e-20,56;UBERON:0007135,8.92e-20,56;UBERON:0000955,1.17e-18,68;UBERON:0006238,1.17e-18,68;UBERON:0003056,5.04e-18,61;UBERON:0002021,1.79e-16,5;UBERON:0003075,2.08e-15,82;UBERON:0007284,2.08e-15,82;UBERON:0001017,2.14e-15,81;UBERON:0002346,1.34e-14,86;UBERON:0001016,1.12e-13,89;UBERON:0001870,2.67e-12,3;UBERON:0010371,1.01e-11,104;UBERON:0007023,1.26e-10,114;UBERON:0010314,2.13e-10,132;UBERON:0002146,2.16e-10,1;UBERON:0005623,2.16e-10,1;UBERON:0002902,2.37e-10,1;UBERON:0009899,2.37e-10,1;UBERON:0007190,4.06e-10,1;UBERON:0002022,5.79e-10,1;UBERON:0001872,7.01e-08,5;UBERON:0000025,1.54e-07,192;UBERON:0004121,2.29e-07,171;UBERON:0000924,2.29e-07,171;UBERON:0006601,2.29e-07,171 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258416759169329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.462985512576611,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.17217447210047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1490322207942,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.994147647766298,0.562677665642051,0,0,0,0,0,0,0,0,0,0,0,0,0.197286811273867,0,0,0,0.74214478529481,1.99613798001194,0,0,0.724999575434793,0,0,0,0,0,0,0,0.241192877250816,0,0.442317039724898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.865554558968364,0,0.0884575645033392,0,0,0,0,0.202203398942031,0,0.234264445725339,0,0,0,0,0,1.53036380815245,0,0,0.207376382794494,0,0,0,0,0,0,0.173559738335131,0,0,0,0,0,0,0,0,0.176512253383001,0,0,0,1.07628353124994,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0,2.06244381610515,0,0.798716001995964,1.28767814440971,1.78537165953498,6.78553072115935,0,0,0,0,0,0,0,0,0.681017030557878,0.321506296930038,0.137539436597234,0,0,0,1.45798935979259,0,0,0.734364233889974,0,0,0,0,0.662091970365432,0,0,0,0,0,0,0,0,0,0,0.258565912723101,0,0,0,0,0.157204305099666,0,0,0,0,0,0.544017803369474,0,0,0,0,0,0.610131324509816,1.502291168478,0,0,0.434674820589684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.967809053062115,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.57723490002507,0,0,0,0.321146125482298,4.25089728976755,1.11743701340006,0.82046545696302,0.504143392443436,2.00556032146232,0.645902582527404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.55336444622308,0.781078098613847,1.65349437200947,1.33173201407204,0,0,0,0,0,0,1.00885116665647,0,0,0,0,0,0.339848664884159,0.920818829879887,0,0,0.078493092850514,0.314231179832004,0,0,0,0,0.142953088353313,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205325613712494,0,0,0,2.18845852677505,0,0.11294608203896,0.109940516745429,1.50962843566674,0,0,0,0,0,0,0,0.4226557275834,0,0,0.0644578879735772,0,0,0,0,0,0,0.143339583151451,0,1.35982980381829,1.74540276136151,0,0,0,0,0,0,0,0.305966489225945,0.26721740526556,0.36757959813938,0.50141507858475,0.0757786982182394,0,0,0.310298987585686,0,0,0.0645889098360061,0.186224142887574,0.112131862580613,0,0.202117188958219,0,0,0,0,0,0,0,0,0,0,0,0.406896178315738,0.665756774185513,0.201273793591026,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258416759169329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.462985512576611,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.17217447210047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1490322207942,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.994147647766298,0.562677665642051,0,0,0,0,0,0,0,0,0,0,0,0,0.197286811273867,0,0,0,0.74214478529481,1.99613798001194,0,0,0.724999575434793,0,0,0,0,0,0,0,0.241192877250816,0,0.442317039724898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.865554558968364,0,0.0884575645033392,0,0,0,0,0.202203398942031,0,0.234264445725339,0,0,0,0,0,1.53036380815245,0,0,0.207376382794494,0,0,0,0,0,0,0.173559738335131,0,0,0,0,0,0,0,0,0.176512253383001,0,0,0,1.07628353124994,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0,2.06244381610515,0,0.798716001995964,1.28767814440971,1.78537165953498,6.78553072115935,0,0,0,0,0,0,0,0,0.681017030557878,0.321506296930038,0.137539436597234,0,0,0,1.45798935979259,0,0,0.734364233889974,0,0,0,0,0.662091970365432,0,0,0,0,0,0,0,0,0,0,0.258565912723101,0,0,0,0,0.157204305099666,0,0,0,0,0,0.544017803369474,0,0,0,0,0,0.610131324509816,1.502291168478,0,0,0.434674820589684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.967809053062115,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.57723490002507,0,0,0,0.321146125482298,4.25089728976755,1.11743701340006,0.82046545696302,0.504143392443436,2.00556032146232,0.645902582527404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.55336444622308,0.781078098613847,1.65349437200947,1.33173201407204,0,0,0,0,0,0,1.00885116665647,0,0,0,0,0,0.339848664884159,0.920818829879887,0,0,0.078493092850514,0.314231179832004,0,0,0,0,0.142953088353313,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205325613712494,0,0,0,2.18845852677505,0,0.11294608203896,0.109940516745429,1.50962843566674,0,0,0,0,0,0,0,0.4226557275834,0,0,0.0644578879735772,0,0,0,0,0,0,0.143339583151451,0,1.35982980381829,1.74540276136151,0,0,0,0,0,0,0,0.305966489225945,0.26721740526556,0.36757959813938,0.50141507858475,0.0757786982182394,0,0,0.310298987585686,0,0,0.0645889098360061,0.186224142887574,0.112131862580613,0,0.202117188958219,0,0,0,0,0,0,0,0,0,0,0,0.406896178315738,0.665756774185513,0.201273793591026,0 | ||
|short_description=p@chr6:13013854..13013868,+ | |short_description=p@chr6:13013854..13013868,+ | ||
}} | }} |
Latest revision as of 19:21, 30 July 2015
Short description: | p@chr6:13013854..13013868, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr6:13013854..13013868, + |
Coexpression cluster: | C2271_heart_occipital_left_parietal_temporal_medial_caudate |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data