FFCP PHASE1:Hg19::chr6:83073021..83073072,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7162 | |EntrezGene=7162 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12004 | |HGNC=12004 | ||
|TSSclassifier=strong | |||
|UniProt=A8K555,Q13641 | |UniProt=A8K555,Q13641 | ||
|association_with_transcript=98bp_to_ENST00000535040,NM_006670,uc003pjn.3_5end | |association_with_transcript=98bp_to_ENST00000535040,NM_006670,uc003pjn.3_5end | ||
|cluster_id=chr6:83073021..83073072,+ | |||
|coexpression_cluster_id=C4630 | |||
|description=CAGE_peak_4_at_TPBG_5end | |description=CAGE_peak_4_at_TPBG_5end | ||
|id=chr6:83073021..83073072,+ | |id=chr6:83073021..83073072,+ | ||
|ontology_enrichment_celltype=CL:0000055!3.88e-34!180;CL:0000057!2.77e-22!75;CL:0000680!5.39e-17!57;CL:0000056!5.39e-17!57;CL:0000355!5.39e-17!57;CL:0000187!3.58e-16!54;CL:0002620!2.04e-15!23;CL:0000183!3.03e-14!59;CL:0000393!1.26e-13!60;CL:0000211!1.26e-13!60;CL:0000192!1.10e-12!42;CL:0000514!1.10e-12!42;CL:0000359!5.12e-08!32;CL:0000188!1.98e-07!9;CL:0002334!4.10e-07!12 | |ontology_enrichment_celltype=CL:0000055!3.88e-34!180;CL:0000057!2.77e-22!75;CL:0000680!5.39e-17!57;CL:0000056!5.39e-17!57;CL:0000355!5.39e-17!57;CL:0000187!3.58e-16!54;CL:0002620!2.04e-15!23;CL:0000183!3.03e-14!59;CL:0000393!1.26e-13!60;CL:0000211!1.26e-13!60;CL:0000192!1.10e-12!42;CL:0000514!1.10e-12!42;CL:0000359!5.12e-08!32;CL:0000188!1.98e-07!9;CL:0002334!4.10e-07!12 | ||
|ontology_enrichment_celltype_v019=CL:0002620;6.20e-25;23!CL:0000723;4.39e-13;61!CL:0000134;1.05e-11;55!CL:0000034;2.65e-11;69!CL:0000187;4.30e-11;55!CL:0000048;7.18e-11;58!CL:0000057;7.86e-11;73!CL:0002551;2.71e-10;6!CL:0000188;8.79e-10;9!CL:0000192;1.83e-09;43!CL:0002570;2.77e-09;8!CL:0002539;4.48e-09;10!CL:0000393;6.08e-09;61!CL:0000211;6.08e-09;61!CL:0000359;3.33e-08;32!CL:0000569;5.18e-07;4!CL:0002320;7.32e-07;188 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,4.66e-25,76;CL:0002620,6.23e-25,23;CL:0000034,3.88e-19,441;CL:0000723,4.15e-18,433;CL:0000048,1.77e-17,427;CL:0000187,2.22e-17,55;CL:0000680,5.28e-16,58;CL:0000056,5.28e-16,58;CL:0000355,5.28e-16,58;CL:0000393,9.05e-15,61;CL:0000211,9.05e-15,61;CL:0000192,4.28e-12,43;CL:0000514,4.28e-12,43;CL:0002551,2.63e-10,6;CL:0000188,9.13e-10,9;CL:0002570,2.39e-09,8;CL:0002539,4.78e-09,10;CL:0000359,2.24e-08,32;CL:0000134,2.94e-07,354;CL:0000569,3.92e-07,4;CL:0000011,3.92e-07,4;CL:0000219,7.34e-07,386;CL:0002320,9.04e-07,361 | |||
|ontology_enrichment_development_v019=CL:0000355;1.82e-09;58!CL:0000514;1.83e-09;43!CL:0000011;5.18e-07;4 | |||
|ontology_enrichment_disease=DOID:2394!2.90e-11!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;3.98e-19;14!DOID:17;1.82e-08;5!DOID:450;1.82e-08;5!DOID:66;1.82e-08;5!DOID:423;1.82e-08;5!DOID:0080000;1.82e-08;5!DOID:11722;1.82e-08;5!DOID:120;4.76e-08;27!DOID:193;2.99e-07;29 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,3.64e-19,14;DOID:17,2.12e-08,5;DOID:450,2.12e-08,5;DOID:66,2.12e-08,5;DOID:423,2.12e-08,5;DOID:0080000,2.12e-08,5;DOID:11722,2.12e-08,5;DOID:120,4.57e-08,27;DOID:193,2.88e-07,29 | |||
|ontology_enrichment_uberon=UBERON:0000914!1.82e-22!83;UBERON:0002329!1.82e-22!83;UBERON:0003077!1.82e-22!83;UBERON:0003059!1.82e-22!83;UBERON:0007282!1.82e-22!83;UBERON:0009618!1.82e-22!83;UBERON:0007285!1.82e-22!83;UBERON:0004290!2.19e-21!70;UBERON:0000486!4.11e-20!82;UBERON:0003102!2.21e-17!95;UBERON:0002199!1.35e-16!45;UBERON:0002416!1.35e-16!45;UBERON:0001134!2.04e-15!61;UBERON:0002036!2.04e-15!61;UBERON:0003082!2.04e-15!61;UBERON:0002385!5.33e-15!63;UBERON:0001015!5.33e-15!63;UBERON:0000383!5.33e-15!63;UBERON:0002097!1.00e-14!40;UBERON:0000475!1.17e-12!365;UBERON:0005256!1.15e-09!143;UBERON:0002067!1.68e-08!9;UBERON:0004016!1.68e-08!9;UBERON:0010083!1.68e-08!9;UBERON:0004573!6.21e-08!33;UBERON:0004571!6.21e-08!33;UBERON:0001637!1.33e-07!42;UBERON:0003509!1.33e-07!42;UBERON:0004572!1.33e-07!42 | |ontology_enrichment_uberon=UBERON:0000914!1.82e-22!83;UBERON:0002329!1.82e-22!83;UBERON:0003077!1.82e-22!83;UBERON:0003059!1.82e-22!83;UBERON:0007282!1.82e-22!83;UBERON:0009618!1.82e-22!83;UBERON:0007285!1.82e-22!83;UBERON:0004290!2.19e-21!70;UBERON:0000486!4.11e-20!82;UBERON:0003102!2.21e-17!95;UBERON:0002199!1.35e-16!45;UBERON:0002416!1.35e-16!45;UBERON:0001134!2.04e-15!61;UBERON:0002036!2.04e-15!61;UBERON:0003082!2.04e-15!61;UBERON:0002385!5.33e-15!63;UBERON:0001015!5.33e-15!63;UBERON:0000383!5.33e-15!63;UBERON:0002097!1.00e-14!40;UBERON:0000475!1.17e-12!365;UBERON:0005256!1.15e-09!143;UBERON:0002067!1.68e-08!9;UBERON:0004016!1.68e-08!9;UBERON:0010083!1.68e-08!9;UBERON:0004573!6.21e-08!33;UBERON:0004571!6.21e-08!33;UBERON:0001637!1.33e-07!42;UBERON:0003509!1.33e-07!42;UBERON:0004572!1.33e-07!42 | ||
|ontology_enrichment_uberon_v019=UBERON:0002097;7.16e-16;41!UBERON:0002199;2.09e-15;46!UBERON:0002416;2.09e-15;46!UBERON:0002067;8.14e-14;9!UBERON:0003102;1.02e-13;50!UBERON:0002385;6.94e-11;31!UBERON:0001015;6.94e-11;31!UBERON:0000383;6.94e-11;31!UBERON:0000992;8.49e-10;13!UBERON:0000947;1.89e-09;21!UBERON:0010191;1.89e-09;21!UBERON:0002118;1.94e-09;5!UBERON:0004237;4.48e-09;10!UBERON:0004695;4.48e-09;10!UBERON:0002111;4.48e-09;10!UBERON:0004178;4.48e-09;10!UBERON:0004573;1.64e-08;33!UBERON:0004571;1.64e-08;33!UBERON:0001135;3.07e-08;15!UBERON:0001013;6.56e-08;14!UBERON:0002119;1.84e-07;4!UBERON:0002384;5.00e-07;198 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002199,7.71e-24,46;UBERON:0002416,7.71e-24,46;UBERON:0007524,2.04e-23,73;UBERON:0002329,4.93e-23,71;UBERON:0003059,4.93e-23,71;UBERON:0007282,4.93e-23,71;UBERON:0004290,4.93e-23,71;UBERON:0009618,4.93e-23,71;UBERON:0003077,1.54e-22,72;UBERON:0007285,1.54e-22,72;UBERON:0002097,2.17e-21,41;UBERON:0007503,7.41e-20,78;UBERON:0000486,6.22e-18,83;UBERON:0003102,6.45e-17,99;UBERON:0001134,2.19e-14,62;UBERON:0002036,2.19e-14,62;UBERON:0003082,2.19e-14,62;UBERON:0002067,8.88e-14,9;UBERON:0004016,8.88e-14,9;UBERON:0010083,8.88e-14,9;UBERON:0002385,1.17e-13,64;UBERON:0001015,1.17e-13,64;UBERON:0000383,1.17e-13,64;UBERON:0005256,1.05e-11,122;UBERON:0000992,8.37e-10,13;UBERON:0000947,1.84e-09,21;UBERON:0010191,1.84e-09,21;UBERON:0002118,1.85e-09,5;UBERON:0001637,2.43e-09,42;UBERON:0003509,2.43e-09,42;UBERON:0004572,2.43e-09,42;UBERON:0004573,3.03e-09,33;UBERON:0004571,3.03e-09,33;UBERON:0004237,4.78e-09,10;UBERON:0004695,4.78e-09,10;UBERON:0002111,4.78e-09,10;UBERON:0004178,4.78e-09,10;UBERON:0000490,9.10e-09,148;UBERON:0001135,3.40e-08,15;UBERON:0001013,5.50e-08,14;UBERON:0002119,1.88e-07,4;UBERON:0003104,7.91e-07,160;UBERON:0009142,7.91e-07,160 | |||
|phase1_expression=0.181678379270557,0.856402095563933,0,0,0,0,0,21.4784756965123,0.261185628199839,0.491467873003018,0,0,0,0,0,3.36162573225888,1.20538905604795,0,1.95173119516203,0.123121058076788,0,0.313454721478088,0.286235987131057,0.136874425072884,0,0,0,0,0,0,0,0,0.90361775633475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.722878304769133,0.50133791063589,0.144846518960824,0,0,0,0,0.087834785693126,0.0654895377488563,0.728590576585084,0,0,0,0,0,0,0,0,2.58070378531837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.49091585508596,1.2663051166458,4.10468460520978,8.60509862246441,1.77334191099179,0.560677600142307,0,0,0.311211035399766,0,0.490385709340376,0,0,2.10889288650417,17.1688042256676,6.27519003698894,5.52960118041664,13.504967344033,4.04682360920329,4.6348766211742,1.83738754129404,2.08818339430006,0.309977343527296,1.18800285728205,0.989067717114227,0,0,2.18836948140286,3.00284447692714,1.93944880838928,2.19488810440419,0.612975591598039,0.901428353439581,0.453728732640084,3.04962380671065,2.34913127700424,6.14602513362729,18.6056479572329,8.34725486831355,3.34932702059318,1.48893485065272,1.85653965465393,1.16924406193438,3.5340728394176,4.23429533754577,2.42469085228218,1.42003837006646,0.201504196455281,2.54340888465731,0.193260853163297,0,0.286804595389004,1.34171076742555,0,0.464775771478074,2.90250954043037,1.26160425437814,0.36497735907583,7.8224766164908,3.21620469096443,1.38134921352481,1.39310378409594,0.721879481669586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.857839051492628,0.878002283269004,1.1240175325762,3.9206299240536,0.185176890317059,0,2.07986957055916,0,0,0,0,0,0,0,0.858486162094873,0,0,0,0,0,0.283550194484773,0.358234090811393,1.74380363108377,0.383382679165211,0,0,0,0,0,0.952468414382536,0,0,0,0.308482478109971,0,0,0.448524337381443,0,0.2933531432838,0.517086863031111,0,8.45302752556,1.06375246633948,0,1.02882949704857,0,1.3321108950805,0,0,0,6.84045987016844,0,0,0,0,0.299918973546171,0,0,0,0,0,1.42636905040718,0.579125226670317,0.410952645100767,0.179060963239896,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0.12269149171914,0,0.271265023699736,0.623912584592421,0.535286966391485,0.473107245101804,3.74852527976682,0,0,0,0.664225598535437,0.184369168541703,3.47534457872331,0,0.343143423810856,0,0,0,0,0,0,0.496215615637554,0.306923946576125,0.280660094433074,0.896974044789907,0,1.93024705372329,2.96836132889982,16.6546469306868,11.3639504200401,13.3867264302509,18.1739050214267,8.94819914141686,0,0.200506470303285,0,2.06666006696292,4.55227920016793,0.524497659837696,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0.082509499920588,1.72279661398852,0.650060246036521,9.64103579064957,2.99679226705578,5.39170159901255,6.14014698904518,11.164762371247,1.28904293841928,1.30515024522806,9.289702388355,0.890320356467374,0.165284915360978,0.192190067365106,0.382838137483752,0.2023155617111,5.11330104227014,76.1845879330149,8.3644472419272,2.15623506123262,0,13.0489948811261,0.74129687641568,0,0,0,0,1.02359116524534,0.855877976067841,31.8203247925937,0,1.61885211824983,0.54907405947211,1.17812402345686,0.404364963146632,1.58510321173008,0.421258456238981,0.48763373908959,0.487426979262569,4.22600587027022,4.09499734223957,0.565621727814851,7.910568163417,3.85955740482287,0.66343897524122,0.438450885253763,3.47265320560013,1.31178950409327,0,1.239293992399,3.66204283291914,1.43411352204052,0.196498082026242,0,5.32141596105897,0.211107635297664,0.329294892959902,1.89736586882858,1.39973888097993,0.48111056362756,0.670302275535787,0,0,0.43050537267123,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00177834520615,0,0,0,0,0,0,0,0.311039587661807,0,0,0,0.591860433821602,0,0,0,0.185536196323703,1.99613798001194,0,0,0,0,0,0,0,0,0,0,0.241192877250816,0,0,0,0,0,0.278847488557207,0.923403102045565,0.227884111694002,0,0.0897576444097721,0,0,2.65633020865401,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234264445725339,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0979923974143777,0,0.17472666824203,0,0,0,0,3.87956065953678,0,0.225980740780532,0,0,0.253243183823515,0,0,0,0,0,0,0.171594997861965,0,0,0,0.271808412147228,0,0,0.577901179803038,1.20084057741958,0,0,0.429765441419957,0,0,0,0,0,0,0,0.0671834724867263,4.68389848605125,0,0,0,0,0,0,0,0,0,0,0,0,0,0.182248669974074,0,0.0788057072991982,0.0524545881349981,0.211200673038813,0,0.383830394638891,0,0,0,0.542999601753713,3.45688596480507,3.26587360109409,0,0,0.340776043570843,0.113312091520126,0,0,0.129282956361551,0,0,0,0,0,0,0,0,0,0.638341257770182,0,0,0,0,0,0.886068179966986,0,0.250381861413,0.573409195690071,0,0.124192805882767,0,0.249960815924213,0,0,0,0,0,17.1643023319905,5.84283274618061,12.7605348145601,1.7046270474758,2.0125432140206,0.889811221596536,2.97492088916001,13.308321291165,9.48166923554961,3.99208904972012,14.3367090447332,2.2490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| ||
|short_description=p4@TPBG | |short_description=p4@TPBG | ||
}} | }} |
Latest revision as of 23:26, 19 September 2015
Short description: | p4@TPBG |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_TPBG_5end |
Coexpression cluster: | C4630_mesenchymal_Smooth_Adipocyte_Fibroblast_Preadipocyte_Skeletal_Sertoli |
Association with transcript: | 98bp_to_ENST00000535040, NM_006670, uc003pjn.3_5end |
EntrezGene: | TPBG |
HGNC: | 12004 |
UniProt: | A8K555Q13641 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 4.66e-25 | 76 |
skin fibroblast | 6.23e-25 | 23 |
stem cell | 3.88e-19 | 441 |
somatic stem cell | 4.15e-18 | 433 |
multi fate stem cell | 1.77e-17 | 427 |
muscle cell | 2.22e-17 | 55 |
muscle precursor cell | 5.28e-16 | 58 |
myoblast | 5.28e-16 | 58 |
multi-potent skeletal muscle stem cell | 5.28e-16 | 58 |
electrically responsive cell | 9.05e-15 | 61 |
electrically active cell | 9.05e-15 | 61 |
smooth muscle cell | 4.28e-12 | 43 |
smooth muscle myoblast | 4.28e-12 | 43 |
fibroblast of dermis | 2.63e-10 | 6 |
cell of skeletal muscle | 9.13e-10 | 9 |
mesenchymal stem cell of adipose | 2.39e-09 | 8 |
aortic smooth muscle cell | 4.78e-09 | 10 |
vascular associated smooth muscle cell | 2.24e-08 | 32 |
mesenchymal cell | 2.94e-07 | 354 |
cardiac mesenchymal cell | 3.92e-07 | 4 |
migratory trunk neural crest cell | 3.92e-07 | 4 |
motile cell | 7.34e-07 | 386 |
connective tissue cell | 9.04e-07 | 361 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 3.64e-19 | 14 |
musculoskeletal system disease | 2.12e-08 | 5 |
myotonic disease | 2.12e-08 | 5 |
muscle tissue disease | 2.12e-08 | 5 |
myopathy | 2.12e-08 | 5 |
muscular disease | 2.12e-08 | 5 |
myotonic dystrophy | 2.12e-08 | 5 |
female reproductive organ cancer | 4.57e-08 | 27 |
reproductive organ cancer | 2.88e-07 | 29 |