FFCP PHASE1:Hg19::chr15:71404993..71404999,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr15:71404993..71404999,-
|short_description=p@chr15:71404993..71404999,-
|description=CAGE_peak_at_chr15:71404993..71404999,-
|association_with_transcript=NA
...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr15:71404993..71404999,- | |||
|description=CAGE_peak_at_chr15:71404993..71404999,- | |||
|id=chr15:71404993..71404999,- | |||
|ontology_enrichment_celltype=CL:0000066!4.21e-14!254;CL:0002321!2.95e-12!248;CL:0000220!4.69e-12!246;CL:0002076!1.30e-09!43;CL:0000548!1.27e-08!679;CL:0000004!1.27e-08!679;CL:0000255!1.27e-08!679;CL:0000012!2.36e-08!682;CL:0002368!4.42e-08!13;CL:0002202!2.46e-07!9;CL:0002632!2.46e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0002589;5.78e-12;2!CL:0000307;1.25e-08;3!CL:1001319;2.42e-07;1!CL:1000600;2.42e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002589,1.75e-11,2;CL:0000068,1.28e-08,3;CL:0000069,1.28e-08,3;CL:0000307,1.28e-08,3;CL:0000377,1.28e-08,3;CL:1001319,2.36e-07,1;CL:1000600,2.36e-07,1 | |||
|ontology_enrichment_development_v019=UBERON:0009847;7.19e-09;3!UBERON:0003353;7.19e-09;3!CL:0000377;1.25e-08;3 | |||
|ontology_enrichment_disease=DOID:14566!2.86e-14!239;DOID:162!3.23e-14!235;DOID:0050687!6.51e-14!143;DOID:305!2.29e-09!106 | |||
|ontology_enrichment_disease_v019=DOID:3112;8.23e-07;1!DOID:6193;8.23e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:6193,7.57e-07,1 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0001529;5.78e-12;2!UBERON:0007204;5.78e-12;2!UBERON:0004645;2.42e-07;1!UBERON:0001256;2.42e-07;1!UBERON:0001259;2.42e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001529,1.75e-11,2;UBERON:0007204,1.75e-11,2;UBERON:0004645,2.36e-07,1;UBERON:0001256,2.36e-07,1;UBERON:0001259,2.36e-07,1;UBERON:0000076,6.30e-07,8 | |||
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| ||
|short_description=p@chr15:71404993..71404999,- | |||
}} | }} |
Latest revision as of 03:54, 25 July 2015
Short description: | p@chr15:71404993..71404999, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr15:71404993..71404999, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of the brachiocephalic vasculature | 1.75e-11 | 2 |
duct epithelial cell | 1.28e-08 | 3 |
branched duct epithelial cell | 1.28e-08 | 3 |
tracheal epithelial cell | 1.28e-08 | 3 |
tracheoblast | 1.28e-08 | 3 |
bladder cell | 2.36e-07 | 1 |
lower urinary tract cell | 2.36e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
brachiocephalic artery | 1.75e-11 | 2 |
brachiocephalic vasculature | 1.75e-11 | 2 |
urinary bladder urothelium | 2.36e-07 | 1 |
wall of urinary bladder | 2.36e-07 | 1 |
mucosa of urinary bladder | 2.36e-07 | 1 |
external ectoderm | 6.30e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
epithelioid sarcoma | 7.57e-07 | 1 |