FFCP PHASE1:Hg19::chr7:148133853..148133864,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr7:148133853..148133864,- | |||
|coexpression_cluster_id=C2250 | |||
|description=CAGE_peak_at_chr7:148133853..148133864,- | |description=CAGE_peak_at_chr7:148133853..148133864,- | ||
|id=chr7:148133853..148133864,- | |id=chr7:148133853..148133864,- | ||
|ontology_enrichment_celltype=CL:0000945!1.05e-51!24;CL:0000826!1.05e-51!24;CL:0000236!6.65e-49!14;CL:0000838!3.42e-24!52;CL:0000542!1.21e-23!53;CL:0000051!1.21e-23!53;CL:0002087!1.99e-12!119;CL:0000842!2.62e-12!3;CL:0000738!7.45e-11!140;CL:0000224!2.39e-09!4;CL:0000785!3.23e-09!2;CL:0000955!3.23e-09!2;CL:0000818!3.23e-09!2;CL:0000954!3.23e-09!2;CL:0000816!3.23e-09!2;CL:0002031!2.15e-08!124;CL:0000037!7.88e-08!172;CL:0000566!7.88e-08!172;CL:0000988!4.12e-07!182 | |ontology_enrichment_celltype=CL:0000945!1.05e-51!24;CL:0000826!1.05e-51!24;CL:0000236!6.65e-49!14;CL:0000838!3.42e-24!52;CL:0000542!1.21e-23!53;CL:0000051!1.21e-23!53;CL:0002087!1.99e-12!119;CL:0000842!2.62e-12!3;CL:0000738!7.45e-11!140;CL:0000224!2.39e-09!4;CL:0000785!3.23e-09!2;CL:0000955!3.23e-09!2;CL:0000818!3.23e-09!2;CL:0000954!3.23e-09!2;CL:0000816!3.23e-09!2;CL:0002031!2.15e-08!124;CL:0000037!7.88e-08!172;CL:0000566!7.88e-08!172;CL:0000988!4.12e-07!182 | ||
|ontology_enrichment_celltype_v019=CL:0000236;3.43e-109;13!CL:0000945;1.38e-68;24!CL:0000542;6.50e-28;53!CL:0000785;1.78e-11;1!CL:0000819;1.78e-11;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000236,3.28e-101,14;CL:0000945,1.50e-68,24;CL:0000826,1.50e-68,24;CL:0000838,8.55e-36,52;CL:0000542,4.42e-35,53;CL:0000051,4.42e-35,53;CL:0002087,6.99e-15,115;CL:0002031,3.54e-14,120;CL:0000738,2.90e-12,136;CL:0000819,1.78e-11,1;CL:0002032,4.99e-10,161;CL:0000837,4.99e-10,161;CL:0000037,1.61e-09,168;CL:0000988,6.33e-09,177 | |||
|ontology_enrichment_development_v019=CL:0000051;6.50e-28;53 | |||
|ontology_enrichment_disease=DOID:0060058!8.23e-07!10 | |||
|ontology_enrichment_disease_v019=DOID:0060073;1.78e-11;1!DOID:8675;1.78e-11;1!DOID:0060058;1.06e-09;10 | |||
|ontology_enrichment_disease_v019_2=DOID:0060073,1.78e-11,1;DOID:8675,1.78e-11,1;DOID:0060058,1.01e-09,10 | |||
|ontology_enrichment_uberon=UBERON:0000178!4.86e-12!15;UBERON:0000179!4.86e-12!15;UBERON:0000463!4.86e-12!15 | |ontology_enrichment_uberon=UBERON:0000178!4.86e-12!15;UBERON:0000179!4.86e-12!15;UBERON:0000463!4.86e-12!15 | ||
|ontology_enrichment_uberon_v019=UBERON:0002372;4.91e-11;1!UBERON:0001961;4.91e-11;1!UBERON:0001744;4.91e-11;1!UBERON:0001042;4.91e-11;1!UBERON:0001735;4.91e-11;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002372,4.01e-11,1;UBERON:0001961,4.01e-11,1;UBERON:0001744,4.01e-11,1;UBERON:0001735,4.01e-11,1 | |||
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| ||
|short_description=p@chr7:148133853..148133864,- | |short_description=p@chr7:148133853..148133864,- | ||
}} | }} |
Latest revision as of 07:12, 31 July 2015
Short description: | p@chr7:148133853..148133864, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr7:148133853..148133864, - |
Coexpression cluster: | C2250_adult_CD19_lymphangiectasia_diffuse_lymphoma_tonsil_Whole |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
B cell | 3.28e-101 | 14 |
lymphocyte of B lineage | 1.50e-68 | 24 |
pro-B cell | 1.50e-68 | 24 |
lymphoid lineage restricted progenitor cell | 8.55e-36 | 52 |
lymphocyte | 4.42e-35 | 53 |
common lymphoid progenitor | 4.42e-35 | 53 |
nongranular leukocyte | 6.99e-15 | 115 |
hematopoietic lineage restricted progenitor cell | 3.54e-14 | 120 |
leukocyte | 2.90e-12 | 136 |
B-1 B cell | 1.78e-11 | 1 |
hematopoietic oligopotent progenitor cell | 4.99e-10 | 161 |
hematopoietic multipotent progenitor cell | 4.99e-10 | 161 |
hematopoietic stem cell | 1.61e-09 | 168 |
hematopoietic cell | 6.33e-09 | 177 |
Ontology term | p-value | n |
---|---|---|
tonsil | 4.01e-11 | 1 |
mucosa-associated lymphoid tissue | 4.01e-11 | 1 |
lymphoid tissue | 4.01e-11 | 1 |
tonsillar ring | 4.01e-11 | 1 |
Ontology term | p-value | n |
---|---|---|
lymphatic system cancer | 1.78e-11 | 1 |
lymphosarcoma | 1.78e-11 | 1 |
lymphoma | 1.01e-09 | 10 |