FFCP PHASE1:Hg19::chr15:81585055..81585070,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr15:81585055..81585070,+
|short_description=p12@IL16
|description=CAGE_peak_12_at_IL16_5end
|association_with_transcript=460bp_to_AK126222_5end
|EntrezGene=3...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=3603 | |EntrezGene=3603 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=5980 | |HGNC=5980 | ||
|TSSclassifier=strong | |||
|UniProt=Q6ZTT5 | |UniProt=Q6ZTT5 | ||
|association_with_transcript=460bp_to_AK126222_5end | |||
|cluster_id=chr15:81585055..81585070,+ | |||
|coexpression_cluster_id=C47 | |||
|description=CAGE_peak_12_at_IL16_5end | |||
|id=chr15:81585055..81585070,+ | |||
|ontology_enrichment_celltype=CL:0002087!4.03e-47!119;CL:0000945!4.80e-46!24;CL:0000826!4.80e-46!24;CL:0000738!8.20e-46!140;CL:0002031!1.75e-39!124;CL:0000542!4.07e-39!53;CL:0000051!4.07e-39!53;CL:0000838!1.33e-37!52;CL:0000037!5.09e-34!172;CL:0000566!5.09e-34!172;CL:0002032!4.11e-32!165;CL:0000837!4.11e-32!165;CL:0000988!3.43e-31!182;CL:0000236!7.30e-31!14;CL:0002057!4.59e-18!42;CL:0000860!1.90e-16!45;CL:0000624!6.90e-12!6;CL:0002009!1.96e-10!65;CL:0000766!5.34e-10!76;CL:0002194!8.07e-10!63;CL:0000576!8.07e-10!63;CL:0000040!8.07e-10!63;CL:0000559!8.07e-10!63;CL:0000557!4.44e-09!71;CL:0000134!2.60e-08!358;CL:0000839!2.60e-08!70;CL:0002320!7.25e-08!365;CL:0000817!3.80e-07!3;CL:0000898!7.40e-07!3;CL:0000219!9.34e-07!390 | |||
|ontology_enrichment_celltype_v019=CL:0000945;5.25e-91;24!CL:0000236;5.88e-64;13!CL:0000542;8.26e-25;53!CL:0000946;1.81e-08;1!CL:0000786;1.81e-08;1!CL:0002087;4.23e-08;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,2.34e-91,24;CL:0000826,2.34e-91,24;CL:0000236,8.18e-71,14;CL:0000838,2.52e-40,52;CL:0000542,1.69e-39,53;CL:0000051,1.69e-39,53;CL:0002087,1.33e-22,115;CL:0002031,1.68e-21,120;CL:0000738,1.54e-20,136;CL:0002032,1.01e-16,161;CL:0000837,1.01e-16,161;CL:0000037,7.41e-16,168;CL:0000988,7.66e-15,177;CL:0000946,2.17e-08,1;CL:0000786,2.17e-08,1;CL:0000980,2.17e-08,1 | |||
|ontology_enrichment_development_v019=CL:0000051;8.26e-25;53!UBERON:0001045;1.81e-08;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:630;4.25e-08;1!DOID:0050177;4.25e-08;1!DOID:0050427;4.25e-08;1 | |||
|ontology_enrichment_disease_v019_2=DOID:630,5.07e-08,1;DOID:0050177,5.07e-08,1;DOID:0050427,5.07e-08,1 | |||
|ontology_enrichment_uberon=UBERON:0002390!4.78e-17!102;UBERON:0003061!4.78e-17!102;UBERON:0002193!5.23e-17!112;UBERON:0000178!1.42e-09!15;UBERON:0000179!1.42e-09!15;UBERON:0000463!1.42e-09!15;UBERON:0002405!5.82e-08!115;UBERON:0002371!1.89e-07!80;UBERON:0002384!2.90e-07!375;UBERON:0004177!4.95e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0001154;1.81e-08;1!UBERON:0001153;1.81e-08;1!UBERON:0009854;1.81e-08;1!UBERON:0002372;4.25e-08;1!UBERON:0001961;4.25e-08;1!UBERON:0001744;4.25e-08;1!UBERON:0001042;4.25e-08;1!UBERON:0001735;4.25e-08;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001154,1.75e-08,1;UBERON:0001153,1.75e-08,1;UBERON:0001045,1.75e-08,1;UBERON:0002372,3.83e-08,1;UBERON:0001961,3.83e-08,1;UBERON:0001744,3.83e-08,1;UBERON:0001735,3.83e-08,1 | |||
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| ||
|short_description=p12@IL16 | |||
}} | }} |
Latest revision as of 10:33, 19 September 2015
Short description: | p12@IL16 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_12_at_IL16_5end |
Coexpression cluster: | C47_CD19_Burkitt_acute_xeroderma_tonsil_lymphoma_appendix |
Association with transcript: | 460bp_to_AK126222_5end |
EntrezGene: | IL16 |
HGNC: | 5980 |
UniProt: | Q6ZTT5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 2.34e-91 | 24 |
pro-B cell | 2.34e-91 | 24 |
B cell | 8.18e-71 | 14 |
lymphoid lineage restricted progenitor cell | 2.52e-40 | 52 |
lymphocyte | 1.69e-39 | 53 |
common lymphoid progenitor | 1.69e-39 | 53 |
nongranular leukocyte | 1.33e-22 | 115 |
hematopoietic lineage restricted progenitor cell | 1.68e-21 | 120 |
leukocyte | 1.54e-20 | 136 |
hematopoietic oligopotent progenitor cell | 1.01e-16 | 161 |
hematopoietic multipotent progenitor cell | 1.01e-16 | 161 |
hematopoietic stem cell | 7.41e-16 | 168 |
hematopoietic cell | 7.66e-15 | 177 |
antibody secreting cell | 2.17e-08 | 1 |
plasma cell | 2.17e-08 | 1 |
plasmablast | 2.17e-08 | 1 |
Ontology term | p-value | n |
---|---|---|
vermiform appendix | 1.75e-08 | 1 |
caecum | 1.75e-08 | 1 |
midgut | 1.75e-08 | 1 |
tonsil | 3.83e-08 | 1 |
mucosa-associated lymphoid tissue | 3.83e-08 | 1 |
lymphoid tissue | 3.83e-08 | 1 |
tonsillar ring | 3.83e-08 | 1 |
Ontology term | p-value | n |
---|---|---|
genetic disease | 5.07e-08 | 1 |
monogenic disease | 5.07e-08 | 1 |
xeroderma pigmentosum | 5.07e-08 | 1 |