FFCP PHASE1:Hg19::chr3:55524257..55524260,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7474 | |EntrezGene=7474 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12784 | |HGNC=12784 | ||
|TSSclassifier=strong | |||
|UniProt=P41221 | |UniProt=P41221 | ||
|association_with_transcript=-284bp_to_ENST00000474267_5end | |association_with_transcript=-284bp_to_ENST00000474267_5end | ||
|cluster_id=chr3:55524257..55524260,- | |||
|description=CAGE_peak_41_at_WNT5A_5end | |description=CAGE_peak_41_at_WNT5A_5end | ||
|id=chr3:55524257..55524260,- | |id=chr3:55524257..55524260,- | ||
|ontology_enrichment_celltype=CL:0002536!6.30e-07!2 | |ontology_enrichment_celltype=CL:0002536!6.30e-07!2 | ||
|ontology_enrichment_celltype_v019=CL:0002231;8.17e-11;3!CL:0000306;1.96e-08;4!CL:0002222;1.96e-08;4!CL:0002224;1.96e-08;4!CL:0000244;2.43e-08;4!CL:0000731;2.43e-08;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002231,8.17e-11,3;CL:0000306,1.82e-08,4;CL:0002222,1.82e-08,4;CL:0002224,1.82e-08,4;CL:0000244,2.43e-08,4;CL:0000731,2.43e-08,4 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:171;2.00e-12;10!DOID:5409;2.43e-08;4 | |||
|ontology_enrichment_disease_v019_2=DOID:171,2.12e-12,10;DOID:5409,2.26e-08,4 | |||
|ontology_enrichment_uberon=UBERON:0000162!1.56e-07!14;UBERON:0001353!1.56e-07!14;UBERON:0000163!1.56e-07!14;UBERON:0006866!1.56e-07!14;UBERON:0000164!1.56e-07!14;UBERON:0000931!1.56e-07!14;UBERON:0001255!2.16e-07!2;UBERON:0001556!2.16e-07!2;UBERON:0005631!3.40e-07!14;UBERON:0000158!3.40e-07!14;UBERON:0000305!4.59e-07!7;UBERON:0004122!5.57e-07!15 | |ontology_enrichment_uberon=UBERON:0000162!1.56e-07!14;UBERON:0001353!1.56e-07!14;UBERON:0000163!1.56e-07!14;UBERON:0006866!1.56e-07!14;UBERON:0000164!1.56e-07!14;UBERON:0000931!1.56e-07!14;UBERON:0001255!2.16e-07!2;UBERON:0001556!2.16e-07!2;UBERON:0005631!3.40e-07!14;UBERON:0000158!3.40e-07!14;UBERON:0000305!4.59e-07!7;UBERON:0004122!5.57e-07!15 | ||
|ontology_enrichment_uberon_v019=UBERON:0002346;2.06e-29;4!UBERON:0000923;2.06e-29;4!UBERON:0010316;2.06e-29;4!UBERON:0005291;2.06e-29;4!UBERON:0000996;3.16e-29;1!UBERON:0002050;9.08e-24;5!UBERON:0005423;9.08e-24;5!UBERON:0010077;1.96e-08;4!UBERON:0005389;1.96e-08;4!UBERON:0000484;1.96e-08;4!UBERON:0000965;1.96e-08;4!UBERON:0001803;1.96e-08;4!UBERON:0000365;6.39e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000996,4.20e-29,1;UBERON:0000162,4.75e-09,14;UBERON:0001353,4.75e-09,14;UBERON:0000163,4.75e-09,14;UBERON:0006866,4.75e-09,14;UBERON:0000164,4.75e-09,14;UBERON:0000931,4.75e-09,14;UBERON:0004122,1.65e-08,15;UBERON:0010077,1.82e-08,4;UBERON:0005389,1.82e-08,4;UBERON:0000484,1.82e-08,4;UBERON:0002546,1.82e-08,4;UBERON:0000965,1.82e-08,4;UBERON:0001803,1.82e-08,4;UBERON:0003073,1.82e-08,4;UBERON:0005426,1.82e-08,4;UBERON:0000365,6.39e-07,5;UBERON:0001046,6.57e-07,19 | |||
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| ||
|short_description=p41@WNT5A | |short_description=p41@WNT5A | ||
}} | }} |
Latest revision as of 03:17, 19 September 2015
Short description: | p41@WNT5A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_41_at_WNT5A_5end |
Coexpression cluster: | NA |
Association with transcript: | -284bp_to_ENST00000474267_5end |
EntrezGene: | WNT5A |
HGNC: | 12784 |
UniProt: | P41221 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of prostate | 8.17e-11 | 3 |
crystallin accumulating cell | 1.82e-08 | 4 |
vertebrate lens cell | 1.82e-08 | 4 |
lens epithelial cell | 1.82e-08 | 4 |
transitional epithelial cell | 2.43e-08 | 4 |
urothelial cell | 2.43e-08 | 4 |
Ontology term | p-value | n |
---|---|---|
vagina | 4.20e-29 | 1 |
cloaca | 4.75e-09 | 14 |
anal region | 4.75e-09 | 14 |
embryonic cloaca | 4.75e-09 | 14 |
terminal part of digestive tract | 4.75e-09 | 14 |
primitive urogenital sinus | 4.75e-09 | 14 |
proctodeum | 4.75e-09 | 14 |
genitourinary system | 1.65e-08 | 15 |
cuboidal epithelium | 1.82e-08 | 4 |
transparent eye structure | 1.82e-08 | 4 |
simple cuboidal epithelium | 1.82e-08 | 4 |
cranial placode | 1.82e-08 | 4 |
lens of camera-type eye | 1.82e-08 | 4 |
epithelium of lens | 1.82e-08 | 4 |
lens placode | 1.82e-08 | 4 |
lens vesicle | 1.82e-08 | 4 |
urothelium | 6.39e-07 | 5 |
hindgut | 6.57e-07 | 19 |
Ontology term | p-value | n |
---|---|---|
neuroectodermal tumor | 2.12e-12 | 10 |
lung small cell carcinoma | 2.26e-08 | 4 |