FFCP PHASE1:Hg19::chr3:57960752..57960764,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr3:57960752..57960764,- | |||
|description=CAGE_peak_at_chr3:57960752..57960764,- | |description=CAGE_peak_at_chr3:57960752..57960764,- | ||
|id=chr3:57960752..57960764,- | |id=chr3:57960752..57960764,- | ||
|ontology_enrichment_celltype=CL:0000066!9.58e-08!254 | |ontology_enrichment_celltype=CL:0000066!9.58e-08!254 | ||
|ontology_enrichment_celltype_v019=CL:0000222;3.28e-23;1!CL:0000319;3.28e-23;1!CL:0002097;1.65e-12;2!CL:0000159;2.59e-12;2!CL:0002593;2.59e-12;2!CL:0000174;8.96e-09;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000319,3.28e-23,1;CL:0002097,1.65e-12,2;CL:0000159,2.59e-12,2;CL:0002593,3.62e-12,2;CL:0000174,8.96e-09,3 | |||
|ontology_enrichment_development_v019=UBERON:0009847;1.98e-30;3!UBERON:0003353;1.98e-30;3!UBERON:0006238;5.86e-09;10 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3030;3.28e-23;1!DOID:3093;2.75e-08;11 | |||
|ontology_enrichment_disease_v019_2=DOID:3030,3.28e-23,1;DOID:3093,2.85e-08,11 | |||
|ontology_enrichment_uberon=UBERON:0000162!2.08e-10!14;UBERON:0001353!2.08e-10!14;UBERON:0000163!2.08e-10!14;UBERON:0006866!2.08e-10!14;UBERON:0000164!2.08e-10!14;UBERON:0000931!2.08e-10!14;UBERON:0002367!1.40e-09!11;UBERON:0010147!1.40e-09!11;UBERON:0009846!1.40e-09!11;UBERON:0003353!1.40e-09!11;UBERON:0004902!1.40e-09!11;UBERON:0003820!1.40e-09!11;UBERON:0009847!1.40e-09!11;UBERON:0004122!1.54e-09!15;UBERON:0003937!1.29e-08!12;UBERON:0005399!1.29e-08!12;UBERON:0003064!1.22e-07!37;UBERON:0006554!2.00e-07!44;UBERON:0001008!3.73e-07!45;UBERON:0001046!5.36e-07!19 | |ontology_enrichment_uberon=UBERON:0000162!2.08e-10!14;UBERON:0001353!2.08e-10!14;UBERON:0000163!2.08e-10!14;UBERON:0006866!2.08e-10!14;UBERON:0000164!2.08e-10!14;UBERON:0000931!2.08e-10!14;UBERON:0002367!1.40e-09!11;UBERON:0010147!1.40e-09!11;UBERON:0009846!1.40e-09!11;UBERON:0003353!1.40e-09!11;UBERON:0004902!1.40e-09!11;UBERON:0003820!1.40e-09!11;UBERON:0009847!1.40e-09!11;UBERON:0004122!1.54e-09!15;UBERON:0003937!1.29e-08!12;UBERON:0005399!1.29e-08!12;UBERON:0003064!1.22e-07!37;UBERON:0006554!2.00e-07!44;UBERON:0001008!3.73e-07!45;UBERON:0001046!5.36e-07!19 | ||
|ontology_enrichment_uberon_v019=UBERON:0002456;2.59e-12;2!UBERON:0002367;4.80e-09;11!UBERON:0010147;4.80e-09;11!UBERON:0002369;8.96e-09;3!UBERON:0001235;8.96e-09;3!UBERON:0006858;8.96e-09;3!UBERON:0003937;2.29e-08;12!UBERON:0005399;2.29e-08;12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002456,3.62e-12,2;UBERON:0002367,5.00e-09,11;UBERON:0010147,5.00e-09,11;UBERON:0009846,5.00e-09,11;UBERON:0003353,5.00e-09,11;UBERON:0004902,5.00e-09,11;UBERON:0003820,5.00e-09,11;UBERON:0009847,5.00e-09,11;UBERON:0002369,8.96e-09,3;UBERON:0001235,8.96e-09,3;UBERON:0006858,8.96e-09,3;UBERON:0003937,2.37e-08,12;UBERON:0005399,2.37e-08,12;UBERON:0003064,8.59e-08,28;UBERON:0000162,2.77e-07,14;UBERON:0001353,2.77e-07,14;UBERON:0000163,2.77e-07,14;UBERON:0006866,2.77e-07,14;UBERON:0000164,2.77e-07,14;UBERON:0000931,2.77e-07,14;UBERON:0004122,7.41e-07,15 | |||
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| ||
|short_description=p@chr3:57960752..57960764,- | |short_description=p@chr3:57960752..57960764,- | ||
}} | }} |
Latest revision as of 22:51, 29 July 2015
Short description: | p@chr3:57960752..57960764, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:57960752..57960764, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mucus secreting cell | 3.28e-23 | 1 |
cortical cell of adrenal gland | 1.65e-12 | 2 |
seromucus secreting cell | 2.59e-12 | 2 |
smooth muscle cell of the internal thoracic artery | 3.62e-12 | 2 |
steroid hormone secreting cell | 8.96e-09 | 3 |
Ontology term | p-value | n |
---|---|---|
internal thoracic artery | 3.62e-12 | 2 |
prostate gland | 5.00e-09 | 11 |
male accessory sex gland | 5.00e-09 | 11 |
embryonic cloacal epithelium | 5.00e-09 | 11 |
epithelium of hindgut | 5.00e-09 | 11 |
urogenital sinus epithelium | 5.00e-09 | 11 |
prostate bud | 5.00e-09 | 11 |
prostate field | 5.00e-09 | 11 |
adrenal gland | 8.96e-09 | 3 |
adrenal cortex | 8.96e-09 | 3 |
adrenal/interrenal gland | 8.96e-09 | 3 |
sex gland | 2.37e-08 | 12 |
male reproductive gland | 2.37e-08 | 12 |
intermediate mesoderm | 8.59e-08 | 28 |
cloaca | 2.77e-07 | 14 |
anal region | 2.77e-07 | 14 |
embryonic cloaca | 2.77e-07 | 14 |
terminal part of digestive tract | 2.77e-07 | 14 |
primitive urogenital sinus | 2.77e-07 | 14 |
proctodeum | 2.77e-07 | 14 |
genitourinary system | 7.41e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
mucinous adenocarcinoma | 3.28e-23 | 1 |
nervous system cancer | 2.85e-08 | 11 |