FFCP PHASE1:Hg19::chr3:98700196..98700204,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=294bp_to_ENST00000473756_5end | |association_with_transcript=294bp_to_ENST00000473756_5end | ||
|cluster_id=chr3:98700196..98700204,+ | |||
|coexpression_cluster_id=C1081 | |||
|description=CAGE_peak_9_at_ENST00000473756_5end | |description=CAGE_peak_9_at_ENST00000473756_5end | ||
|id=chr3:98700196..98700204,+ | |id=chr3:98700196..98700204,+ | ||
|ontology_enrichment_celltype=CL:0000359!2.58e-08!32;CL:1000497!1.05e-07!18;CL:0002518!1.05e-07!18;CL:1000507!1.11e-07!12;CL:1000494!1.11e-07!12;CL:0002539!1.65e-07!10;CL:0002166!3.25e-07!3;CL:1000449!4.79e-07!16;CL:0000548!7.55e-07!679;CL:0000004!7.55e-07!679;CL:0000255!7.55e-07!679;CL:0002681!8.52e-07!13;CL:0002584!8.52e-07!13 | |ontology_enrichment_celltype=CL:0000359!2.58e-08!32;CL:1000497!1.05e-07!18;CL:0002518!1.05e-07!18;CL:1000507!1.11e-07!12;CL:1000494!1.11e-07!12;CL:0002539!1.65e-07!10;CL:0002166!3.25e-07!3;CL:1000449!4.79e-07!16;CL:0000548!7.55e-07!679;CL:0000004!7.55e-07!679;CL:0000255!7.55e-07!679;CL:0002681!8.52e-07!13;CL:0002584!8.52e-07!13 | ||
|ontology_enrichment_celltype_v019=CL:0002379;3.54e-13;1!CL:1000507;4.23e-11;10!CL:1000494;4.23e-11;10!CL:0002539;4.70e-11;10!CL:0000097;1.30e-10;5!CL:1000449;1.42e-07;15!CL:1000415;3.18e-07;2!CL:1000497;9.68e-07;17!CL:0002518;9.68e-07;17 | |||
|ontology_enrichment_celltype_v019_2=CL:0002379,3.76e-13,1;CL:0002539,4.31e-11,10;CL:1000507,5.12e-11,10;CL:1000494,5.12e-11,10;CL:0000097,1.27e-10,5;CL:0002028,1.27e-10,5;CL:1000449,1.61e-07,15;CL:1000415,2.91e-07,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2394!5.68e-13!14;DOID:120!2.94e-08!27;DOID:193!1.71e-07!29 | |ontology_enrichment_disease=DOID:2394!5.68e-13!14;DOID:120!2.94e-08!27;DOID:193!1.71e-07!29 | ||
|ontology_enrichment_disease_v019=DOID:3620;3.54e-13;1!DOID:3565;3.54e-13;1!DOID:4929;2.28e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3620,3.76e-13,1;DOID:3565,3.76e-13,1;DOID:4929,2.28e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0005256!3.17e-09!143;UBERON:0000058!9.22e-09!26;UBERON:0004573!5.90e-08!33;UBERON:0004571!5.90e-08!33;UBERON:0001637!9.47e-08!42;UBERON:0003509!9.47e-08!42;UBERON:0004572!9.47e-08!42;UBERON:0009773!1.11e-07!12;UBERON:0001231!1.11e-07!12;UBERON:0004810!1.11e-07!12;UBERON:0003914!1.50e-07!118;UBERON:0004237!1.65e-07!10;UBERON:0004695!1.65e-07!10;UBERON:0002111!1.65e-07!10;UBERON:0004178!1.65e-07!10;UBERON:0004211!4.79e-07!16;UBERON:0001285!4.79e-07!16;UBERON:0007684!4.79e-07!16;UBERON:0003220!4.79e-07!16;UBERON:0004208!4.79e-07!16;UBERON:0000486!7.42e-07!82;UBERON:0001225!8.52e-07!13;UBERON:0008987!8.52e-07!13;UBERON:0000992!9.65e-07!13;UBERON:0001851!9.88e-07!16 | |ontology_enrichment_uberon=UBERON:0005256!3.17e-09!143;UBERON:0000058!9.22e-09!26;UBERON:0004573!5.90e-08!33;UBERON:0004571!5.90e-08!33;UBERON:0001637!9.47e-08!42;UBERON:0003509!9.47e-08!42;UBERON:0004572!9.47e-08!42;UBERON:0009773!1.11e-07!12;UBERON:0001231!1.11e-07!12;UBERON:0004810!1.11e-07!12;UBERON:0003914!1.50e-07!118;UBERON:0004237!1.65e-07!10;UBERON:0004695!1.65e-07!10;UBERON:0002111!1.65e-07!10;UBERON:0004178!1.65e-07!10;UBERON:0004211!4.79e-07!16;UBERON:0001285!4.79e-07!16;UBERON:0007684!4.79e-07!16;UBERON:0003220!4.79e-07!16;UBERON:0004208!4.79e-07!16;UBERON:0000486!7.42e-07!82;UBERON:0001225!8.52e-07!13;UBERON:0008987!8.52e-07!13;UBERON:0000992!9.65e-07!13;UBERON:0001851!9.88e-07!16 | ||
|ontology_enrichment_uberon_v019=UBERON:0004913;1.82e-13;1!UBERON:0003703;1.82e-13;1!UBERON:0001174;1.82e-13;1!UBERON:0004914;1.82e-13;1!UBERON:0004211;4.23e-11;10!UBERON:0009773;4.23e-11;10!UBERON:0001231;4.23e-11;10!UBERON:0004810;4.23e-11;10!UBERON:0004237;4.70e-11;10!UBERON:0004695;4.70e-11;10!UBERON:0002111;4.70e-11;10!UBERON:0004178;4.70e-11;10!UBERON:0000947;3.49e-09;21!UBERON:0010191;3.49e-09;21!UBERON:0004573;2.16e-08;33!UBERON:0004571;2.16e-08;33!UBERON:0002294;9.09e-08;7!UBERON:0001173;9.09e-08;7!UBERON:0006555;1.42e-07;15!UBERON:0004819;1.42e-07;15!UBERON:0001285;1.42e-07;15!UBERON:0007684;1.42e-07;15!UBERON:0001135;1.52e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004913,1.82e-13,1;UBERON:0003703,1.82e-13,1;UBERON:0001174,1.82e-13,1;UBERON:0004914,1.82e-13,1;UBERON:0004237,4.31e-11,10;UBERON:0004695,4.31e-11,10;UBERON:0002111,4.31e-11,10;UBERON:0004178,4.31e-11,10;UBERON:0004810,5.12e-11,10;UBERON:0000947,3.30e-09,21;UBERON:0010191,3.30e-09,21;UBERON:0004573,8.38e-09,33;UBERON:0004571,8.38e-09,33;UBERON:0003914,9.98e-09,117;UBERON:0001135,1.43e-07,15;UBERON:0004211,1.61e-07,15;UBERON:0009773,1.61e-07,15;UBERON:0001231,1.61e-07,15;UBERON:0001285,1.61e-07,15;UBERON:0007684,1.61e-07,15;UBERON:0004208,1.61e-07,15;UBERON:0006555,4.42e-07,16;UBERON:0004819,4.42e-07,16;UBERON:0001637,6.84e-07,42;UBERON:0003509,6.84e-07,42;UBERON:0004572,6.84e-07,42 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34465029290355,0.602694528023977,0.730310090387373,0.975865597581014,0.123121058076788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.378139268656271,0,0.175669571386252,0,0.364295288292542,0,0,0,0,0,0,0,0,0,0.347140501607594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.237093786023,0,0,0,0,0,0,0,0,0,0,0,0.624320153660641,0,0.149448680551801,0.23486899728753,0,0.140450806702248,0,0,0,0,0,0,0.718618141816238,0,0,0,0,0,0,0,0,0,0,0,0.206105058476878,0,0,0,0,0,0,0,0.355009592516614,0,0,0.193260853163297,0,0.286804595389004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0.219500570817251,0,0,0,0,0,0,0.34779121492523,0.469634776943287,0.144366447761074,0,0,0,0,0,0,0,0.93733833986777,1.84780341018745,0.425325291727159,0,0.290633938513962,0,7.38994856843915,3.52193736052904,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258543431515556,0,0,0,0,0,0,0,0,0,0,0,0,0,0.904318131178758,0,0,0,0,0,0,0,0,0,0,0.358121926479791,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.813795071099207,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246381468041427,0,0.116210378459959,0,0.601519410909855,0,0.114814448164607,0.182091168006717,0,0.451199612907412,1.00119938235739,0,0,3.16654886678627,0,0,0.431831832204279,0,0.270946437543853,0.501689773854853,1.01950509218015,0,0.447749509444357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165284915360978,0,0,0,1.39453664789186,2.20368642781448,0,0,0,0,0.37064843820784,0.429374660225974,0,0,0,0,0,0.636406495851874,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32687795048244,0.876901770507525,0,0,0.608731130888112,0,0.845086807596724,0,0,0,0.354761064070598,0,0,0,0,0,0,0,0,0.43050537267123,0,0,0.918893600827838,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284136146806413,0,0,0,0,0,0.779160935160341,0,0,0,0,0,0,0,0,0.988551862620595,0,0,0,0,0,0,0,0,0,0,0,0,0.254253650292766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.632994193584081,0.326465616318295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137041924646751,0,0,0,2.72539988855215,0,0,0,0,0,0.576219191952599,0.745515213392595,0,0.271808412147228,0.523014231561666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.105600336519406,0,0.191915197319445,0,0,0,0,2.5926644736038,0.979762080328227,0,0.082092520749339,0.340776043570843,0,0,0,0,0,0.342173675768659,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.35265819698172,0,0,0.149254802886874,0.233713309847224,0,0,0,0,0.228840068396924,0,0.15543720058278,0,0.318593534327405,0,0.621051827505038,0.829412415681711,1.32920857278997,0.521745061811734,0.450772826991655,0.761610424337591,0,0.727394636810238,0.322231671127465,0.928067519756987,0,0,0,0,0,0.192619830407303,0,0,0,0,0,0,0,0,0.353378291891762,0,0.337884881306145,0.76872455576384,0,0.303859956177382,0,0,0,0,0,0,0.422624246717254,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.0085253435176,0,0,0,5.02710693137954,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.47775168788705,0,0,0,0,0,0,0,0,0,0.118332000730565,0.0852134047591577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.352894871715692,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131862580613,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 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| ||
|short_description=p9@ENST00000473756 | |short_description=p9@ENST00000473756 | ||
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Latest revision as of 00:10, 30 July 2015
Short description: | p9@ENST00000473756 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_ENST00000473756_5end |
Coexpression cluster: | C1081_papillotubular_Renal_Mast_giant_meningioma_mucinous_gall |
Association with transcript: | 294bp_to_ENST00000473756_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
meningothelial cell | 3.76e-13 | 1 |
aortic smooth muscle cell | 4.31e-11 | 10 |
kidney tubule cell | 5.12e-11 | 10 |
nephron tubule epithelial cell | 5.12e-11 | 10 |
mast cell | 1.27e-10 | 5 |
basophil mast progenitor cell | 1.27e-10 | 5 |
epithelial cell of nephron | 1.61e-07 | 15 |
epithelial cell of gall bladder | 2.91e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
hepatopancreatic ampulla | 1.82e-13 | 1 |
extrahepatic bile duct | 1.82e-13 | 1 |
common bile duct | 1.82e-13 | 1 |
duodenal papilla | 1.82e-13 | 1 |
blood vessel smooth muscle | 4.31e-11 | 10 |
arterial system smooth muscle | 4.31e-11 | 10 |
artery smooth muscle tissue | 4.31e-11 | 10 |
aorta smooth muscle tissue | 4.31e-11 | 10 |
nephron tubule epithelium | 5.12e-11 | 10 |
aorta | 3.30e-09 | 21 |
aortic system | 3.30e-09 | 21 |
systemic artery | 8.38e-09 | 33 |
systemic arterial system | 8.38e-09 | 33 |
epithelial tube | 9.98e-09 | 117 |
smooth muscle tissue | 1.43e-07 | 15 |
nephron epithelium | 1.61e-07 | 15 |
renal tubule | 1.61e-07 | 15 |
nephron tubule | 1.61e-07 | 15 |
nephron | 1.61e-07 | 15 |
uriniferous tubule | 1.61e-07 | 15 |
nephrogenic mesenchyme | 1.61e-07 | 15 |
excretory tube | 4.42e-07 | 16 |
kidney epithelium | 4.42e-07 | 16 |
artery | 6.84e-07 | 42 |
arterial blood vessel | 6.84e-07 | 42 |
arterial system | 6.84e-07 | 42 |
Ontology term | p-value | n |
---|---|---|
central nervous system cancer | 3.76e-13 | 1 |
meningioma | 3.76e-13 | 1 |
tubular adenocarcinoma | 2.28e-07 | 2 |