FFCP PHASE1:Hg19::chr4:10118590..10118601,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9948 | |EntrezGene=9948 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12754 | |HGNC=12754 | ||
|TSSclassifier=strong | |||
|UniProt=O75083 | |UniProt=O75083 | ||
|association_with_transcript=-17bp_to_ENST00000382451,ENST00000382452,NM_005112,NM_017491,uc003gmf.2,uc003gmg.2_5end | |association_with_transcript=-17bp_to_ENST00000382451,ENST00000382452,NM_005112,NM_017491,uc003gmf.2,uc003gmg.2_5end | ||
|cluster_id=chr4:10118590..10118601,- | |||
|description=CAGE_peak_9_at_WDR1_5end | |description=CAGE_peak_9_at_WDR1_5end | ||
|id=chr4:10118590..10118601,- | |id=chr4:10118590..10118601,- | ||
|ontology_enrichment_celltype=CL:0000084!4.75e-07!25;CL:0000827!4.75e-07!25 | |ontology_enrichment_celltype=CL:0000084!4.75e-07!25;CL:0000827!4.75e-07!25 | ||
|ontology_enrichment_celltype_v019=CL:0000791;9.39e-08;18!CL:0000789;9.39e-08;18!CL:0002419;9.39e-08;18!CL:0000084;6.79e-07;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,3.33e-08,18;CL:0000789,3.33e-08,18;CL:0002420,3.33e-08,18;CL:0002419,3.33e-08,18;CL:0000790,3.33e-08,18;CL:0000084,3.00e-07,25;CL:0000827,3.00e-07,25;CL:0000624,7.18e-07,6 | |||
|ontology_enrichment_development_v019=CL:0000790;9.39e-08;18 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.79e-14!115;UBERON:0005743!5.59e-13!86;UBERON:0001017!7.63e-13!82;UBERON:0000073!4.15e-12!94;UBERON:0001016!4.15e-12!94;UBERON:0001049!9.24e-12!57;UBERON:0005068!9.24e-12!57;UBERON:0006241!9.24e-12!57;UBERON:0007135!9.24e-12!57;UBERON:0000955!1.90e-10!69;UBERON:0006238!1.90e-10!69;UBERON:0004121!1.03e-09!169;UBERON:0002616!1.46e-09!59;UBERON:0000924!1.69e-09!173;UBERON:0006601!1.69e-09!173;UBERON:0002780!1.22e-08!41;UBERON:0001890!1.22e-08!41;UBERON:0006240!1.22e-08!41;UBERON:0000153!3.22e-08!129;UBERON:0007811!3.22e-08!129;UBERON:0003080!5.23e-08!42;UBERON:0003075!1.44e-07!86;UBERON:0007284!1.44e-07!86;UBERON:0001893!2.55e-07!34;UBERON:0002346!3.01e-07!90;UBERON:0002020!3.82e-07!34;UBERON:0003528!3.82e-07!34;UBERON:0000033!3.83e-07!123;UBERON:0001869!5.01e-07!32;UBERON:0002791!6.12e-07!33;UBERON:0001950!8.72e-07!20 | |ontology_enrichment_uberon=UBERON:0007023!2.79e-14!115;UBERON:0005743!5.59e-13!86;UBERON:0001017!7.63e-13!82;UBERON:0000073!4.15e-12!94;UBERON:0001016!4.15e-12!94;UBERON:0001049!9.24e-12!57;UBERON:0005068!9.24e-12!57;UBERON:0006241!9.24e-12!57;UBERON:0007135!9.24e-12!57;UBERON:0000955!1.90e-10!69;UBERON:0006238!1.90e-10!69;UBERON:0004121!1.03e-09!169;UBERON:0002616!1.46e-09!59;UBERON:0000924!1.69e-09!173;UBERON:0006601!1.69e-09!173;UBERON:0002780!1.22e-08!41;UBERON:0001890!1.22e-08!41;UBERON:0006240!1.22e-08!41;UBERON:0000153!3.22e-08!129;UBERON:0007811!3.22e-08!129;UBERON:0003080!5.23e-08!42;UBERON:0003075!1.44e-07!86;UBERON:0007284!1.44e-07!86;UBERON:0001893!2.55e-07!34;UBERON:0002346!3.01e-07!90;UBERON:0002020!3.82e-07!34;UBERON:0003528!3.82e-07!34;UBERON:0000033!3.83e-07!123;UBERON:0001869!5.01e-07!32;UBERON:0002791!6.12e-07!33;UBERON:0001950!8.72e-07!20 | ||
|ontology_enrichment_uberon_v019=UBERON:0002780;7.08e-07;41!UBERON:0001890;7.08e-07;41!UBERON:0000073;9.34e-07;53!UBERON:0002616;9.34e-07;53 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.04e-14,114;UBERON:0001049,9.74e-14,56;UBERON:0005068,9.74e-14,56;UBERON:0006241,9.74e-14,56;UBERON:0007135,9.74e-14,56;UBERON:0001017,2.08e-13,81;UBERON:0000073,5.71e-13,53;UBERON:0002616,5.71e-13,53;UBERON:0001016,1.31e-12,89;UBERON:0000955,3.13e-11,68;UBERON:0006238,3.13e-11,68;UBERON:0003075,1.98e-10,82;UBERON:0007284,1.98e-10,82;UBERON:0004121,4.18e-10,171;UBERON:0000924,4.18e-10,171;UBERON:0006601,4.18e-10,171;UBERON:0002780,4.83e-10,41;UBERON:0001890,4.83e-10,41;UBERON:0003080,4.83e-10,41;UBERON:0006240,4.83e-10,41;UBERON:0010371,8.47e-10,104;UBERON:0002346,2.04e-09,86;UBERON:0003056,1.10e-08,61;UBERON:0001893,6.61e-08,34;UBERON:0001869,8.06e-08,32;UBERON:0002619,2.48e-07,22;UBERON:0001950,3.01e-07,20;UBERON:0003528,5.32e-07,34;UBERON:0002020,5.32e-07,34;UBERON:0002791,7.34e-07,32;UBERON:0000956,7.88e-07,25;UBERON:0000203,7.88e-07,25 | |||
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| ||
|short_description=p9@WDR1 | |short_description=p9@WDR1 | ||
}} | }} |
Latest revision as of 02:42, 20 September 2015
Short description: | p9@WDR1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_WDR1_5end |
Coexpression cluster: | NA |
Association with transcript: | -17bp_to_ENST00000382451, ENST00000382452, NM_005112, NM_017491, uc003gmf.2, uc003gmg.2_5end |
EntrezGene: | WDR1 |
HGNC: | 12754 |
UniProt: | O75083 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 3.33e-08 | 18 |
alpha-beta T cell | 3.33e-08 | 18 |
immature T cell | 3.33e-08 | 18 |
mature T cell | 3.33e-08 | 18 |
immature alpha-beta T cell | 3.33e-08 | 18 |
T cell | 3.00e-07 | 25 |
pro-T cell | 3.00e-07 | 25 |
CD4-positive, alpha-beta T cell | 7.18e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
adult organism | 1.04e-14 | 114 |
neural tube | 9.74e-14 | 56 |
neural rod | 9.74e-14 | 56 |
future spinal cord | 9.74e-14 | 56 |
neural keel | 9.74e-14 | 56 |
central nervous system | 2.08e-13 | 81 |
regional part of nervous system | 5.71e-13 | 53 |
regional part of brain | 5.71e-13 | 53 |
nervous system | 1.31e-12 | 89 |
brain | 3.13e-11 | 68 |
future brain | 3.13e-11 | 68 |
neural plate | 1.98e-10 | 82 |
presumptive neural plate | 1.98e-10 | 82 |
ectoderm-derived structure | 4.18e-10 | 171 |
ectoderm | 4.18e-10 | 171 |
presumptive ectoderm | 4.18e-10 | 171 |
regional part of forebrain | 4.83e-10 | 41 |
forebrain | 4.83e-10 | 41 |
anterior neural tube | 4.83e-10 | 41 |
future forebrain | 4.83e-10 | 41 |
ecto-epithelium | 8.47e-10 | 104 |
neurectoderm | 2.04e-09 | 86 |
pre-chordal neural plate | 1.10e-08 | 61 |
telencephalon | 6.61e-08 | 34 |
cerebral hemisphere | 8.06e-08 | 32 |
regional part of cerebral cortex | 2.48e-07 | 22 |
neocortex | 3.01e-07 | 20 |
brain grey matter | 5.32e-07 | 34 |
gray matter | 5.32e-07 | 34 |
regional part of telencephalon | 7.34e-07 | 32 |
cerebral cortex | 7.88e-07 | 25 |
pallium | 7.88e-07 | 25 |