FFCP PHASE1:Hg19::chr8:95683679..95683696,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr8:95683679..95683696,+ | |||
|description=CAGE_peak_at_chr8:95683679..95683696,+ | |description=CAGE_peak_at_chr8:95683679..95683696,+ | ||
|id=chr8:95683679..95683696,+ | |id=chr8:95683679..95683696,+ | ||
|ontology_enrichment_celltype=CL:0002322!7.04e-15!5;CL:0002231!4.49e-11!3;CL:0002076!7.77e-11!43;CL:0000066!2.00e-08!254;CL:0000223!3.53e-08!59;CL:0000240!1.11e-07!6;CL:0000311!1.11e-07!6;CL:0000079!1.11e-07!6;CL:0000237!1.11e-07!6;CL:0000036!1.11e-07!6;CL:0000357!1.11e-07!6;CL:0000114!1.11e-07!6 | |ontology_enrichment_celltype=CL:0002322!7.04e-15!5;CL:0002231!4.49e-11!3;CL:0002076!7.77e-11!43;CL:0000066!2.00e-08!254;CL:0000223!3.53e-08!59;CL:0000240!1.11e-07!6;CL:0000311!1.11e-07!6;CL:0000079!1.11e-07!6;CL:0000237!1.11e-07!6;CL:0000036!1.11e-07!6;CL:0000357!1.11e-07!6;CL:0000114!1.11e-07!6 | ||
|ontology_enrichment_celltype_v019=CL:0002231;7.79e-88;3!CL:0000039;9.43e-11;7!CL:0000586;9.43e-11;7!CL:0002076;4.38e-07;42 | |||
|ontology_enrichment_celltype_v019_2=CL:0002231,6.24e-88,3;CL:0000039,9.89e-11,7;CL:0000586,9.89e-11,7;CL:0002076,2.04e-07,42 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000161!6.44e-14!35;UBERON:0004119!6.79e-11!169;UBERON:0000925!6.79e-11!169;UBERON:0006595!6.79e-11!169;UBERON:0001004!3.54e-08!72;UBERON:0000344!3.77e-08!12;UBERON:0000166!4.50e-08!21;UBERON:0005156!4.99e-08!59;UBERON:0000990!4.99e-08!59;UBERON:0000162!2.23e-07!14;UBERON:0001353!2.23e-07!14;UBERON:0000163!2.23e-07!14;UBERON:0006866!2.23e-07!14;UBERON:0000164!2.23e-07!14;UBERON:0000931!2.23e-07!14;UBERON:0003124!2.71e-07!7;UBERON:0001007!3.28e-07!155;UBERON:0001555!3.28e-07!155;UBERON:0007026!3.28e-07!155;UBERON:0000165!3.92e-07!28;UBERON:0000930!3.92e-07!28;UBERON:0002367!5.16e-07!11;UBERON:0010147!5.16e-07!11;UBERON:0009846!5.16e-07!11;UBERON:0003353!5.16e-07!11;UBERON:0004902!5.16e-07!11;UBERON:0003820!5.16e-07!11;UBERON:0009847!5.16e-07!11;UBERON:0004122!7.73e-07!15 | |ontology_enrichment_uberon=UBERON:0000161!6.44e-14!35;UBERON:0004119!6.79e-11!169;UBERON:0000925!6.79e-11!169;UBERON:0006595!6.79e-11!169;UBERON:0001004!3.54e-08!72;UBERON:0000344!3.77e-08!12;UBERON:0000166!4.50e-08!21;UBERON:0005156!4.99e-08!59;UBERON:0000990!4.99e-08!59;UBERON:0000162!2.23e-07!14;UBERON:0001353!2.23e-07!14;UBERON:0000163!2.23e-07!14;UBERON:0006866!2.23e-07!14;UBERON:0000164!2.23e-07!14;UBERON:0000931!2.23e-07!14;UBERON:0003124!2.71e-07!7;UBERON:0001007!3.28e-07!155;UBERON:0001555!3.28e-07!155;UBERON:0007026!3.28e-07!155;UBERON:0000165!3.92e-07!28;UBERON:0000930!3.92e-07!28;UBERON:0002367!5.16e-07!11;UBERON:0010147!5.16e-07!11;UBERON:0009846!5.16e-07!11;UBERON:0003353!5.16e-07!11;UBERON:0004902!5.16e-07!11;UBERON:0003820!5.16e-07!11;UBERON:0009847!5.16e-07!11;UBERON:0004122!7.73e-07!15 | ||
|ontology_enrichment_uberon_v019=UBERON:0002367;5.16e-25;11!UBERON:0010147;5.16e-25;11!UBERON:0003937;4.86e-23;12!UBERON:0005399;4.86e-23;12!UBERON:0003101;3.89e-13;22!UBERON:0000079;3.89e-13;22!UBERON:0000077;6.40e-11;27 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002367,4.86e-25,11;UBERON:0010147,4.86e-25,11;UBERON:0009846,4.86e-25,11;UBERON:0003353,4.86e-25,11;UBERON:0004902,4.86e-25,11;UBERON:0003820,4.86e-25,11;UBERON:0009847,4.86e-25,11;UBERON:0003937,4.59e-23,12;UBERON:0005399,4.59e-23,12;UBERON:0000162,5.89e-20,14;UBERON:0001353,5.89e-20,14;UBERON:0000163,5.89e-20,14;UBERON:0006866,5.89e-20,14;UBERON:0000164,5.89e-20,14;UBERON:0000931,5.89e-20,14;UBERON:0004122,1.04e-18,15;UBERON:0001046,4.91e-15,19;UBERON:0003101,3.77e-13,22;UBERON:0000079,3.77e-13,22;UBERON:0003064,1.40e-10,28;UBERON:0000077,2.96e-10,29;UBERON:0000161,1.78e-08,36;UBERON:0005153,2.82e-08,37;UBERON:0006554,9.72e-07,47;UBERON:0005157,9.72e-07,47 | |||
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| ||
|short_description=p@chr8:95683679..95683696,+ | |short_description=p@chr8:95683679..95683696,+ | ||
}} | }} |
Latest revision as of 20:40, 31 July 2015
Short description: | p@chr8:95683679..95683696, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr8:95683679..95683696, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of prostate | 6.24e-88 | 3 |
germ line cell | 9.89e-11 | 7 |
germ cell | 9.89e-11 | 7 |
endo-epithelial cell | 2.04e-07 | 42 |
Ontology term | p-value | n |
---|---|---|
prostate gland | 4.86e-25 | 11 |
male accessory sex gland | 4.86e-25 | 11 |
embryonic cloacal epithelium | 4.86e-25 | 11 |
epithelium of hindgut | 4.86e-25 | 11 |
urogenital sinus epithelium | 4.86e-25 | 11 |
prostate bud | 4.86e-25 | 11 |
prostate field | 4.86e-25 | 11 |
sex gland | 4.59e-23 | 12 |
male reproductive gland | 4.59e-23 | 12 |
cloaca | 5.89e-20 | 14 |
anal region | 5.89e-20 | 14 |
embryonic cloaca | 5.89e-20 | 14 |
terminal part of digestive tract | 5.89e-20 | 14 |
primitive urogenital sinus | 5.89e-20 | 14 |
proctodeum | 5.89e-20 | 14 |
genitourinary system | 1.04e-18 | 15 |
hindgut | 4.91e-15 | 19 |
male organism | 3.77e-13 | 22 |
male reproductive system | 3.77e-13 | 22 |
intermediate mesoderm | 1.40e-10 | 28 |
mixed endoderm/mesoderm-derived structure | 2.96e-10 | 29 |
orifice | 1.78e-08 | 36 |
epithelial bud | 2.82e-08 | 37 |
urinary system structure | 9.72e-07 | 47 |
epithelial fold | 9.72e-07 | 47 |