FFCP PHASE1:Hg19::chr9:33001567..33001644,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=54840 | |EntrezGene=54840 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15984 | |HGNC=15984 | ||
|TSSclassifier=strong | |||
|UniProt=Q5T782,F8W6G5,Q6JV85,Q7Z2E3,E7EUY4,C9JZ40,C9J8U3,E7EVB7,F8WBD6 | |UniProt=Q5T782,F8W6G5,Q6JV85,Q7Z2E3,E7EUY4,C9JZ40,C9J8U3,E7EVB7,F8WBD6 | ||
|association_with_transcript=0bp_to_ENST00000309615,ENST00000344355,ENST00000379812,ENST00000379813,ENST00000379819,ENST00000379825,ENST00000397172,ENST00000464632,ENST00000473221,ENST00000476858,ENST00000477119,ENST00000478279,ENST00000480031,ENST00000494973,NM_001195248,NM_001195249,NM_001195250,NM_001195251,NM_001195252,NM_001195254,NM_175069,NM_175073,NR_036576,NR_036577,NR_036578,NR_036579,uc003zrs.2,uc003zrt.2,uc003zru.2,uc003zrv.2,uc003zrw.2,uc003zrx.2,uc003zry.2,uc003zsb.1,uc003zsc.1_5end | |association_with_transcript=0bp_to_ENST00000309615,ENST00000344355,ENST00000379812,ENST00000379813,ENST00000379819,ENST00000379825,ENST00000397172,ENST00000464632,ENST00000473221,ENST00000476858,ENST00000477119,ENST00000478279,ENST00000480031,ENST00000494973,NM_001195248,NM_001195249,NM_001195250,NM_001195251,NM_001195252,NM_001195254,NM_175069,NM_175073,NR_036576,NR_036577,NR_036578,NR_036579,uc003zrs.2,uc003zrt.2,uc003zru.2,uc003zrv.2,uc003zrw.2,uc003zrx.2,uc003zry.2,uc003zsb.1,uc003zsc.1_5end | ||
|cluster_id=chr9:33001567..33001644,- | |||
|description=CAGE_peak_1_at_APTX_5end | |description=CAGE_peak_1_at_APTX_5end | ||
|id=chr9:33001567..33001644,- | |id=chr9:33001567..33001644,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!9.45e-11!82;UBERON:0001049!5.25e-10!57;UBERON:0005068!5.25e-10!57;UBERON:0006241!5.25e-10!57;UBERON:0007135!5.25e-10!57;UBERON:0005743!6.14e-10!86;UBERON:0002780!7.04e-10!41;UBERON:0001890!7.04e-10!41;UBERON:0006240!7.04e-10!41;UBERON:0000073!7.59e-10!94;UBERON:0001016!7.59e-10!94;UBERON:0002020!2.23e-09!34;UBERON:0003528!2.23e-09!34;UBERON:0001893!3.21e-09!34;UBERON:0003080!4.01e-09!42;UBERON:0002791!4.03e-09!33;UBERON:0001869!1.19e-08!32;UBERON:0000955!5.75e-08!69;UBERON:0006238!5.75e-08!69;UBERON:0002616!1.38e-07!59;UBERON:0001737!3.43e-07!9;UBERON:0001950!9.72e-07!20 | |ontology_enrichment_uberon=UBERON:0001017!9.45e-11!82;UBERON:0001049!5.25e-10!57;UBERON:0005068!5.25e-10!57;UBERON:0006241!5.25e-10!57;UBERON:0007135!5.25e-10!57;UBERON:0005743!6.14e-10!86;UBERON:0002780!7.04e-10!41;UBERON:0001890!7.04e-10!41;UBERON:0006240!7.04e-10!41;UBERON:0000073!7.59e-10!94;UBERON:0001016!7.59e-10!94;UBERON:0002020!2.23e-09!34;UBERON:0003528!2.23e-09!34;UBERON:0001893!3.21e-09!34;UBERON:0003080!4.01e-09!42;UBERON:0002791!4.03e-09!33;UBERON:0001869!1.19e-08!32;UBERON:0000955!5.75e-08!69;UBERON:0006238!5.75e-08!69;UBERON:0002616!1.38e-07!59;UBERON:0001737!3.43e-07!9;UBERON:0001950!9.72e-07!20 | ||
|ontology_enrichment_uberon_v019=UBERON:0003528;2.16e-08;34!UBERON:0002020;2.16e-08;34!UBERON:0001893;2.44e-08;34!UBERON:0001869;5.05e-08;32!UBERON:0002791;5.14e-08;32!UBERON:0002780;2.49e-07;41!UBERON:0001890;2.49e-07;41!UBERON:0001737;3.06e-07;9!UBERON:0001557;3.06e-07;9!UBERON:0001950;8.00e-07;20!UBERON:0002619;9.32e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.58e-11,81;UBERON:0001016,4.04e-11,89;UBERON:0001049,1.12e-10,56;UBERON:0005068,1.12e-10,56;UBERON:0006241,1.12e-10,56;UBERON:0007135,1.12e-10,56;UBERON:0002780,7.04e-10,41;UBERON:0001890,7.04e-10,41;UBERON:0003080,7.04e-10,41;UBERON:0006240,7.04e-10,41;UBERON:0000073,1.11e-09,53;UBERON:0002616,1.11e-09,53;UBERON:0003528,2.23e-09,34;UBERON:0002020,2.23e-09,34;UBERON:0001893,3.21e-09,34;UBERON:0002791,1.04e-08,32;UBERON:0001869,1.19e-08,32;UBERON:0000955,1.79e-08,68;UBERON:0006238,1.79e-08,68;UBERON:0001737,3.43e-07,9;UBERON:0010371,6.49e-07,104;UBERON:0001950,9.72e-07,20 | |||
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| ||
|short_description=p1@APTX | |short_description=p1@APTX | ||
}} | }} |
Latest revision as of 02:53, 17 September 2015
Short description: | p1@APTX |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_APTX_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000309615, ENST00000344355, ENST00000379812, ENST00000379813, ENST00000379819, ENST00000379825, ENST00000397172, ENST00000464632, ENST00000473221, ENST00000476858, ENST00000477119, ENST00000478279, ENST00000480031, ENST00000494973, NM_001195248, NM_001195249, NM_001195250, NM_001195251, NM_001195252, NM_001195254, NM_175069, NM_175073, NR_036576, NR_036577, NR_036578, NR_036579, uc003zrs.2, uc003zrt.2, uc003zru.2, uc003zrv.2, uc003zrw.2, uc003zrx.2, uc003zry.2, uc003zsb.1, uc003zsc.1_5end |
EntrezGene: | APTX |
HGNC: | 15984 |
UniProt: | Q5T782F8W6G5Q6JV85Q7Z2E3E7EUY4C9JZ40C9J8U3E7EVB7F8WBD6 |
Genome view: | ZENBU |
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CAGE Expression
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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
central nervous system | 2.58e-11 | 81 |
nervous system | 4.04e-11 | 89 |
neural tube | 1.12e-10 | 56 |
neural rod | 1.12e-10 | 56 |
future spinal cord | 1.12e-10 | 56 |
neural keel | 1.12e-10 | 56 |
regional part of forebrain | 7.04e-10 | 41 |
forebrain | 7.04e-10 | 41 |
anterior neural tube | 7.04e-10 | 41 |
future forebrain | 7.04e-10 | 41 |
regional part of nervous system | 1.11e-09 | 53 |
regional part of brain | 1.11e-09 | 53 |
brain grey matter | 2.23e-09 | 34 |
gray matter | 2.23e-09 | 34 |
telencephalon | 3.21e-09 | 34 |
regional part of telencephalon | 1.04e-08 | 32 |
cerebral hemisphere | 1.19e-08 | 32 |
brain | 1.79e-08 | 68 |
future brain | 1.79e-08 | 68 |
larynx | 3.43e-07 | 9 |
ecto-epithelium | 6.49e-07 | 104 |
neocortex | 9.72e-07 | 20 |