FFCP PHASE1:Hg19::chr5:146890197..146890224,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr5:146890197..146890224,- | |||
|coexpression_cluster_id=C42 | |||
|description=CAGE_peak_at_chr5:146890197..146890224,- | |description=CAGE_peak_at_chr5:146890197..146890224,- | ||
|id=chr5:146890197..146890224,- | |id=chr5:146890197..146890224,- | ||
|ontology_enrichment_celltype=CL:0002319!4.21e-09!25;CL:0002591!3.52e-07!1;CL:0000133!4.36e-07!59;CL:0000095!4.85e-07!17;CL:0000123!4.85e-07!17 | |ontology_enrichment_celltype=CL:0002319!4.21e-09!25;CL:0002591!3.52e-07!1;CL:0000133!4.36e-07!59;CL:0000095!4.85e-07!17;CL:0000123!4.85e-07!17 | ||
|ontology_enrichment_celltype_v019=CL:0002591;5.12e-50;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002591,6.58e-50,1 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:0050619!6.24e-07!1;DOID:1357!6.24e-07!1 | |ontology_enrichment_disease=DOID:0050619!6.24e-07!1;DOID:1357!6.24e-07!1 | ||
|ontology_enrichment_disease_v019=DOID:5409;8.82e-14;4!DOID:4362;2.94e-11;5!DOID:1325;1.89e-08;7!DOID:3904;1.89e-08;7!DOID:3905;7.48e-07;9 | |||
|ontology_enrichment_disease_v019_2=DOID:5409,8.82e-14,4;DOID:4362,2.94e-11,5;DOID:1325,1.89e-08,7;DOID:3904,1.89e-08,7;DOID:3905,7.48e-07,9 | |||
|ontology_enrichment_uberon=UBERON:0002426!4.18e-07!1;UBERON:0003831!4.18e-07!1;UBERON:0003898!4.18e-07!1;UBERON:0004830!4.18e-07!1;UBERON:0001774!4.18e-07!1;UBERON:0003830!4.18e-07!1;UBERON:0005175!4.18e-07!1;UBERON:0003897!4.18e-07!1;UBERON:0001103!4.18e-07!1;UBERON:0010084!4.18e-07!1;UBERON:0001154!5.26e-07!1;UBERON:0001153!5.26e-07!1;UBERON:0001764!6.24e-07!1;UBERON:0001825!6.24e-07!1 | |ontology_enrichment_uberon=UBERON:0002426!4.18e-07!1;UBERON:0003831!4.18e-07!1;UBERON:0003898!4.18e-07!1;UBERON:0004830!4.18e-07!1;UBERON:0001774!4.18e-07!1;UBERON:0003830!4.18e-07!1;UBERON:0005175!4.18e-07!1;UBERON:0003897!4.18e-07!1;UBERON:0001103!4.18e-07!1;UBERON:0010084!4.18e-07!1;UBERON:0001154!5.26e-07!1;UBERON:0001153!5.26e-07!1;UBERON:0001764!6.24e-07!1;UBERON:0001825!6.24e-07!1 | ||
|ontology_enrichment_uberon_v019=UBERON:0000078;8.10e-26;2!UBERON:0002012;8.10e-26;2!UBERON:0008886;8.10e-26;2!UBERON:0000002;1.32e-09;6!UBERON:0001560;1.32e-09;6!UBERON:0001155;8.61e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000078,9.18e-26,2;UBERON:0007497,9.18e-26,2;UBERON:0003643,9.18e-26,2;UBERON:0003504,9.18e-26,2;UBERON:0003469,9.18e-26,2;UBERON:0003496,9.18e-26,2;UBERON:0002012,9.18e-26,2;UBERON:0008886,9.18e-26,2;UBERON:0007303,9.18e-26,2;UBERON:0002061,9.18e-26,2;UBERON:0005432,9.18e-26,2;UBERON:0004363,9.18e-26,2;UBERON:0004145,1.12e-17,3;UBERON:0003498,3.60e-11,5;UBERON:0005985,3.60e-11,5;UBERON:0000002,1.32e-09,6;UBERON:0001560,1.32e-09,6;UBERON:0010188,1.57e-09,6;UBERON:0002539,1.57e-09,6;UBERON:0003351,1.57e-09,6;UBERON:0008816,1.57e-09,6;UBERON:0004807,3.92e-08,28;UBERON:0001155,8.37e-07,9;UBERON:0000485,8.85e-07,9 | |||
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|short_description=p@chr5:146890197..146890224,- | |short_description=p@chr5:146890197..146890224,- | ||
}} | }} |
Latest revision as of 11:12, 30 July 2015
Short description: | p@chr5:146890197..146890224, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr5:146890197..146890224, - |
Coexpression cluster: | C42_small_lung_maxillary_pharyngeal_Mesenchymal_Wilms_colon |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of the pulmonary artery | 6.58e-50 | 1 |
Ontology term | p-value | n |
---|---|---|
mixed ectoderm/mesoderm/endoderm-derived structure | 9.18e-26 | 2 |
developing epithelial placode | 9.18e-26 | 2 |
respiratory system arterial blood vessel | 9.18e-26 | 2 |
respiratory system blood vessel | 9.18e-26 | 2 |
respiratory system artery | 9.18e-26 | 2 |
head blood vessel | 9.18e-26 | 2 |
pulmonary artery | 9.18e-26 | 2 |
pulmonary vascular system | 9.18e-26 | 2 |
pharyngeal vasculature | 9.18e-26 | 2 |
truncus arteriosus | 9.18e-26 | 2 |
aortic sac | 9.18e-26 | 2 |
pharyngeal arch artery | 9.18e-26 | 2 |
outflow tract | 1.12e-17 | 3 |
heart blood vessel | 3.60e-11 | 5 |
coronary vessel | 3.60e-11 | 5 |
uterine cervix | 1.32e-09 | 6 |
neck of organ | 1.32e-09 | 6 |
protuberance | 1.57e-09 | 6 |
pharyngeal arch | 1.57e-09 | 6 |
pharyngeal epithelium | 1.57e-09 | 6 |
embryonic head | 1.57e-09 | 6 |
respiratory system epithelium | 3.92e-08 | 28 |
colon | 8.37e-07 | 9 |
simple columnar epithelium | 8.85e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
lung small cell carcinoma | 8.82e-14 | 4 |
cervical cancer | 2.94e-11 | 5 |
bronchus cancer | 1.89e-08 | 7 |
bronchogenic carcinoma | 1.89e-08 | 7 |
lung carcinoma | 7.48e-07 | 9 |