FFCP PHASE1:Hg19::chr16:30596963..30596999,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr16:30596963..30596999,-
|short_description=p3@ZNF785
|description=CAGE_peak_3_at_ZNF785_5end
|association_with_transcript=10bp_to_uc002dyv.1,uc002dyw.1,uc010...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=146540 | |EntrezGene=146540 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26496 | |HGNC=26496 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=10bp_to_uc002dyv.1,uc002dyw.1,uc010vez.1_5end | |||
|cluster_id=chr16:30596963..30596999,- | |||
|description=CAGE_peak_3_at_ZNF785_5end | |||
|id=chr16:30596963..30596999,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.70e-19!57;UBERON:0005068!1.70e-19!57;UBERON:0006241!1.70e-19!57;UBERON:0007135!1.70e-19!57;UBERON:0007023!5.41e-19!115;UBERON:0001017!2.42e-17!82;UBERON:0000073!2.41e-16!94;UBERON:0001016!2.41e-16!94;UBERON:0005743!2.91e-16!86;UBERON:0003080!1.10e-15!42;UBERON:0002616!1.15e-15!59;UBERON:0002780!1.22e-15!41;UBERON:0001890!1.22e-15!41;UBERON:0006240!1.22e-15!41;UBERON:0000955!9.75e-14!69;UBERON:0006238!9.75e-14!69;UBERON:0002020!1.60e-12!34;UBERON:0003528!1.60e-12!34;UBERON:0001893!2.72e-12!34;UBERON:0002791!5.73e-12!33;UBERON:0001869!1.75e-11!32;UBERON:0002346!1.07e-10!90;UBERON:0003075!1.16e-10!86;UBERON:0007284!1.16e-10!86;UBERON:0001950!9.60e-10!20;UBERON:0000924!2.21e-09!173;UBERON:0006601!2.21e-09!173;UBERON:0004121!3.07e-09!169;UBERON:0000956!4.53e-09!25;UBERON:0000203!4.53e-09!25;UBERON:0002619!5.14e-09!22;UBERON:0003056!8.50e-09!61;UBERON:0000153!3.95e-08!129;UBERON:0007811!3.95e-08!129;UBERON:0000033!1.39e-07!123;UBERON:0000468!7.83e-07!659 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;5.08e-12;41!UBERON:0001890;5.08e-12;41!UBERON:0000073;6.53e-12;53!UBERON:0002616;6.53e-12;53!UBERON:0002791;2.49e-11;32!UBERON:0003528;4.01e-11;34!UBERON:0002020;4.01e-11;34!UBERON:0001869;7.70e-11;32!UBERON:0001893;8.35e-11;34!UBERON:0001950;6.56e-10;20!UBERON:0000956;1.17e-09;25!UBERON:0000203;1.17e-09;25!UBERON:0002619;1.70e-09;22!UBERON:0001017;2.35e-07;75!UBERON:0001016;3.89e-07;83!UBERON:0000955;4.89e-07;68 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,5.35e-22,56;UBERON:0005068,5.35e-22,56;UBERON:0006241,5.35e-22,56;UBERON:0007135,5.35e-22,56;UBERON:0000073,6.24e-21,53;UBERON:0002616,6.24e-21,53;UBERON:0001017,1.20e-19,81;UBERON:0001016,3.81e-19,89;UBERON:0007023,4.08e-19,114;UBERON:0002780,1.15e-17,41;UBERON:0001890,1.15e-17,41;UBERON:0003080,1.15e-17,41;UBERON:0006240,1.15e-17,41;UBERON:0000955,1.98e-15,68;UBERON:0006238,1.98e-15,68;UBERON:0003528,5.13e-14,34;UBERON:0002020,5.13e-14,34;UBERON:0001893,9.45e-14,34;UBERON:0002791,4.76e-13,32;UBERON:0001869,8.33e-13,32;UBERON:0002346,4.14e-12,86;UBERON:0003075,5.20e-12,82;UBERON:0007284,5.20e-12,82;UBERON:0001950,9.00e-11,20;UBERON:0000956,2.00e-10,25;UBERON:0000203,2.00e-10,25;UBERON:0002619,2.31e-10,22;UBERON:0004121,4.97e-10,171;UBERON:0000924,4.97e-10,171;UBERON:0006601,4.97e-10,171;UBERON:0010371,5.50e-10,104;UBERON:0003056,1.94e-09,61;UBERON:0011216,6.34e-09,223 | |||
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| ||
|short_description=p3@ZNF785 | |||
}} | }} |
Latest revision as of 08:13, 16 September 2015
Short description: | p3@ZNF785 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_ZNF785_5end |
Coexpression cluster: | NA |
Association with transcript: | 10bp_to_uc002dyv.1, uc002dyw.1, uc010vez.1_5end |
EntrezGene: | ZNF785 |
HGNC: | 26496 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural tube | 5.35e-22 | 56 |
neural rod | 5.35e-22 | 56 |
future spinal cord | 5.35e-22 | 56 |
neural keel | 5.35e-22 | 56 |
regional part of nervous system | 6.24e-21 | 53 |
regional part of brain | 6.24e-21 | 53 |
central nervous system | 1.20e-19 | 81 |
nervous system | 3.81e-19 | 89 |
adult organism | 4.08e-19 | 114 |
regional part of forebrain | 1.15e-17 | 41 |
forebrain | 1.15e-17 | 41 |
anterior neural tube | 1.15e-17 | 41 |
future forebrain | 1.15e-17 | 41 |
brain | 1.98e-15 | 68 |
future brain | 1.98e-15 | 68 |
brain grey matter | 5.13e-14 | 34 |
gray matter | 5.13e-14 | 34 |
telencephalon | 9.45e-14 | 34 |
regional part of telencephalon | 4.76e-13 | 32 |
cerebral hemisphere | 8.33e-13 | 32 |
neurectoderm | 4.14e-12 | 86 |
neural plate | 5.20e-12 | 82 |
presumptive neural plate | 5.20e-12 | 82 |
neocortex | 9.00e-11 | 20 |
cerebral cortex | 2.00e-10 | 25 |
pallium | 2.00e-10 | 25 |
regional part of cerebral cortex | 2.31e-10 | 22 |
ectoderm-derived structure | 4.97e-10 | 171 |
ectoderm | 4.97e-10 | 171 |
presumptive ectoderm | 4.97e-10 | 171 |
ecto-epithelium | 5.50e-10 | 104 |
pre-chordal neural plate | 1.94e-09 | 61 |
organ system subdivision | 6.34e-09 | 223 |