FFCP PHASE1:Hg19::chr16:31191456..31191463,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr16:31191456..31191463,+
|short_description=p1@FUS
|description=CAGE_peak_1_at_FUS_5end
|association_with_transcript=0bp_to_ENST00000380244,ENST00000394533_5e...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=2521 | |EntrezGene=2521 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4010 | |HGNC=4010 | ||
|TSSclassifier=strong | |||
|UniProt=A6NMX6,B4DR70 | |UniProt=A6NMX6,B4DR70 | ||
|association_with_transcript=0bp_to_ENST00000380244,ENST00000394533_5end | |||
|cluster_id=chr16:31191456..31191463,+ | |||
|description=CAGE_peak_1_at_FUS_5end | |||
|id=chr16:31191456..31191463,+ | |||
|ontology_enrichment_celltype=CL:0000012!1.00e-17!682;CL:0000548!1.46e-17!679;CL:0000004!1.46e-17!679;CL:0000255!1.46e-17!679;CL:0000003!5.82e-14!722;CL:0000144!9.98e-12!625;CL:0000219!2.16e-11!390;CL:0000988!1.69e-10!182;CL:0000037!1.85e-09!172;CL:0000566!1.85e-09!172;CL:0002032!3.60e-09!165;CL:0000837!3.60e-09!165;CL:0000034!3.93e-09!444;CL:0002057!5.20e-09!42;CL:0000860!5.63e-09!45;CL:0000763!1.02e-08!112;CL:0000049!1.02e-08!112;CL:0002371!2.44e-08!591;CL:0000063!2.84e-08!578;CL:0002319!6.98e-08!25;CL:0000723!8.81e-08!436;CL:0000048!1.51e-07!430;CL:0000134!3.33e-07!358 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.19e-12;33!CL:0002057;2.19e-12;33!CL:0000473;6.43e-08;39!CL:0000234;6.43e-08;39!CL:0002319;7.18e-08;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000219,5.48e-11,386;CL:0000988,1.45e-10,177;CL:0000037,1.01e-09,168;CL:0002032,1.94e-09,161;CL:0000837,1.94e-09,161;CL:0000763,4.38e-09,108;CL:0000049,4.38e-09,108;CL:0000860,5.20e-09,42;CL:0002057,5.20e-09,42;CL:0000034,1.38e-08,441;CL:0002319,6.98e-08,25;CL:0000723,2.74e-07,433;CL:0000048,4.60e-07,427;CL:0000473,5.01e-07,48;CL:0000234,5.01e-07,48;CL:0000134,6.77e-07,354 | |||
|ontology_enrichment_development_v019=CL:0002057;3.30e-07;42 | |||
|ontology_enrichment_disease=DOID:2531!1.49e-10!51;DOID:0060083!1.49e-10!51;DOID:162!1.01e-09!235;DOID:14566!2.96e-09!239;DOID:1240!1.67e-08!39;DOID:8692!3.02e-07!31 | |||
|ontology_enrichment_disease_v019=DOID:1240;4.74e-07;39!DOID:8692;5.29e-07;31 | |||
|ontology_enrichment_disease_v019_2=DOID:2531,1.49e-10,51;DOID:0060083,1.49e-10,51;DOID:162,1.01e-09,235;DOID:14566,2.96e-09,239;DOID:1240,1.67e-08,39;DOID:8692,3.02e-07,31 | |||
|ontology_enrichment_uberon=UBERON:0001737!7.64e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;7.62e-07;9!UBERON:0001557;7.62e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,7.64e-07,9 | |||
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| ||
|short_description=p1@FUS | |||
}} | }} |
Latest revision as of 11:33, 16 September 2015
Short description: | p1@FUS |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_FUS_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000380244, ENST00000394533_5end |
EntrezGene: | FUS |
HGNC: | 4010 |
UniProt: | A6NMX6B4DR70 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
motile cell | 5.48e-11 | 386 |
hematopoietic cell | 1.45e-10 | 177 |
hematopoietic stem cell | 1.01e-09 | 168 |
hematopoietic oligopotent progenitor cell | 1.94e-09 | 161 |
hematopoietic multipotent progenitor cell | 1.94e-09 | 161 |
myeloid cell | 4.38e-09 | 108 |
common myeloid progenitor | 4.38e-09 | 108 |
classical monocyte | 5.20e-09 | 42 |
CD14-positive, CD16-negative classical monocyte | 5.20e-09 | 42 |
stem cell | 1.38e-08 | 441 |
neural cell | 6.98e-08 | 25 |
somatic stem cell | 2.74e-07 | 433 |
multi fate stem cell | 4.60e-07 | 427 |
defensive cell | 5.01e-07 | 48 |
phagocyte | 5.01e-07 | 48 |
mesenchymal cell | 6.77e-07 | 354 |
Ontology term | p-value | n |
---|---|---|
larynx | 7.64e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 1.49e-10 | 51 |
immune system cancer | 1.49e-10 | 51 |
cancer | 1.01e-09 | 235 |
disease of cellular proliferation | 2.96e-09 | 239 |
leukemia | 1.67e-08 | 39 |
myeloid leukemia | 3.02e-07 | 31 |