FFCP PHASE1:Hg19::chr16:56782118..56782137,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr16:56782118..56782137,+
|short_description=p7@AB385278
|description=CAGE_peak_7_at_AB385278_5end
|association_with_transcript=-22bp_to_AB385278_5end
|Entrez...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-22bp_to_AB385278_5end | |||
|cluster_id=chr16:56782118..56782137,+ | |||
|description=CAGE_peak_7_at_AB385278_5end | |||
|id=chr16:56782118..56782137,+ | |||
|ontology_enrichment_celltype=CL:0002622!2.41e-07!3 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0009847;3.66e-23;3!UBERON:0003353;3.66e-23;3!UBERON:0007123;1.40e-14;5 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002619!3.33e-28!22;UBERON:0001950!5.89e-26!20;UBERON:0000956!1.17e-24!25;UBERON:0000203!1.17e-24!25;UBERON:0002020!2.28e-24!34;UBERON:0003528!2.28e-24!34;UBERON:0007023!1.50e-22!115;UBERON:0001869!2.25e-22!32;UBERON:0002791!1.24e-21!33;UBERON:0001893!6.21e-21!34;UBERON:0002780!9.49e-20!41;UBERON:0001890!9.49e-20!41;UBERON:0006240!9.49e-20!41;UBERON:0003080!3.22e-19!42;UBERON:0001049!7.25e-18!57;UBERON:0005068!7.25e-18!57;UBERON:0006241!7.25e-18!57;UBERON:0007135!7.25e-18!57;UBERON:0002616!3.77e-17!59;UBERON:0002771!5.71e-16!3;UBERON:0001871!5.99e-16!7;UBERON:0000955!7.24e-16!69;UBERON:0006238!7.24e-16!69;UBERON:0000200!2.03e-13!6;UBERON:0001017!8.02e-13!82;UBERON:0003056!2.16e-12!61;UBERON:0005743!4.55e-12!86;UBERON:0001876!1.82e-11!2;UBERON:0003075!9.95e-11!86;UBERON:0007284!9.95e-11!86;UBERON:0000073!1.33e-10!94;UBERON:0001016!1.33e-10!94;UBERON:0002346!4.18e-10!90;UBERON:0000349!6.23e-10!5;UBERON:0001872!6.74e-09!5;UBERON:0000153!6.93e-08!129;UBERON:0007811!6.93e-08!129;UBERON:0000991!1.32e-07!21;UBERON:0009196!1.32e-07!21;UBERON:0009117!1.32e-07!21;UBERON:0005564!1.32e-07!21;UBERON:0003101!1.95e-07!22;UBERON:0000079!1.95e-07!22;UBERON:0000033!2.04e-07!123;UBERON:0004176!3.10e-07!22 | |||
|ontology_enrichment_uberon_v019=UBERON:0001876;5.96e-34;2!UBERON:0002046;1.40e-14;5!UBERON:0000349;1.71e-14;5!UBERON:0001871;9.43e-11;6!UBERON:0002420;1.16e-08;9!UBERON:0007245;1.16e-08;9!UBERON:0010009;1.16e-08;9!UBERON:0010011;1.16e-08;9!UBERON:0000454;1.16e-08;9!UBERON:0002367;2.55e-07;11!UBERON:0010147;2.55e-07;11!UBERON:0003937;8.14e-07;12!UBERON:0005399;8.14e-07;12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001876,7.05e-34,2;UBERON:0002046,1.40e-14,5;UBERON:0004117,1.40e-14,5;UBERON:0007689,1.40e-14,5;UBERON:0007123,1.40e-14,5;UBERON:0003091,1.40e-14,5;UBERON:0000349,1.83e-14,5;UBERON:0001871,9.89e-11,6;UBERON:0002420,1.21e-08,9;UBERON:0007245,1.21e-08,9;UBERON:0010009,1.21e-08,9;UBERON:0010011,1.21e-08,9;UBERON:0000454,1.21e-08,9;UBERON:0009722,2.32e-07,11;UBERON:0007690,2.32e-07,11;UBERON:0002367,2.47e-07,11;UBERON:0010147,2.47e-07,11;UBERON:0009846,2.47e-07,11;UBERON:0003353,2.47e-07,11;UBERON:0004902,2.47e-07,11;UBERON:0003820,2.47e-07,11;UBERON:0009847,2.47e-07,11;UBERON:0003937,7.92e-07,12;UBERON:0005399,7.92e-07,12 | |||
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|short_description=p7@AB385278 | |||
}} | }} |
Latest revision as of 10:25, 25 July 2015
Short description: | p7@AB385278 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_AB385278_5end |
Coexpression cluster: | NA |
Association with transcript: | -22bp_to_AB385278_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
amygdala | 7.05e-34 | 2 |
thyroid gland | 1.40e-14 | 5 |
pharyngeal pouch | 1.40e-14 | 5 |
thyroid diverticulum | 1.40e-14 | 5 |
pharyngeal pouch 2 | 1.40e-14 | 5 |
thyroid primordium | 1.40e-14 | 5 |
limbic system | 1.83e-14 | 5 |
temporal lobe | 9.89e-11 | 6 |
basal ganglion | 1.21e-08 | 9 |
nuclear complex of neuraxis | 1.21e-08 | 9 |
aggregate regional part of brain | 1.21e-08 | 9 |
collection of basal ganglia | 1.21e-08 | 9 |
cerebral subcortex | 1.21e-08 | 9 |
entire pharyngeal arch endoderm | 2.32e-07 | 11 |
early pharyngeal endoderm | 2.32e-07 | 11 |
prostate gland | 2.47e-07 | 11 |
male accessory sex gland | 2.47e-07 | 11 |
embryonic cloacal epithelium | 2.47e-07 | 11 |
epithelium of hindgut | 2.47e-07 | 11 |
urogenital sinus epithelium | 2.47e-07 | 11 |
prostate bud | 2.47e-07 | 11 |
prostate field | 2.47e-07 | 11 |
sex gland | 7.92e-07 | 12 |
male reproductive gland | 7.92e-07 | 12 |