FFCP PHASE1:Hg19::chr7:134576283..134576309,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=800 | |EntrezGene=800 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1441 | |HGNC=1441 | ||
|TSSclassifier=strong | |||
|UniProt=E7EX44 | |UniProt=E7EX44 | ||
|association_with_transcript=-51bp_to_ENST00000424922,ENST00000495522_5end | |association_with_transcript=-51bp_to_ENST00000424922,ENST00000495522_5end | ||
|cluster_id=chr7:134576283..134576309,+ | |||
|coexpression_cluster_id=C2879 | |||
|description=CAGE_peak_9_at_CALD1_5end | |description=CAGE_peak_9_at_CALD1_5end | ||
|id=chr7:134576283..134576309,+ | |id=chr7:134576283..134576309,+ | ||
|ontology_enrichment_celltype=CL:0000055!6.27e-07!180 | |ontology_enrichment_celltype=CL:0000055!6.27e-07!180 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!6.67e-23!365;UBERON:0000481!6.70e-22!347;UBERON:0000468!1.47e-15!659;UBERON:0000467!2.23e-13!625;UBERON:0000119!2.88e-13!312;UBERON:0000480!4.09e-13!626;UBERON:0000483!6.24e-13!309;UBERON:0000062!6.82e-13!511;UBERON:0004119!9.26e-13!169;UBERON:0000925!9.26e-13!169;UBERON:0006595!9.26e-13!169;UBERON:0000922!1.81e-12!612;UBERON:0002050!4.53e-12!605;UBERON:0005423!4.53e-12!605;UBERON:0003104!8.63e-12!238;UBERON:0009142!8.63e-12!238;UBERON:0000923!9.06e-12!604;UBERON:0005291!9.06e-12!604;UBERON:0006598!9.06e-12!604;UBERON:0002532!9.06e-12!604;UBERON:0004121!3.11e-11!169;UBERON:0000924!5.54e-11!173;UBERON:0006601!5.54e-11!173;UBERON:0001007!7.35e-11!155;UBERON:0001555!7.35e-11!155;UBERON:0007026!7.35e-11!155;UBERON:0000477!7.75e-11!286;UBERON:0003102!2.81e-10!95;UBERON:0002100!9.18e-10!216;UBERON:0007023!1.61e-09!115;UBERON:0000033!3.67e-09!123;UBERON:0001048!6.12e-09!168;UBERON:0000064!6.50e-09!219;UBERON:0000077!9.55e-09!130;UBERON:0000153!1.09e-08!129;UBERON:0007811!1.09e-08!129;UBERON:0005256!1.84e-08!143;UBERON:0004921!4.26e-08!129;UBERON:0004185!4.26e-08!129;UBERON:0002530!1.53e-07!59;UBERON:0004111!2.58e-07!241;UBERON:0000161!3.11e-07!35 | |ontology_enrichment_uberon=UBERON:0000475!6.67e-23!365;UBERON:0000481!6.70e-22!347;UBERON:0000468!1.47e-15!659;UBERON:0000467!2.23e-13!625;UBERON:0000119!2.88e-13!312;UBERON:0000480!4.09e-13!626;UBERON:0000483!6.24e-13!309;UBERON:0000062!6.82e-13!511;UBERON:0004119!9.26e-13!169;UBERON:0000925!9.26e-13!169;UBERON:0006595!9.26e-13!169;UBERON:0000922!1.81e-12!612;UBERON:0002050!4.53e-12!605;UBERON:0005423!4.53e-12!605;UBERON:0003104!8.63e-12!238;UBERON:0009142!8.63e-12!238;UBERON:0000923!9.06e-12!604;UBERON:0005291!9.06e-12!604;UBERON:0006598!9.06e-12!604;UBERON:0002532!9.06e-12!604;UBERON:0004121!3.11e-11!169;UBERON:0000924!5.54e-11!173;UBERON:0006601!5.54e-11!173;UBERON:0001007!7.35e-11!155;UBERON:0001555!7.35e-11!155;UBERON:0007026!7.35e-11!155;UBERON:0000477!7.75e-11!286;UBERON:0003102!2.81e-10!95;UBERON:0002100!9.18e-10!216;UBERON:0007023!1.61e-09!115;UBERON:0000033!3.67e-09!123;UBERON:0001048!6.12e-09!168;UBERON:0000064!6.50e-09!219;UBERON:0000077!9.55e-09!130;UBERON:0000153!1.09e-08!129;UBERON:0007811!1.09e-08!129;UBERON:0005256!1.84e-08!143;UBERON:0004921!4.26e-08!129;UBERON:0004185!4.26e-08!129;UBERON:0002530!1.53e-07!59;UBERON:0004111!2.58e-07!241;UBERON:0000161!3.11e-07!35 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0011216,4.89e-13,223;UBERON:0004119,1.67e-11,160;UBERON:0000925,1.67e-11,160;UBERON:0006595,1.67e-11,160;UBERON:0003102,6.46e-11,99;UBERON:0000119,2.03e-10,309;UBERON:0000483,4.12e-10,306;UBERON:0007023,1.71e-09,114;UBERON:0001007,1.93e-09,145;UBERON:0001555,1.93e-09,145;UBERON:0007026,1.93e-09,145;UBERON:0004121,1.06e-08,171;UBERON:0000924,1.06e-08,171;UBERON:0006601,1.06e-08,171;UBERON:0000922,2.59e-08,592;UBERON:0002050,3.87e-08,564;UBERON:0005423,3.96e-08,581;UBERON:0001048,9.50e-08,160;UBERON:0002530,1.84e-07,59;UBERON:0010314,1.96e-07,132;UBERON:0003104,1.96e-07,160;UBERON:0009142,1.96e-07,160;UBERON:0000923,1.97e-07,560;UBERON:0010316,1.97e-07,560;UBERON:0005291,1.97e-07,560;UBERON:0006598,1.97e-07,560;UBERON:0010317,1.97e-07,560;UBERON:0002532,1.97e-07,560;UBERON:0004921,2.78e-07,118;UBERON:0005256,5.21e-07,122;UBERON:0000161,5.83e-07,36 | |||
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|phase1_expression=4.1786027232228,10.4909256706582,4.36958652697511,7.00513088471913,8.04529969969118,1.74467704820074,2.53299878168311,13.2661173419635,4.44015567939725,1.96587149201207,1.39560233594486,3.71350332621293,5.01157258634062,10.643906354564,9.61052389610956,0.672325146451775,1.20538905604795,2.19093027116212,0.487932798790507,0.984968464614303,1.22400414746552,0.626909442956176,1.14494394852423,1.64249310087461,0.502170558379211,0.382067028739756,0.0821005894499457,0,0,0,0.464448369948228,6.43594857135249,4.2168828628955,3.32778609150109,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.21079900526674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.31420598941885,2.01210257911091,1.66221330396589,2.89151321907653,2.00535164254356,5.5041677205113,3.9764297352555,1.94653948121054,2.17430079477356,0.886917589850256,1.84453049955565,2.88153966094968,1.09288586487763,2.22470665670658,0,0.174129737299267,0.132957960518865,0,0,0,0,1.72046919021225,0,0,0,0,0,0,1.42306505074684,0.33472061276467,0.805658634218294,0.760272105718513,1.22031028774085,0.735326160691737,0,0.982297011124877,0.898117490504679,2.25222960966644,0,0,0,0,0,1.74437620857014,0,1.13967460498122,1.58891016975863,3.44203944898576,4.61068896857864,1.12135520028461,0,0.98667019366864,11.5148083097914,3.50247747381189,4.08654757783647,6.50836938873205,5.76175924479999,6.32667865951251,12.1742429963825,5.13424639390004,18.3821877078715,11.0388428725139,8.25552016277471,8.00569598202816,19.8029546117246,5.28187564440602,37.8172359103302,0,1.7308685049499,9.10161361938026,3.59309070908119,8.75347792561144,7.88246675193374,22.719257469703,0.438977620880838,0.919463387397059,2.10333282469236,1.36118619792025,1.79389635688862,2.13557388818567,1.27159140695737,3.00091096084402,7.83199222212136,1.54584324027377,2.04728541964749,5.73839529620305,3.31285817548075,2.77677151668526,2.30124746605748,12.931684545505,0.710019185033229,1.30977727695932,1.52604533079439,10.2428252176547,6.2731607735892,12.6194021971162,1.34171076742555,1.45782745153634,1.51052125730374,2.48786532036889,1.00928340350251,0.72995471815166,0,0.643240938192885,0,7.89425477654364,9.38443326170461,7.57163520255001,7.24914167335837,5.54325368732009,6.17646247301406,7.40790109914181,5.45722423955522,8.08987848960986,6.08286541888573,10.7729203944989,0.738155454624648,1.40241773803446,2.057870056657,0,21.5483559197112,23.587853200263,21.859226547212,0,3.56666471775029,4.63233087806019,10.6457776846367,5.62008766288098,3.71957197923034,5.55530670951178,2.28065813717227,8.31947828223663,0,4.40535538905292,0.70445216541493,1.15493158208859,0.462985512576611,2.47330397904978,0,0,0,0,0,7.49870671894216,3.19166043577833,5.95455408418023,8.32894261136489,9.59091997096074,5.36735750831296,0,0,0.414656231081544,0.144119953416961,0.12624243342638,11.2391272897139,3.05590740446622,2.34434894420094,5.13217338068116,3.08482478109971,10.5120070245371,13.1480159010066,5.15802987988659,1.30788020649984,5.94040115149695,0.775630294546667,17.8828222925941,8.45302752556,0.26593811658487,0,2.82928111688356,0,2.66422179016099,6.43400971461664,4.34097284313154,3.29296134712308,8.14340460734338,6.04166312862328,7.12756685640086,6.02878754119172,1.74306691720059,3.89894665610022,0,0,0,0.239624855491583,0,17.1164286048862,7.96297186671686,14.5888189010772,11.8180235738331,0,0,0,0,10.1637849688985,1.30139853857622,0,1.34013012267479,0.637938751653163,0,0,0,9.44724486237377,3.50119364741774,7.05289061619313,0.831883446123229,0.535286966391485,0.157702415033935,1.63997980989798,0.902838299183157,4.5481500811197,1.03473071292505,0,1.10621501125022,14.683330845106,3.52442083432933,3.43143423810856,0,0,0,2.12189300012382,4.99306318531491,5.44302527993425,3.2254015016441,2.14846762603287,2.52594084989766,2.69092213436972,1.53512174720011,0.160853921143607,0,3.54682295746108,6.03709866064632,10.8407845938228,11.4235974420397,8.59956800603698,1.20859449591622,8.42127175273796,7.18231713699991,4.24813458209045,4.73437036817464,7.47409165268718,4.06079651616671,2.38747545023686,0,0,2.21658420675039,0,0.510281115829547,1.29549549661284,0,2.70946437543853,1.50506932156456,1.01950509218015,0,0.447749509444357,0,0,2.05160100093111,0.328014645699706,2.92840555197873,16.4865618636356,0,0,8.03971753194641,3.25030123018261,1.6068392984416,4.64019447802185,8.62672255842009,8.74970945938938,6.61615547925747,21.4840489736547,12.1814022887952,8.18175623194569,1.4245125703478,12.3963686520734,13.6454947829225,14.1650110868988,15.6794560326102,1.85938219718914,2.83331112147576,3.485186350803,1.54016790088044,1.06461206063404,0.869932992075073,0,0.715624433709956,8.93180086463202,0.632758849437452,0.38126038784765,0.767693373934002,11.1264136888819,3.18203247925937,0.78494864019923,7.3747707609159,7.96157386234559,6.59749453135844,0.202182481573316,1.58510321173008,0,1.46290121726877,3.65570234446927,0,5.18699663350346,7.35308246159306,4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| ||
|short_description=p9@CALD1 | |short_description=p9@CALD1 | ||
}} | }} |
Latest revision as of 11:50, 16 September 2015
Short description: | p9@CALD1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_CALD1_5end |
Coexpression cluster: | C2879_salivary_Fibroblast_vagina_liver_Hepatocyte_Skeletal_hepatoblastoma |
Association with transcript: | -51bp_to_ENST00000424922, ENST00000495522_5end |
EntrezGene: | CALD1 |
HGNC: | 1441 |
UniProt: | E7EX44 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
organ system subdivision | 4.89e-13 | 223 |
endoderm-derived structure | 1.67e-11 | 160 |
endoderm | 1.67e-11 | 160 |
presumptive endoderm | 1.67e-11 | 160 |
surface structure | 6.46e-11 | 99 |
cell layer | 2.03e-10 | 309 |
epithelium | 4.12e-10 | 306 |
adult organism | 1.71e-09 | 114 |
digestive system | 1.93e-09 | 145 |
digestive tract | 1.93e-09 | 145 |
primitive gut | 1.93e-09 | 145 |
ectoderm-derived structure | 1.06e-08 | 171 |
ectoderm | 1.06e-08 | 171 |
presumptive ectoderm | 1.06e-08 | 171 |
embryo | 2.59e-08 | 592 |
embryonic structure | 3.87e-08 | 564 |
developing anatomical structure | 3.96e-08 | 581 |
primordium | 9.50e-08 | 160 |
gland | 1.84e-07 | 59 |
structure with developmental contribution from neural crest | 1.96e-07 | 132 |
mesenchyme | 1.96e-07 | 160 |
entire embryonic mesenchyme | 1.96e-07 | 160 |
germ layer | 1.97e-07 | 560 |
germ layer / neural crest | 1.97e-07 | 560 |
embryonic tissue | 1.97e-07 | 560 |
presumptive structure | 1.97e-07 | 560 |
germ layer / neural crest derived structure | 1.97e-07 | 560 |
epiblast (generic) | 1.97e-07 | 560 |
subdivision of digestive tract | 2.78e-07 | 118 |
trunk mesenchyme | 5.21e-07 | 122 |
orifice | 5.83e-07 | 36 |