FFCP PHASE1:Hg19::chr9:16059821..16059828,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr9:16059821..16059828,+ | |||
|coexpression_cluster_id=C63 | |||
|description=CAGE_peak_at_chr9:16059821..16059828,+ | |description=CAGE_peak_at_chr9:16059821..16059828,+ | ||
|id=chr9:16059821..16059828,+ | |id=chr9:16059821..16059828,+ | ||
|ontology_enrichment_celltype=CL:0002591!3.27e-12!1;CL:0002566!1.81e-11!1 | |ontology_enrichment_celltype=CL:0002591!3.27e-12!1;CL:0002566!1.81e-11!1 | ||
|ontology_enrichment_celltype_v019=CL:0002591;3.34e-66;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002591,4.66e-66,1 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:171!1.50e-17!10;DOID:3095!4.56e-12!22;DOID:2994!4.56e-12!22 | |ontology_enrichment_disease=DOID:171!1.50e-17!10;DOID:3095!4.56e-12!22;DOID:2994!4.56e-12!22 | ||
|ontology_enrichment_disease_v019=DOID:171;2.22e-27;10!DOID:3095;3.89e-13;22!DOID:2994;3.89e-13;22 | |||
|ontology_enrichment_disease_v019_2=DOID:171,2.08e-27,10;DOID:3095,3.77e-13,22;DOID:2994,3.77e-13,22 | |||
|ontology_enrichment_uberon=UBERON:0007029!5.05e-12!1;UBERON:0006834!5.62e-12!1;UBERON:0007497!9.96e-07!2;UBERON:0003643!9.96e-07!2;UBERON:0003504!9.96e-07!2;UBERON:0003469!9.96e-07!2;UBERON:0003496!9.96e-07!2;UBERON:0004797!9.96e-07!2;UBERON:0002012!9.96e-07!2;UBERON:0008886!9.96e-07!2;UBERON:0007303!9.96e-07!2;UBERON:0002061!9.96e-07!2;UBERON:0005432!9.96e-07!2;UBERON:0004363!9.96e-07!2 | |ontology_enrichment_uberon=UBERON:0007029!5.05e-12!1;UBERON:0006834!5.62e-12!1;UBERON:0007497!9.96e-07!2;UBERON:0003643!9.96e-07!2;UBERON:0003504!9.96e-07!2;UBERON:0003469!9.96e-07!2;UBERON:0003496!9.96e-07!2;UBERON:0004797!9.96e-07!2;UBERON:0002012!9.96e-07!2;UBERON:0008886!9.96e-07!2;UBERON:0007303!9.96e-07!2;UBERON:0002061!9.96e-07!2;UBERON:0005432!9.96e-07!2;UBERON:0004363!9.96e-07!2 | ||
|ontology_enrichment_uberon_v019=UBERON:0002346;2.83e-66;4!UBERON:0000923;2.83e-66;4!UBERON:0010316;2.83e-66;4!UBERON:0005291;2.83e-66;4!UBERON:0002050;2.51e-53;5!UBERON:0005423;2.51e-53;5!UBERON:0000078;5.96e-34;2!UBERON:0002012;5.96e-34;2!UBERON:0008886;5.96e-34;2!UBERON:0010313;6.34e-08;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000078,7.05e-34,2;UBERON:0007497,7.05e-34,2;UBERON:0003643,7.05e-34,2;UBERON:0003504,7.05e-34,2;UBERON:0003469,7.05e-34,2;UBERON:0003496,7.05e-34,2;UBERON:0002012,7.05e-34,2;UBERON:0008886,7.05e-34,2;UBERON:0007303,7.05e-34,2;UBERON:0002061,7.05e-34,2;UBERON:0005432,7.05e-34,2;UBERON:0004363,7.05e-34,2;UBERON:0004145,4.09e-23,3;UBERON:0003498,1.83e-14,5;UBERON:0005985,1.83e-14,5;UBERON:0010188,2.74e-12,6;UBERON:0002539,2.74e-12,6;UBERON:0003351,2.74e-12,6;UBERON:0008816,2.74e-12,6;UBERON:0000485,1.21e-08,9;UBERON:0010313,6.56e-08,10;UBERON:0002342,6.56e-08,10;UBERON:0001042,6.56e-08,10;UBERON:0009145,6.56e-08,10;UBERON:0005062,6.56e-08,10;UBERON:0002346,7.10e-08,86;UBERON:0006562,2.63e-07,11;UBERON:0009722,2.63e-07,11;UBERON:0007690,2.63e-07,11 | |||
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|short_description=p@chr9:16059821..16059828,+ | |short_description=p@chr9:16059821..16059828,+ | ||
}} | }} |
Latest revision as of 00:54, 1 August 2015
Short description: | p@chr9:16059821..16059828, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr9:16059821..16059828, + |
Coexpression cluster: | C63_neuroectodermal_neuroblastoma_carcinoid_peripheral_chronic_neuroepithelioma_acute |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of the pulmonary artery | 4.66e-66 | 1 |
Ontology term | p-value | n |
---|---|---|
mixed ectoderm/mesoderm/endoderm-derived structure | 7.05e-34 | 2 |
developing epithelial placode | 7.05e-34 | 2 |
respiratory system arterial blood vessel | 7.05e-34 | 2 |
respiratory system blood vessel | 7.05e-34 | 2 |
respiratory system artery | 7.05e-34 | 2 |
head blood vessel | 7.05e-34 | 2 |
pulmonary artery | 7.05e-34 | 2 |
pulmonary vascular system | 7.05e-34 | 2 |
pharyngeal vasculature | 7.05e-34 | 2 |
truncus arteriosus | 7.05e-34 | 2 |
aortic sac | 7.05e-34 | 2 |
pharyngeal arch artery | 7.05e-34 | 2 |
outflow tract | 4.09e-23 | 3 |
heart blood vessel | 1.83e-14 | 5 |
coronary vessel | 1.83e-14 | 5 |
protuberance | 2.74e-12 | 6 |
pharyngeal arch | 2.74e-12 | 6 |
pharyngeal epithelium | 2.74e-12 | 6 |
embryonic head | 2.74e-12 | 6 |
simple columnar epithelium | 1.21e-08 | 9 |
neural crest-derived structure | 6.56e-08 | 10 |
neural crest | 6.56e-08 | 10 |
chordate pharynx | 6.56e-08 | 10 |
pharyngeal region of foregut | 6.56e-08 | 10 |
neural fold | 6.56e-08 | 10 |
neurectoderm | 7.10e-08 | 86 |
pharynx | 2.63e-07 | 11 |
entire pharyngeal arch endoderm | 2.63e-07 | 11 |
early pharyngeal endoderm | 2.63e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
neuroectodermal tumor | 2.08e-27 | 10 |
germ cell and embryonal cancer | 3.77e-13 | 22 |
germ cell cancer | 3.77e-13 | 22 |