FFCP PHASE1:Hg19::chrX:132549562..132549573,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2239 | |EntrezGene=2239 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4452 | |HGNC=4452 | ||
|TSSclassifier=strong | |||
|UniProt=O75487 | |UniProt=O75487 | ||
|association_with_transcript=-44bp_to_ENST00000370828_5end | |association_with_transcript=-44bp_to_ENST00000370828_5end | ||
|cluster_id=chrX:132549562..132549573,- | |||
|description=CAGE_peak_5_at_GPC4_5end | |description=CAGE_peak_5_at_GPC4_5end | ||
|id=chrX:132549562..132549573,- | |id=chrX:132549562..132549573,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000039;7.61e-10;7!CL:0000586;7.61e-10;7!CL:0002322;3.02e-08;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,4.26e-10,7;CL:0000586,4.26e-10,7;CL:0002322,3.26e-08,5;CL:0000066,5.81e-07,253 | |||
|ontology_enrichment_development_v019=UBERON:0009117;1.33e-09;10!UBERON:0005564;1.33e-09;10 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3095;7.27e-09;22!DOID:2994;7.27e-09;22 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,3.12e-09,22;DOID:2994,3.12e-09,22 | |||
|ontology_enrichment_uberon=UBERON:0000468!1.22e-08!659;UBERON:0000464!5.17e-08!104;UBERON:0002553!1.77e-07!70;UBERON:0000064!2.50e-07!219;UBERON:0000475!5.60e-07!365;UBERON:0004923!5.88e-07!57 | |ontology_enrichment_uberon=UBERON:0000468!1.22e-08!659;UBERON:0000464!5.17e-08!104;UBERON:0002553!1.77e-07!70;UBERON:0000064!2.50e-07!219;UBERON:0000475!5.60e-07!365;UBERON:0004923!5.88e-07!57 | ||
|ontology_enrichment_uberon_v019=UBERON:0006554;7.15e-08;30!UBERON:0001008;7.15e-08;30 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002553,1.93e-07,61;UBERON:0006554,5.10e-07,47;UBERON:0001008,9.45e-07,48 | |||
|phase1_expression=0.908391896352783,1.49870366723688,1.55049844505568,1.0007329835313,1.34088328328186,2.61701557230111,0,1.26343974685366,0.522371256399677,0.491467873003018,0.697801167972428,3.05817920982241,3.16520373874144,0,0,0,0,0,0,1.23121058076788,2.44800829493104,1.88072832886853,0.572471974262113,1.36874425072884,1.25542639594803,0.534893840235659,0.410502947249729,0.472264687882075,0,0,0,0,0.6024118375565,0.369754010166788,0,0,0,0.553995408531877,0.200544447470142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.639337125799041,0.329851300186716,0,0,0,0.56738522469114,0,0,0.521482918420201,0,0.605399502633369,0.368277635987565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.511450247374121,0,0,0.289693037921647,0.795285947051099,0,2.07976597760949,1.33037638477538,2.19586964232815,1.76821751921912,0.728590576585084,0,0.324547393654683,0,0.26591592103773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0.633152558322899,0.132409180813219,1.14734648299525,1.06400514659507,0,0,0.49333509683432,0.311211035399766,0,0,1.21085942115945,0.576175924479999,0.234321431833797,0.624320153660641,0,0.298897361103602,0.587172493218824,0.485618833104395,0.421352420106746,0.204154171254893,0.368502951935304,0.929932030581889,0,0.247266929278557,0,0.718618141816238,0.505008341862199,0.375355559615893,0,0.438977620880838,0,0.751190294532984,0,1.4351170855109,0.427114777637135,0.423863802319124,0,0.103052529238439,0.515281080091258,0.744467425326359,1.18143432568886,0.779496041289589,0.252433774244115,0.0920498986422993,0,2.4850671476163,0.403008392910561,0.169560592310488,0.57978255948989,0.545492241181669,0,8.66013313520127,9.012024245861,6.50686080069303,5.90868013587612,8.83122978064699,6.56959246336494,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2347220339942,1.47008711385542,0,0,0,0,0.122988438543114,1.20097467208968,0.878002283269004,1.1240175325762,0.201057944823262,1.75918045801206,0.325808305310325,0,1.44331342025273,1.27523445472584,6.22266079449855,0.288732895522148,0.462985512576611,0,1.58040879591855,0,0,1.8720341211139,1.0404181360211,0.93733833986777,0.671928512795438,0.708875486211932,0.268675568108545,0.290633938513962,0,0,0,0,0,0,0.126995788584338,0,0,0,0.102827492703324,0,0,1.34557301214433,1.74384027533312,0.4400297149257,0,0,0,0.797814349754612,0,0.257207374262142,0,0.266422179016099,0.142977993658148,0.542621605391443,0.823240336780769,0,0,0,0.301439377059586,0,0.199945982364114,0,0,0,0.479249710983165,0,5.70547620162874,0.144781306667579,0.410952645100767,0.895304816199478,0,0,0,0,0.254094624222463,0,0,0.167516265334349,0,0,0,0,0.24538298343828,0.500170521059677,0,0,0.178428988797162,0,0,0.300946099727719,0,2.0694614258501,0,0.368738337083406,0,0.195801157462741,1.02943027143257,0.206768026122887,0,0,1.21251028578504,1.66435439510497,4.83824469327489,1.24053903909388,2.91577749247319,1.40330047216537,1.53766979106841,1.02341449813341,1.60853921143608,0,0.462629081407967,0.532685175939381,0.0821271560138091,0,0.348631135379878,0,1.80455823272956,0,0,0,0.131124414959424,1.35359883872224,1.15523005656622,3.13739907670742,1.46139224653261,1.68882606228601,0,0,0.431831832204279,1.54227252690289,1.89662506280697,2.00675909541941,0.509752546090077,0,1.34324852833307,0,0,0.256450125116389,1.96808787419823,0.650756789328606,0.309123034943167,3.84591752237042,1.81520899825294,2.29706215198469,0.650060246036521,0,0.676695028044854,0.308097234229289,1.07452572308291,0.551346289938122,0.751941714077915,1.0151168573996,0.426133137080504,1.60257664164127,0.330569830721956,1.92190067365106,0.893288987462089,1.6185244936888,0,0,0,0.308033580176089,0,0,0,0.143124886741991,0.372158369359667,0,0,0.255897791311334,0.42793898803392,0.318203247925937,0,1.43897966066652,0,0.353437207037059,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202910376962704,0,0,0.286822704408103,0.196498082026242,0,0,0.211107635297664,0,0,0,0.288666338176536,1.34060455107157,0,0.376575203107117,1.72202149068492,6.73885902670502,2.21715076768338,1.83778720165568,0,0,0,0,0,0,0,0,1.1750647824022,0,0,0,0,0,0.956557636372934,0,0,0,0.973865820823666,0,0,0,0,0,0,0,3.83261613921294,0,1.22896305723383,0.671028323677248,0.834245708559542,0.976940477010201,0,2.46174797895425,0.270455678475983,0,7.04935025439248,0,1.02555725490326,0.849523652246594,0,0,0.95497793895076,0.890894042497916,0,0,0.422008249231538,0,0,6.5448876519678,0.796991953004279,1.38141957765574,0,1.84083628503879,0,0.311039587661807,1.16828856491525,0,0,0.986434056369336,0,3.33410970433911,0,0.463840490809256,0,1.04171104434093,0.699679999969566,0,0.910347586283997,2.03402920234213,1.18193840883968,0,0,0.173624994933292,0,0.120596438625408,0,0.110579259931225,0.295547618953547,0.219385397153973,0,0,1.92375646259493,0.455768223388005,9.68368398429853,3.68006342080066,1.84700532267414,2.87101043758728,1.00757352742049,2.13213910407454,0,0,0.332423363800313,0,0,0,0,0,2.3209787098083,1.14262965711403,0,10.17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| 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| ||
|short_description=p5@GPC4 | |short_description=p5@GPC4 | ||
}} | }} |
Latest revision as of 12:05, 19 September 2015
Short description: | p5@GPC4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_GPC4_5end |
Coexpression cluster: | NA |
Association with transcript: | -44bp_to_ENST00000370828_5end |
EntrezGene: | GPC4 |
HGNC: | 4452 |
UniProt: | O75487 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 4.26e-10 | 7 |
germ cell | 4.26e-10 | 7 |
embryonic stem cell | 3.26e-08 | 5 |
epithelial cell | 5.81e-07 | 253 |
Ontology term | p-value | n |
---|---|---|
anatomical cavity | 1.93e-07 | 61 |
urinary system structure | 5.10e-07 | 47 |
renal system | 9.45e-07 | 48 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 3.12e-09 | 22 |
germ cell cancer | 3.12e-09 | 22 |