FFCP PHASE1:Hg19::chrX:99665262..99665280,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=57526 | |EntrezGene=57526 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14270 | |HGNC=14270 | ||
|TSSclassifier=strong | |||
|UniProt=Q8TAB3,B3KU71,E9PAM6 | |UniProt=Q8TAB3,B3KU71,E9PAM6 | ||
|association_with_transcript=0bp_to_ENST00000255531,ENST00000373034,NM_001105243,NM_001184880,NM_020766,uc004efw.3,uc004efx.3,uc010nmz.2_5end | |association_with_transcript=0bp_to_ENST00000255531,ENST00000373034,NM_001105243,NM_001184880,NM_020766,uc004efw.3,uc004efx.3,uc010nmz.2_5end | ||
|cluster_id=chrX:99665262..99665280,- | |||
|description=CAGE_peak_1_at_PCDH19_5end | |description=CAGE_peak_1_at_PCDH19_5end | ||
|id=chrX:99665262..99665280,- | |id=chrX:99665262..99665280,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002321;1.65e-07;15 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;2.33e-11;82 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.74e-35!115;UBERON:0001017!5.27e-32!82;UBERON:0001049!1.26e-31!57;UBERON:0005068!1.26e-31!57;UBERON:0006241!1.26e-31!57;UBERON:0007135!1.26e-31!57;UBERON:0000073!3.52e-31!94;UBERON:0001016!3.52e-31!94;UBERON:0005743!4.20e-30!86;UBERON:0002616!6.84e-29!59;UBERON:0003080!1.21e-26!42;UBERON:0000955!2.61e-26!69;UBERON:0006238!2.61e-26!69;UBERON:0002780!4.63e-26!41;UBERON:0001890!4.63e-26!41;UBERON:0006240!4.63e-26!41;UBERON:0002346!1.35e-24!90;UBERON:0003075!3.16e-24!86;UBERON:0007284!3.16e-24!86;UBERON:0002020!8.71e-24!34;UBERON:0003528!8.71e-24!34;UBERON:0000924!9.71e-24!173;UBERON:0006601!9.71e-24!173;UBERON:0001893!1.14e-23!34;UBERON:0004121!3.55e-23!169;UBERON:0002791!5.37e-23!33;UBERON:0001869!6.52e-23!32;UBERON:0003056!4.69e-19!61;UBERON:0000956!7.74e-19!25;UBERON:0000203!7.74e-19!25;UBERON:0000153!5.07e-18!129;UBERON:0007811!5.07e-18!129;UBERON:0000033!1.19e-17!123;UBERON:0002619!1.94e-17!22;UBERON:0001950!5.35e-16!20;UBERON:0000468!1.36e-14!659;UBERON:0000475!5.31e-11!365;UBERON:0000922!3.47e-10!612;UBERON:0000467!4.22e-10!625;UBERON:0000480!6.28e-10!626;UBERON:0000119!2.11e-09!312;UBERON:0000483!3.46e-09!309;UBERON:0000025!4.81e-09!194;UBERON:0004111!5.75e-09!241;UBERON:0002050!2.44e-08!605;UBERON:0005423!2.44e-08!605;UBERON:0000923!4.35e-08!604;UBERON:0005291!4.35e-08!604;UBERON:0006598!4.35e-08!604;UBERON:0002532!4.35e-08!604;UBERON:0000064!5.45e-08!219;UBERON:0000477!8.46e-08!286;UBERON:0001871!6.33e-07!7 | |ontology_enrichment_uberon=UBERON:0007023!2.74e-35!115;UBERON:0001017!5.27e-32!82;UBERON:0001049!1.26e-31!57;UBERON:0005068!1.26e-31!57;UBERON:0006241!1.26e-31!57;UBERON:0007135!1.26e-31!57;UBERON:0000073!3.52e-31!94;UBERON:0001016!3.52e-31!94;UBERON:0005743!4.20e-30!86;UBERON:0002616!6.84e-29!59;UBERON:0003080!1.21e-26!42;UBERON:0000955!2.61e-26!69;UBERON:0006238!2.61e-26!69;UBERON:0002780!4.63e-26!41;UBERON:0001890!4.63e-26!41;UBERON:0006240!4.63e-26!41;UBERON:0002346!1.35e-24!90;UBERON:0003075!3.16e-24!86;UBERON:0007284!3.16e-24!86;UBERON:0002020!8.71e-24!34;UBERON:0003528!8.71e-24!34;UBERON:0000924!9.71e-24!173;UBERON:0006601!9.71e-24!173;UBERON:0001893!1.14e-23!34;UBERON:0004121!3.55e-23!169;UBERON:0002791!5.37e-23!33;UBERON:0001869!6.52e-23!32;UBERON:0003056!4.69e-19!61;UBERON:0000956!7.74e-19!25;UBERON:0000203!7.74e-19!25;UBERON:0000153!5.07e-18!129;UBERON:0007811!5.07e-18!129;UBERON:0000033!1.19e-17!123;UBERON:0002619!1.94e-17!22;UBERON:0001950!5.35e-16!20;UBERON:0000468!1.36e-14!659;UBERON:0000475!5.31e-11!365;UBERON:0000922!3.47e-10!612;UBERON:0000467!4.22e-10!625;UBERON:0000480!6.28e-10!626;UBERON:0000119!2.11e-09!312;UBERON:0000483!3.46e-09!309;UBERON:0000025!4.81e-09!194;UBERON:0004111!5.75e-09!241;UBERON:0002050!2.44e-08!605;UBERON:0005423!2.44e-08!605;UBERON:0000923!4.35e-08!604;UBERON:0005291!4.35e-08!604;UBERON:0006598!4.35e-08!604;UBERON:0002532!4.35e-08!604;UBERON:0000064!5.45e-08!219;UBERON:0000477!8.46e-08!286;UBERON:0001871!6.33e-07!7 | ||
|ontology_enrichment_uberon_v019=UBERON:0001869;1.58e-25;32!UBERON:0003528;3.16e-25;34!UBERON:0002020;3.16e-25;34!UBERON:0002791;4.42e-25;32!UBERON:0001893;4.68e-25;34!UBERON:0002780;4.42e-23;41!UBERON:0001890;4.42e-23;41!UBERON:0000956;5.57e-23;25!UBERON:0000203;5.57e-23;25!UBERON:0002619;3.07e-21;22!UBERON:0000073;3.94e-20;53!UBERON:0002616;3.94e-20;53!UBERON:0001950;1.87e-19;20!UBERON:0001017;7.77e-15;75!UBERON:0000955;2.77e-14;68!UBERON:0001016;2.37e-13;83!UBERON:0000922;4.17e-13;49!UBERON:0007023;1.19e-11;114!UBERON:0002420;7.53e-08;9!UBERON:0007245;7.53e-08;9!UBERON:0010009;7.53e-08;9!UBERON:0010011;7.53e-08;9!UBERON:0000454;7.53e-08;9!UBERON:0000125;1.28e-07;9!UBERON:0002308;1.28e-07;9!UBERON:0001871;2.14e-07;6!UBERON:0000200;9.58e-07;6 | |||
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| ||
|short_description=p1@PCDH19 | |short_description=p1@PCDH19 | ||
}} | }} |
Latest revision as of 15:48, 16 September 2015
Short description: | p1@PCDH19 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_PCDH19_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000255531, ENST00000373034, NM_001105243, NM_001184880, NM_020766, uc004efw.3, uc004efx.3, uc010nmz.2_5end |
EntrezGene: | PCDH19 |
HGNC: | 14270 |
UniProt: | Q8TAB3B3KU71E9PAM6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data