FFCP PHASE1:Hg19::chr17:38296753..38296803,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr17:38296753..38296803,+
|short_description=p1@CASC3
|description=CAGE_peak_1_at_CASC3_5end
|association_with_transcript=177bp_to_ENST00000394114_5end
|Entre...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=22794 | |EntrezGene=22794 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17040 | |HGNC=17040 | ||
|TSSclassifier=strong | |||
|UniProt=O15234 | |UniProt=O15234 | ||
|association_with_transcript=177bp_to_ENST00000394114_5end | |||
|cluster_id=chr17:38296753..38296803,+ | |||
|description=CAGE_peak_1_at_CASC3_5end | |||
|id=chr17:38296753..38296803,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.45e-21!115;UBERON:0001049!8.50e-16!57;UBERON:0005068!8.50e-16!57;UBERON:0006241!8.50e-16!57;UBERON:0007135!8.50e-16!57;UBERON:0000073!9.91e-14!94;UBERON:0001016!9.91e-14!94;UBERON:0001017!2.09e-13!82;UBERON:0003075!2.76e-13!86;UBERON:0007284!2.76e-13!86;UBERON:0002346!6.49e-13!90;UBERON:0002616!8.89e-13!59;UBERON:0000955!1.62e-12!69;UBERON:0006238!1.62e-12!69;UBERON:0005743!2.66e-12!86;UBERON:0002780!9.43e-12!41;UBERON:0001890!9.43e-12!41;UBERON:0006240!9.43e-12!41;UBERON:0003080!8.34e-11!42;UBERON:0000025!3.33e-09!194;UBERON:0001893!3.99e-09!34;UBERON:0002020!7.83e-09!34;UBERON:0003528!7.83e-09!34;UBERON:0002791!1.02e-08!33;UBERON:0003056!1.76e-08!61;UBERON:0001869!2.04e-08!32;UBERON:0002619!3.68e-07!22 | |||
|ontology_enrichment_uberon_v019=UBERON:0000073;2.00e-09;53!UBERON:0002616;2.00e-09;53!UBERON:0002780;1.57e-08;41!UBERON:0001890;1.57e-08;41!UBERON:0001893;4.16e-08;34!UBERON:0003528;1.44e-07;34!UBERON:0002020;1.44e-07;34!UBERON:0001869;1.61e-07;32!UBERON:0002791;2.28e-07;32!UBERON:0001017;2.93e-07;75!UBERON:0002619;4.21e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,8.18e-21,114;UBERON:0001049,8.20e-17,56;UBERON:0005068,8.20e-17,56;UBERON:0006241,8.20e-17,56;UBERON:0007135,8.20e-17,56;UBERON:0000073,3.13e-16,53;UBERON:0002616,3.13e-16,53;UBERON:0001016,1.40e-15,89;UBERON:0001017,3.90e-14,81;UBERON:0003075,1.56e-13,82;UBERON:0007284,1.56e-13,82;UBERON:0000955,2.77e-13,68;UBERON:0006238,2.77e-13,68;UBERON:0002346,3.95e-13,86;UBERON:0002780,9.43e-12,41;UBERON:0001890,9.43e-12,41;UBERON:0003080,9.43e-12,41;UBERON:0006240,9.43e-12,41;UBERON:0003056,1.34e-09,61;UBERON:0000025,1.87e-09,192;UBERON:0001893,3.99e-09,34;UBERON:0003528,7.83e-09,34;UBERON:0002020,7.83e-09,34;UBERON:0001869,2.04e-08,32;UBERON:0002791,3.28e-08,32;UBERON:0010371,6.08e-08,104;UBERON:0002619,3.68e-07,22 | |||
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|short_description=p1@CASC3 | |||
}} | }} |
Latest revision as of 00:13, 20 September 2015
Short description: | p1@CASC3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CASC3_5end |
Coexpression cluster: | NA |
Association with transcript: | 177bp_to_ENST00000394114_5end |
EntrezGene: | CASC3 |
HGNC: | 17040 |
UniProt: | O15234 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 8.18e-21 | 114 |
neural tube | 8.20e-17 | 56 |
neural rod | 8.20e-17 | 56 |
future spinal cord | 8.20e-17 | 56 |
neural keel | 8.20e-17 | 56 |
regional part of nervous system | 3.13e-16 | 53 |
regional part of brain | 3.13e-16 | 53 |
nervous system | 1.40e-15 | 89 |
central nervous system | 3.90e-14 | 81 |
neural plate | 1.56e-13 | 82 |
presumptive neural plate | 1.56e-13 | 82 |
brain | 2.77e-13 | 68 |
future brain | 2.77e-13 | 68 |
neurectoderm | 3.95e-13 | 86 |
regional part of forebrain | 9.43e-12 | 41 |
forebrain | 9.43e-12 | 41 |
anterior neural tube | 9.43e-12 | 41 |
future forebrain | 9.43e-12 | 41 |
pre-chordal neural plate | 1.34e-09 | 61 |
tube | 1.87e-09 | 192 |
telencephalon | 3.99e-09 | 34 |
brain grey matter | 7.83e-09 | 34 |
gray matter | 7.83e-09 | 34 |
cerebral hemisphere | 2.04e-08 | 32 |
regional part of telencephalon | 3.28e-08 | 32 |
ecto-epithelium | 6.08e-08 | 104 |
regional part of cerebral cortex | 3.68e-07 | 22 |