FFCP PHASE1:Hg19::chr10:18429658..18429670,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=783 | |EntrezGene=783 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1402 | |HGNC=1402 | ||
|TSSclassifier=strong | |||
|UniProt=A6PVM6 | |UniProt=A6PVM6 | ||
|association_with_transcript=0bp_to_ENST00000352115,ENST00000377328_5end | |association_with_transcript=0bp_to_ENST00000352115,ENST00000377328_5end | ||
|cluster_id=chr10:18429658..18429670,+ | |||
|coexpression_cluster_id=C3004 | |||
|description=CAGE_peak_14_at_CACNB2_5end | |description=CAGE_peak_14_at_CACNB2_5end | ||
|id=chr10:18429658..18429670,+ | |id=chr10:18429658..18429670,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000047;6.17e-09;2!CL:0002253;6.17e-09;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002253,6.42e-09,2 | |||
|ontology_enrichment_development_v019=UBERON:0001045;1.53e-16;1 | |||
|ontology_enrichment_disease=DOID:171!6.17e-07!10 | |ontology_enrichment_disease=DOID:171!6.17e-07!10 | ||
|ontology_enrichment_disease_v019=DOID:171;4.32e-07;10 | |||
|ontology_enrichment_disease_v019_2=DOID:171,4.52e-07,10 | |||
|ontology_enrichment_uberon=UBERON:0007023!5.68e-51!115;UBERON:0001049!4.69e-37!57;UBERON:0005068!4.69e-37!57;UBERON:0006241!4.69e-37!57;UBERON:0007135!4.69e-37!57;UBERON:0002616!2.31e-35!59;UBERON:0000073!6.65e-34!94;UBERON:0001016!6.65e-34!94;UBERON:0002780!1.03e-33!41;UBERON:0001890!1.03e-33!41;UBERON:0006240!1.03e-33!41;UBERON:0002346!1.34e-33!90;UBERON:0001017!2.14e-33!82;UBERON:0005743!3.61e-33!86;UBERON:0003080!1.06e-32!42;UBERON:0000955!1.14e-31!69;UBERON:0006238!1.14e-31!69;UBERON:0003075!3.76e-30!86;UBERON:0007284!3.76e-30!86;UBERON:0002020!2.09e-26!34;UBERON:0003528!2.09e-26!34;UBERON:0001893!4.70e-26!34;UBERON:0001869!7.92e-26!32;UBERON:0002791!8.59e-25!33;UBERON:0003056!9.77e-25!61;UBERON:0000924!1.18e-22!173;UBERON:0006601!1.18e-22!173;UBERON:0000033!3.57e-20!123;UBERON:0004121!3.74e-20!169;UBERON:0000153!1.20e-19!129;UBERON:0007811!1.20e-19!129;UBERON:0002619!1.09e-18!22;UBERON:0000956!5.01e-18!25;UBERON:0000203!5.01e-18!25;UBERON:0001950!1.30e-15!20;UBERON:0000922!4.65e-10!612;UBERON:0002308!5.36e-10!9;UBERON:0000125!5.36e-10!9;UBERON:0001872!2.62e-09!5;UBERON:0001894!2.84e-09!7;UBERON:0006222!2.84e-09!7;UBERON:0002050!6.69e-09!605;UBERON:0005423!6.69e-09!605;UBERON:0000369!7.52e-09!4;UBERON:0002435!7.52e-09!4;UBERON:0000204!7.52e-09!4;UBERON:0010082!7.52e-09!4;UBERON:0000481!1.61e-08!347;UBERON:0000468!1.81e-08!659;UBERON:0000923!2.23e-08!604;UBERON:0005291!2.23e-08!604;UBERON:0006598!2.23e-08!604;UBERON:0002532!2.23e-08!604;UBERON:0003296!2.42e-08!4;UBERON:0010133!2.42e-08!4;UBERON:0004111!4.92e-08!241;UBERON:0000025!1.16e-07!194;UBERON:0002420!1.81e-07!9;UBERON:0007245!1.81e-07!9;UBERON:0010009!1.81e-07!9;UBERON:0010011!1.81e-07!9;UBERON:0000454!1.81e-07!9;UBERON:0000475!2.14e-07!365;UBERON:0000200!2.73e-07!6;UBERON:0000483!4.11e-07!309;UBERON:0005383!4.19e-07!3;UBERON:0005382!4.19e-07!3;UBERON:0009663!4.27e-07!7;UBERON:0000467!5.22e-07!625;UBERON:0000480!5.86e-07!626;UBERON:0000119!6.54e-07!312;UBERON:0000477!6.75e-07!286;UBERON:0000062!6.92e-07!511 | |ontology_enrichment_uberon=UBERON:0007023!5.68e-51!115;UBERON:0001049!4.69e-37!57;UBERON:0005068!4.69e-37!57;UBERON:0006241!4.69e-37!57;UBERON:0007135!4.69e-37!57;UBERON:0002616!2.31e-35!59;UBERON:0000073!6.65e-34!94;UBERON:0001016!6.65e-34!94;UBERON:0002780!1.03e-33!41;UBERON:0001890!1.03e-33!41;UBERON:0006240!1.03e-33!41;UBERON:0002346!1.34e-33!90;UBERON:0001017!2.14e-33!82;UBERON:0005743!3.61e-33!86;UBERON:0003080!1.06e-32!42;UBERON:0000955!1.14e-31!69;UBERON:0006238!1.14e-31!69;UBERON:0003075!3.76e-30!86;UBERON:0007284!3.76e-30!86;UBERON:0002020!2.09e-26!34;UBERON:0003528!2.09e-26!34;UBERON:0001893!4.70e-26!34;UBERON:0001869!7.92e-26!32;UBERON:0002791!8.59e-25!33;UBERON:0003056!9.77e-25!61;UBERON:0000924!1.18e-22!173;UBERON:0006601!1.18e-22!173;UBERON:0000033!3.57e-20!123;UBERON:0004121!3.74e-20!169;UBERON:0000153!1.20e-19!129;UBERON:0007811!1.20e-19!129;UBERON:0002619!1.09e-18!22;UBERON:0000956!5.01e-18!25;UBERON:0000203!5.01e-18!25;UBERON:0001950!1.30e-15!20;UBERON:0000922!4.65e-10!612;UBERON:0002308!5.36e-10!9;UBERON:0000125!5.36e-10!9;UBERON:0001872!2.62e-09!5;UBERON:0001894!2.84e-09!7;UBERON:0006222!2.84e-09!7;UBERON:0002050!6.69e-09!605;UBERON:0005423!6.69e-09!605;UBERON:0000369!7.52e-09!4;UBERON:0002435!7.52e-09!4;UBERON:0000204!7.52e-09!4;UBERON:0010082!7.52e-09!4;UBERON:0000481!1.61e-08!347;UBERON:0000468!1.81e-08!659;UBERON:0000923!2.23e-08!604;UBERON:0005291!2.23e-08!604;UBERON:0006598!2.23e-08!604;UBERON:0002532!2.23e-08!604;UBERON:0003296!2.42e-08!4;UBERON:0010133!2.42e-08!4;UBERON:0004111!4.92e-08!241;UBERON:0000025!1.16e-07!194;UBERON:0002420!1.81e-07!9;UBERON:0007245!1.81e-07!9;UBERON:0010009!1.81e-07!9;UBERON:0010011!1.81e-07!9;UBERON:0000454!1.81e-07!9;UBERON:0000475!2.14e-07!365;UBERON:0000200!2.73e-07!6;UBERON:0000483!4.11e-07!309;UBERON:0005383!4.19e-07!3;UBERON:0005382!4.19e-07!3;UBERON:0009663!4.27e-07!7;UBERON:0000467!5.22e-07!625;UBERON:0000480!5.86e-07!626;UBERON:0000119!6.54e-07!312;UBERON:0000477!6.75e-07!286;UBERON:0000062!6.92e-07!511 | ||
|ontology_enrichment_uberon_v019=UBERON:0001154;1.53e-16;1!UBERON:0001153;1.53e-16;1!UBERON:0009854;1.53e-16;1!UBERON:0004907;3.88e-13;5!UBERON:0001255;6.17e-09;2!UBERON:0000007;6.17e-09;2!UBERON:0001556;6.17e-09;2!UBERON:0000160;3.27e-08;17!UBERON:0001155;1.05e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001154,2.63e-16,1;UBERON:0001153,2.63e-16,1;UBERON:0001045,2.63e-16,1;UBERON:0004907,4.96e-13,5;UBERON:0001255,4.34e-09,2;UBERON:0001556,4.34e-09,2;UBERON:0000007,4.70e-09,2;UBERON:0000160,4.03e-08,17;UBERON:0001046,8.19e-08,19;UBERON:0001155,1.20e-07,9 | |||
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|short_description=p14@CACNB2 | |short_description=p14@CACNB2 | ||
}} | }} |
Latest revision as of 11:53, 17 September 2015
Short description: | p14@CACNB2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_14_at_CACNB2_5end |
Coexpression cluster: | C3004_smooth_putamen_bladder_vagina_neuroectodermal_caudate_salivary |
Association with transcript: | 0bp_to_ENST00000352115, ENST00000377328_5end |
EntrezGene: | CACNB2 |
HGNC: | 1402 |
UniProt: | A6PVM6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of large intestine | 6.42e-09 | 2 |
Ontology term | p-value | n |
---|---|---|
vermiform appendix | 2.63e-16 | 1 |
caecum | 2.63e-16 | 1 |
midgut | 2.63e-16 | 1 |
lower digestive tract | 4.96e-13 | 5 |
urinary bladder | 4.34e-09 | 2 |
lower urinary tract | 4.34e-09 | 2 |
pituitary gland | 4.70e-09 | 2 |
intestine | 4.03e-08 | 17 |
hindgut | 8.19e-08 | 19 |
colon | 1.20e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
neuroectodermal tumor | 4.52e-07 | 10 |