FFCP PHASE1:Hg19::chr11:82996708..82996719,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=60492 | |EntrezGene=60492 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28108 | |HGNC=28108 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=291bp_to_ENST00000525916_5end | |association_with_transcript=291bp_to_ENST00000525916_5end | ||
|cluster_id=chr11:82996708..82996719,- | |||
|description=CAGE_peak_7_at_CCDC90B_5end | |description=CAGE_peak_7_at_CCDC90B_5end | ||
|id=chr11:82996708..82996719,- | |id=chr11:82996708..82996719,- | ||
|ontology_enrichment_celltype=CL:0000066!8.31e-11!254;CL:0002076!7.04e-09!43;CL:0000223!2.14e-07!59;CL:0002251!3.80e-07!21 | |ontology_enrichment_celltype=CL:0000066!8.31e-11!254;CL:0002076!7.04e-09!43;CL:0000223!2.14e-07!59;CL:0002251!3.80e-07!21 | ||
|ontology_enrichment_celltype_v019=CL:0002159;1.05e-18;14!CL:0002076;2.13e-17;42!CL:0000150;1.37e-13;9!CL:0000622;1.57e-13;5!CL:0002251;2.25e-13;20!CL:0002368;1.28e-11;13!CL:0000154;3.39e-11;6!CL:0000362;2.93e-09;9!CL:0002623;3.05e-09;3!CL:0002077;3.18e-09;34!CL:0002166;5.77e-08;3!CL:0002621;5.77e-08;3!CL:0000240;5.98e-07;6!CL:0000311;5.98e-07;6!CL:0000079;5.98e-07;6!CL:0000237;5.98e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002076,1.11e-21,42;CL:0000066,5.39e-20,253;CL:0000223,6.67e-19,58;CL:0002159,7.60e-19,14;CL:0000622,1.27e-13,5;CL:0002251,1.56e-13,20;CL:0000150,1.93e-13,9;CL:0000076,3.50e-13,63;CL:0002368,1.84e-11,13;CL:0000154,2.84e-11,6;CL:0002077,5.19e-11,34;CL:0000362,3.20e-09,9;CL:0002623,3.82e-09,3;CL:0002166,3.06e-08,3;CL:0002621,4.34e-08,3;CL:0000240,8.61e-07,6;CL:0000311,8.61e-07,6;CL:0000079,8.61e-07,6;CL:0000237,8.61e-07,6;CL:0000036,8.61e-07,6;CL:0000357,8.61e-07,6;CL:0000114,8.61e-07,6 | |||
|ontology_enrichment_development_v019=CL:0000223;1.51e-09;58!CL:0000357;5.98e-07;6!CL:0000114;5.98e-07;6 | |||
|ontology_enrichment_disease=DOID:14566!3.51e-08!239;DOID:162!4.80e-08!235;DOID:1749!4.88e-08!14;DOID:305!6.27e-07!106 | |ontology_enrichment_disease=DOID:14566!3.51e-08!239;DOID:162!4.80e-08!235;DOID:1749!4.88e-08!14;DOID:305!6.27e-07!106 | ||
|ontology_enrichment_disease_v019=DOID:1749;1.93e-19;14 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,3.80e-20,14 | |||
|ontology_enrichment_uberon=UBERON:0004119!9.54e-07!169;UBERON:0000925!9.54e-07!169;UBERON:0006595!9.54e-07!169 | |ontology_enrichment_uberon=UBERON:0004119!9.54e-07!169;UBERON:0000925!9.54e-07!169;UBERON:0006595!9.54e-07!169 | ||
|ontology_enrichment_uberon_v019=UBERON:0000161;1.96e-09;19!UBERON:0000166;1.96e-09;19!UBERON:0000486;4.27e-09;12!UBERON:0003729;1.26e-08;13!UBERON:0000365;4.49e-08;5!UBERON:0001949;5.77e-08;3!UBERON:0000165;2.54e-07;28 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003102,3.71e-09,99;UBERON:0003729,7.76e-09,13;UBERON:0001949,4.34e-08,3;UBERON:0000166,4.90e-08,22;UBERON:0000365,5.75e-08,5;UBERON:0001004,1.04e-07,74;UBERON:0000161,1.14e-07,36;UBERON:0000165,4.27e-07,29;UBERON:0000930,4.27e-07,29;UBERON:0000344,8.37e-07,20 | |||
|phase1_expression=0.181678379270557,0.428201047781966,0.422863212287913,0,1.34088328328186,0,0,0,0.783556884599516,0,0,0,0,0.247532705920093,0,0,0,0,0,0.369363174230364,0,0,0,0,0.125542639594803,0.764134057479513,0.985207073399349,0.708397031823113,0,0,0,3.67768489791571,0.30120591877825,1.10926203050036,0.92960640696362,0.142169232487422,0,0.553995408531877,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.344745680736619,0,0,0,0,0,0,0,0,0,0,0,0,0.56738522469114,0,0,0,0,0,0,0.316462387440884,0,0.212604299965044,0,0,0,0,0,0,0,0,0,0.889509253863555,0.426730222566507,0,0.574752439954483,0,0,0,0,0,0,0,0.263384084775077,0.196709770113833,0,0.205601498999509,0,0,0.473447805734733,0,0.111410456885174,0,0,0,0.25618263945135,0.130059347559878,0,0,0.869409257205157,0.14828656316206,0,0,0.113309342697566,0,0.34362744548263,0,0,0,0,0,0,0,0,0,0,0.267440195783507,0,0,0.670700859703636,0.12786256184353,0.722878304769133,0,0.289693037921647,0,0,0.0945348171640679,0.221729397462564,0.263504357079378,0,1.09288586487763,1.85392221392215,0,0.174129737299267,0.26591592103773,0,0,0,0.198762407366705,0,0.347140501607594,0,0.419499436209906,0,0,0,0.35576626268671,0,0,0,0.732186172644509,0,0,0.0892997282840798,0,0,0,0,0,0,0,0.872188104285069,0,0.12663051166458,0.397227542439656,0.286836620748814,0,1.12135520028461,0,0,0.311211035399766,0.134710672069688,0.163461903113459,0,0,0,0,0,0.149448680551801,0.117434498643765,0,0,0,0,0.206651562351531,0,0,0,0,0,0.250237039743928,0,0,0.30648779579902,0.45071417671979,0,0.179389635688862,0.213557388818567,0.211931901159562,0,0,0,0.37223371266318,0,0.292311015483596,0,0.276149695926898,0.161646056818812,0,0,0.169560592310488,1.73934767846967,1.36373060295417,2.58124135850103,0.121973706129595,0.265059536642971,0.348581828608555,0.310983165046111,0,0.36497735907583,0,0,0,1.39310378409594,0,0.118306800039844,0.168584690078102,0.241011029883482,0.330881918197182,0.217879444092406,0,0.134831308160164,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,1.42675371031213,1.1240175325762,2.31216636546751,3.24059558054854,0,0,0,0,0.70445216541493,0,0,0,0,0,0.246217006087397,0.468008530278475,0,1.87467667973554,1.6798212819886,2.26840155587818,8.41850113406774,5.81267877027924,1.53353071666084,0.492663237895943,0.176096868026452,0,0.144119953416961,0,0,0,0,1.71072446022705,0.205654985406647,0.300343057843917,0,0,0,0,0.517086863031111,0,0,0.26593811658487,0,0.257207374262142,0,0,0.285955987316295,0,0.823240336780769,0,0.355391948742546,0,0.301439377059586,0,0.099972991182057,0,0,2.10833939483032,0,0,0,0.289562613335158,0.205476322550383,0.358121926479791,0,0.197030760201927,0.215627574859517,0.128343036279748,0.254094624222463,0,0,0.167516265334349,0,0,0,0,0.36807447515742,1.50051156317903,0,0.207970861530807,0.535286966391485,0.630809660135739,0.117141414992713,0.601892199455438,0,0,0,0,0.60818530127658,0,0,0,0.215714200818617,0.106727557803444,0,0,0,0.248107807818777,0,0.561320188866147,0.384417447767103,1.02341449813341,0.160853921143607,0,0,0.532685175939381,0.821271560138091,0,0.232420756919918,0.120859449591622,2.40607764363942,2.02578175658972,0.229628896329213,0,0.393373244878272,0,0.0770153371044148,0,0,0.105551628892876,0,0.170093705276516,0,0,0,0,0.254876273045038,0,0,0,0,0,0,0,0.206082023295445,0.0915694648183434,0.082509499920588,1.72279661398852,2.60024098414608,0,0.193341436584244,0,0.307007349452259,0.275673144969061,0.322260734604821,0.145016693914229,0,0,5.45440220691228,2.69066094311149,1.53135254993501,2.8324178639554,0.929691098594572,0,0,0.308033580176089,0,0,0,0,0.372158369359667,0.316379424718726,0.190630193923825,0,0,0,0,0.179872457583315,0.274537029736055,0.353437207037059,0,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0,0.655894752046633,0,0,0,0,0,0,0.354761064070598,0.633322905892992,0.987884678879706,0,0,6.92799211623687,0,0,0.282431402330337,1.29151611801369,1.68471475667626,0.443430153536676,3.67557440331135,0,0,0,0,0,0,0,0,0.534120355637366,0,3.43056302373444,0.371606350251437,0.865615277858669,0,0.318852545457645,0.199579371432817,0.191505370132367,0.846694330895531,0,0.280797178113459,1.59764275323235,0.313359791546046,0,0.50787533340481,0.1605880751037,0,1.27753871307098,0,0.307240764308458,0.671028323677248,0,0,0.278406173895242,0,0,0.66614393599564,2.81974010175699,0.561421621224659,0,0.121360521749513,0.334330152832435,0,0,0,0.307160702099232,0,0,0,0.329607748453519,0,0,0,0.251932747854276,0.20453736500431,0.738508832766417,0.311039587661807,0.359473404589307,0,1.02314474045374,0.197286811273867,0,0,0,0,0,0.520855522170466,0.262379999988587,0,1.2517279311405,1.01701460117107,1.18193840883968,0,0,0.520874984799877,0,0,0,0,0,0,2.1787692703798,2.37020365273626,0.230850775511391,0,0.23056390438806,0,0,0,0.0915975934018623,0,0,0.156980256395025,0.166211681900156,0,0,0,0,0,0,0.326465616318295,0.282706142867882,0.216388639742091,0,0.0884575645033392,1.22206028986725,1.48260564340311,2.59484271787656,2.92381458615275,0,0,0,0.547364367646998,1.56531695145672,1.21390189767046,0,0,0,0.126373159256976,0.150323419414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| ||
|short_description=p7@CCDC90B | |short_description=p7@CCDC90B | ||
}} | }} |
Latest revision as of 18:54, 24 September 2015
Short description: | p7@CCDC90B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_CCDC90B_5end |
Coexpression cluster: | NA |
Association with transcript: | 291bp_to_ENST00000525916_5end |
EntrezGene: | CCDC90B |
HGNC: | 28108 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endo-epithelial cell | 1.11e-21 | 42 |
epithelial cell | 5.39e-20 | 253 |
endodermal cell | 6.67e-19 | 58 |
general ecto-epithelial cell | 7.60e-19 | 14 |
acinar cell | 1.27e-13 | 5 |
epithelial cell of alimentary canal | 1.56e-13 | 20 |
glandular epithelial cell | 1.93e-13 | 9 |
squamous epithelial cell | 3.50e-13 | 63 |
respiratory epithelial cell | 1.84e-11 | 13 |
protein secreting cell | 2.84e-11 | 6 |
ecto-epithelial cell | 5.19e-11 | 34 |
epidermal cell | 3.20e-09 | 9 |
acinar cell of salivary gland | 3.82e-09 | 3 |
epithelial cell of Malassez | 3.06e-08 | 3 |
gingival epithelial cell | 4.34e-08 | 3 |
stratified squamous epithelial cell | 8.61e-07 | 6 |
keratin accumulating cell | 8.61e-07 | 6 |
stratified epithelial cell | 8.61e-07 | 6 |
keratinizing barrier epithelial cell | 8.61e-07 | 6 |
epithelial fate stem cell | 8.61e-07 | 6 |
stratified epithelial stem cell | 8.61e-07 | 6 |
surface ectodermal cell | 8.61e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
surface structure | 3.71e-09 | 99 |
mouth mucosa | 7.76e-09 | 13 |
gingival epithelium | 4.34e-08 | 3 |
oral opening | 4.90e-08 | 22 |
urothelium | 5.75e-08 | 5 |
respiratory system | 1.04e-07 | 74 |
orifice | 1.14e-07 | 36 |
mouth | 4.27e-07 | 29 |
stomodeum | 4.27e-07 | 29 |
mucosa | 8.37e-07 | 20 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 3.80e-20 | 14 |