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FFCP PHASE1:Hg19::chr17:46622229..46622257,-: Difference between revisions

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(Created page with "{{FFCP |id=chr17:46622229..46622257,- |short_description=p6@HOXB2 |description=CAGE_peak_6_at_HOXB2_5end |association_with_transcript=-213bp_to_ENST00000326226_5end |Entr...")
 
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{{FFCP
{{FFCP
|id=chr17:46622229..46622257,-
|DHSsupport=supported 
|short_description=p6@HOXB2
|DPIdataset=robust
|description=CAGE_peak_6_at_HOXB2_5end
|association_with_transcript=-213bp_to_ENST00000326226_5end
|EntrezGene=3212
|EntrezGene=3212
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding
|HGNC=5113
|HGNC=5113
|TSSclassifier=strong
|UniProt=
|UniProt=
|association_with_transcript=-213bp_to_ENST00000326226_5end
|cluster_id=chr17:46622229..46622257,-
|description=CAGE_peak_6_at_HOXB2_5end
|id=chr17:46622229..46622257,-
|ontology_enrichment_celltype=CL:0000055!1.01e-10!180;CL:0000222!3.84e-09!119;CL:0000183!7.53e-09!59;CL:0000680!1.32e-08!57;CL:0000056!1.32e-08!57;CL:0000355!1.32e-08!57;CL:0000187!7.98e-08!54;CL:1000497!1.06e-07!18;CL:0002518!1.06e-07!18;CL:1000507!7.90e-07!12;CL:1000494!7.90e-07!12
|ontology_enrichment_celltype_v019=CL:1000497;2.79e-11;17!CL:0002518;2.79e-11;17!CL:1000507;8.63e-11;10!CL:1000494;8.63e-11;10!CL:1000449;9.05e-10;15!CL:0002539;2.77e-07;10!CL:0002681;6.17e-07;12!CL:0002584;6.17e-07;12
|ontology_enrichment_celltype_v019_2=CL:1000497,2.26e-11,17;CL:0002518,2.26e-11,17;CL:1000507,1.21e-10,10;CL:1000494,1.21e-10,10;CL:1000449,7.88e-10,15;CL:0000333,1.35e-09,41;CL:0002539,1.76e-07,10;CL:0000680,2.02e-07,58;CL:0000056,2.02e-07,58;CL:0000355,2.02e-07,58;CL:0000222,4.05e-07,121;CL:0002681,5.36e-07,12;CL:0002584,5.36e-07,12;CL:0002321,6.06e-07,250
|ontology_enrichment_development_v019=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019=DOID:1036;3.77e-07;8
|ontology_enrichment_disease_v019_2=DOID:14566,4.24e-09,239;DOID:162,7.44e-09,235;DOID:1036,3.42e-07,8
|ontology_enrichment_uberon=UBERON:0003914!7.47e-10!118;UBERON:0000489!1.15e-09!32;UBERON:0002113!1.27e-09!27;UBERON:0003918!1.27e-09!27;UBERON:0005095!1.27e-09!27;UBERON:0007687!1.27e-09!27;UBERON:0004290!1.39e-09!70;UBERON:0005256!1.03e-08!143;UBERON:0005172!1.98e-07!55;UBERON:0005173!1.98e-07!55;UBERON:0001134!2.75e-07!61;UBERON:0002036!2.75e-07!61;UBERON:0003082!2.75e-07!61;UBERON:0000486!3.24e-07!82;UBERON:0002385!3.73e-07!63;UBERON:0001015!3.73e-07!63;UBERON:0000383!3.73e-07!63;UBERON:0002100!4.18e-07!216;UBERON:0006555!5.99e-07!17;UBERON:0005103!5.99e-07!17;UBERON:0000083!5.99e-07!17;UBERON:0009201!5.99e-07!17;UBERON:0004819!5.99e-07!17;UBERON:0006553!5.99e-07!17;UBERON:0003074!5.99e-07!17;UBERON:0003060!5.99e-07!17;UBERON:0000080!7.48e-07!18;UBERON:0002120!7.48e-07!18;UBERON:0004875!7.48e-07!18;UBERON:0005721!7.48e-07!18;UBERON:0005754!7.48e-07!18;UBERON:0007297!7.48e-07!18;UBERON:0009773!7.90e-07!12;UBERON:0001231!7.90e-07!12;UBERON:0004810!7.90e-07!12
|ontology_enrichment_uberon_v019=UBERON:0002113;4.16e-14;24!UBERON:0011143;4.16e-14;24!UBERON:0000489;4.96e-13;29!UBERON:0004211;8.63e-11;10!UBERON:0009773;8.63e-11;10!UBERON:0001231;8.63e-11;10!UBERON:0004810;8.63e-11;10!UBERON:0006554;7.94e-10;30!UBERON:0001008;7.94e-10;30!UBERON:0006555;9.05e-10;15!UBERON:0004819;9.05e-10;15!UBERON:0001285;9.05e-10;15!UBERON:0007684;9.05e-10;15!UBERON:0000353;1.29e-07;15!UBERON:0004237;2.77e-07;10!UBERON:0004695;2.77e-07;10!UBERON:0002111;2.77e-07;10!UBERON:0004178;2.77e-07;10!UBERON:0001851;3.41e-07;15!UBERON:0005172;6.08e-07;52!UBERON:0005173;6.08e-07;52!UBERON:0001225;6.17e-07;12!UBERON:0008987;6.17e-07;12
|ontology_enrichment_uberon_v019_2=UBERON:0002113,8.71e-14,26;UBERON:0003918,8.71e-14,26;UBERON:0011143,8.71e-14,26;UBERON:0005095,8.71e-14,26;UBERON:0007687,8.71e-14,26;UBERON:0000489,7.25e-13,31;UBERON:0003104,2.19e-12,160;UBERON:0009142,2.19e-12,160;UBERON:0004810,1.21e-10,10;UBERON:0006555,3.15e-10,16;UBERON:0004819,3.15e-10,16;UBERON:0007503,3.67e-10,78;UBERON:0005172,4.82e-10,54;UBERON:0005173,4.82e-10,54;UBERON:0004211,7.88e-10,15;UBERON:0009773,7.88e-10,15;UBERON:0001231,7.88e-10,15;UBERON:0001285,7.88e-10,15;UBERON:0007684,7.88e-10,15;UBERON:0004208,7.88e-10,15;UBERON:0003914,9.42e-10,117;UBERON:0002329,8.49e-09,71;UBERON:0003059,8.49e-09,71;UBERON:0007282,8.49e-09,71;UBERON:0004290,8.49e-09,71;UBERON:0009618,8.49e-09,71;UBERON:0003077,1.59e-08,72;UBERON:0007285,1.59e-08,72;UBERON:0005256,2.91e-08,122;UBERON:0007524,2.92e-08,73;UBERON:0002100,3.41e-08,199;UBERON:0002417,4.54e-08,60;UBERON:0000916,4.54e-08,60;UBERON:0000353,9.61e-08,15;UBERON:0004237,1.76e-07,10;UBERON:0004695,1.76e-07,10;UBERON:0002111,1.76e-07,10;UBERON:0004178,1.76e-07,10;UBERON:0000486,3.43e-07,83;UBERON:0001851,3.72e-07,15;UBERON:0001225,5.36e-07,12;UBERON:0008987,5.36e-07,12;UBERON:0003103,9.02e-07,68
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|short_description=p6@HOXB2
}}
}}

Latest revision as of 06:45, 25 September 2015

Short description:p6@HOXB2
Species:Human (Homo sapiens)
DPI dataset: Robust
TSS-like-by-RIKEN-classifier(Yes/No): Yes
DHS support(Yes/No): Yes
Description: CAGE_peak_6_at_HOXB2_5end
Coexpression cluster:NA
Association with transcript: -213bp_to_ENST00000326226_5end
EntrezGene:HOXB2
HGNC: 5113
UniProt: NA
Genome view:ZENBU


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CAGE Expression



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  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

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