FFCP PHASE1:Hg19::chr15:68805210..68805226,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr15:68805210..68805226,+ | |||
|coexpression_cluster_id=C3507 | |||
|description=CAGE_peak_at_chr15:68805210..68805226,+ | |description=CAGE_peak_at_chr15:68805210..68805226,+ | ||
|id=chr15:68805210..68805226,+ | |id=chr15:68805210..68805226,+ | ||
|ontology_enrichment_celltype=CL:0002580!3.41e-12!3;CL:0002579!6.55e-12!3;CL:0002334!8.50e-11!12;CL:0002620!3.30e-10!23;CL:0000667!8.28e-10!6;CL:0000058!8.28e-10!6;CL:0000138!8.28e-10!6;CL:0000197!2.14e-09!6;CL:0000098!2.14e-09!6;CL:0002167!2.14e-09!6;CL:0000057!2.76e-09!75;CL:0000055!4.70e-08!180;CL:0002617!8.20e-08!2 | |ontology_enrichment_celltype=CL:0002580!3.41e-12!3;CL:0002579!6.55e-12!3;CL:0002334!8.50e-11!12;CL:0002620!3.30e-10!23;CL:0000667!8.28e-10!6;CL:0000058!8.28e-10!6;CL:0000138!8.28e-10!6;CL:0000197!2.14e-09!6;CL:0000098!2.14e-09!6;CL:0002167!2.14e-09!6;CL:0000057!2.76e-09!75;CL:0000055!4.70e-08!180;CL:0002617!8.20e-08!2 | ||
|ontology_enrichment_celltype_v019=CL:0002580;2.55e-43;3!CL:0002334;1.84e-29;12!CL:0002579;1.27e-19;3!CL:0000222;7.45e-16;1!CL:0002569;1.24e-10;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002580,3.41e-43,3;CL:0002334,1.64e-29,12;CL:0002579,8.67e-20,3;CL:0002569,1.24e-10,6 | |||
|ontology_enrichment_development_v019=UBERON:0000358;1.15e-15;1 | |||
|ontology_enrichment_disease=DOID:17!7.99e-07!5;DOID:450!7.99e-07!5;DOID:66!7.99e-07!5;DOID:423!7.99e-07!5;DOID:0080000!7.99e-07!5;DOID:11722!7.99e-07!5 | |ontology_enrichment_disease=DOID:17!7.99e-07!5;DOID:450!7.99e-07!5;DOID:66!7.99e-07!5;DOID:423!7.99e-07!5;DOID:0080000!7.99e-07!5;DOID:11722!7.99e-07!5 | ||
|ontology_enrichment_disease_v019=DOID:3369;1.15e-15;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3369,9.99e-16,1 | |||
|ontology_enrichment_uberon=UBERON:0003688!1.97e-15!6;UBERON:0002358!1.97e-15!6;UBERON:0003684!1.97e-15!6;UBERON:0001178!1.97e-15!6;UBERON:0000310!5.87e-09!10;UBERON:0001443!4.15e-08!11;UBERON:0004457!1.61e-07!12;UBERON:0000042!1.61e-07!12 | |ontology_enrichment_uberon=UBERON:0003688!1.97e-15!6;UBERON:0002358!1.97e-15!6;UBERON:0003684!1.97e-15!6;UBERON:0001178!1.97e-15!6;UBERON:0000310!5.87e-09!10;UBERON:0001443!4.15e-08!11;UBERON:0004457!1.61e-07!12;UBERON:0000042!1.61e-07!12 | ||
|ontology_enrichment_uberon_v019=UBERON:0002331;1.30e-13;10!UBERON:0000310;1.67e-13;10!UBERON:0001443;2.49e-12;11!UBERON:0003422;1.24e-10;6!UBERON:0003688;2.64e-10;6!UBERON:0002358;2.64e-10;6!UBERON:0003684;2.64e-10;6!UBERON:0001178;2.64e-10;6!UBERON:0003104;3.04e-09;7!UBERON:0009142;3.04e-09;7!UBERON:0004457;3.67e-07;9!UBERON:0000042;3.67e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002331,1.30e-13,10;UBERON:0000358,1.30e-13,10;UBERON:0000307,1.30e-13,10;UBERON:0000091,1.30e-13,10;UBERON:0000087,1.30e-13,10;UBERON:0007010,1.30e-13,10;UBERON:0007806,1.30e-13,10;UBERON:0008780,1.30e-13,10;UBERON:0005728,1.30e-13,10;UBERON:0000310,1.82e-13,10;UBERON:0001443,2.69e-12,11;UBERON:0003422,1.24e-10,6;UBERON:0003688,2.19e-10,6;UBERON:0002358,2.19e-10,6;UBERON:0003684,2.19e-10,6;UBERON:0001178,2.19e-10,6 | |||
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| ||
|short_description=p@chr15:68805210..68805226,+ | |short_description=p@chr15:68805210..68805226,+ | ||
}} | }} |
Latest revision as of 03:43, 25 July 2015
Short description: | p@chr15:68805210..68805226, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr15:68805210..68805226, + |
Coexpression cluster: | C3507_Preadipocyte_mesodermal_Multipotent_Ewing_Chondrocyte_Osteoblast_mesenchymal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
preadipocyte of the breast | 3.41e-43 | 3 |
preadipocyte | 1.64e-29 | 12 |
omentum preadipocyte | 8.67e-20 | 3 |
mesenchymal stem cell of umbilical cord | 1.24e-10 | 6 |
Ontology term | p-value | n |
---|---|---|
umbilical cord | 1.30e-13 | 10 |
blastocyst | 1.30e-13 | 10 |
blastula | 1.30e-13 | 10 |
bilaminar disc | 1.30e-13 | 10 |
inner cell mass | 1.30e-13 | 10 |
cleaving embryo | 1.30e-13 | 10 |
connecting stalk | 1.30e-13 | 10 |
inner cell mass derived epiblast | 1.30e-13 | 10 |
extraembryonic mesoderm | 1.30e-13 | 10 |
breast | 1.82e-13 | 10 |
chest | 2.69e-12 | 11 |
mesenchyme of umbilical cord | 1.24e-10 | 6 |
omentum | 2.19e-10 | 6 |
peritoneum | 2.19e-10 | 6 |
abdominal cavity | 2.19e-10 | 6 |
visceral peritoneum | 2.19e-10 | 6 |
Ontology term | p-value | n |
---|---|---|
peripheral primitive neuroectodermal tumor | 9.99e-16 | 1 |