FFCP PHASE1:Hg19::chr1:110546510..110546515,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10768 | |EntrezGene=10768 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=344 | |HGNC=344 | ||
|TSSclassifier=strong | |||
|UniProt=B4E168,O43865 | |UniProt=B4E168,O43865 | ||
|association_with_transcript=-54bp_to_NM_001242675,NM_001242676_5end | |association_with_transcript=-54bp_to_NM_001242675,NM_001242676_5end | ||
|cluster_id=chr1:110546510..110546515,+ | |||
|coexpression_cluster_id=C162 | |||
|description=CAGE_peak_28_at_AHCYL1_5end | |description=CAGE_peak_28_at_AHCYL1_5end | ||
|id=chr1:110546510..110546515,+ | |id=chr1:110546510..110546515,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006241;9.45e-18;3!UBERON:0003057;9.45e-18;3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!2.69e-45!57;UBERON:0005068!2.69e-45!57;UBERON:0006241!2.69e-45!57;UBERON:0007135!2.69e-45!57;UBERON:0001017!2.48e-39!82;UBERON:0005743!2.58e-37!86;UBERON:0002298!6.42e-36!8;UBERON:0000955!7.01e-36!69;UBERON:0006238!7.01e-36!69;UBERON:0002616!1.97e-35!59;UBERON:0000073!2.20e-33!94;UBERON:0001016!2.20e-33!94;UBERON:0003075!1.39e-31!86;UBERON:0007284!1.39e-31!86;UBERON:0003076!2.14e-31!15;UBERON:0003057!2.14e-31!15;UBERON:0002346!5.50e-30!90;UBERON:0007023!7.55e-30!115;UBERON:0004733!7.89e-24!12;UBERON:0002028!7.89e-24!12;UBERON:0007277!7.89e-24!12;UBERON:0002308!1.44e-23!9;UBERON:0000125!1.44e-23!9;UBERON:0000033!1.97e-22!123;UBERON:0004732!6.23e-22!13;UBERON:0002020!7.16e-22!34;UBERON:0003528!7.16e-22!34;UBERON:0002780!3.48e-21!41;UBERON:0001890!3.48e-21!41;UBERON:0006240!3.48e-21!41;UBERON:0000153!3.53e-21!129;UBERON:0007811!3.53e-21!129;UBERON:0003080!1.24e-20!42;UBERON:0002791!8.19e-19!33;UBERON:0001896!8.57e-19!3;UBERON:0005290!8.57e-19!3;UBERON:0010096!8.57e-19!3;UBERON:0000988!9.11e-19!3;UBERON:0006331!1.23e-18!3;UBERON:0004121!3.03e-18!169;UBERON:0001893!3.23e-18!34;UBERON:0000924!1.04e-17!173;UBERON:0006601!1.04e-17!173;UBERON:0002420!2.51e-16!9;UBERON:0007245!2.51e-16!9;UBERON:0010009!2.51e-16!9;UBERON:0010011!2.51e-16!9;UBERON:0000454!2.51e-16!9;UBERON:0009663!7.12e-14!7;UBERON:0003056!1.62e-13!61;UBERON:0001897!1.66e-13!2;UBERON:0002148!3.06e-13!2;UBERON:0009662!3.06e-13!2;UBERON:0001869!6.35e-13!32;UBERON:0000025!1.80e-11!194;UBERON:0000349!4.63e-11!5;UBERON:0002680!6.05e-11!9;UBERON:0001895!6.05e-11!9;UBERON:0010092!6.05e-11!9;UBERON:0002240!2.32e-09!3;UBERON:0004111!2.58e-09!241;UBERON:0002619!1.47e-08!22;UBERON:0000477!6.16e-08!286;UBERON:0000956!1.65e-07!25;UBERON:0000203!1.65e-07!25;UBERON:0002336!2.09e-07!1;UBERON:0001018!2.09e-07!1;UBERON:0002473!2.09e-07!1;UBERON:0005340!2.09e-07!1;UBERON:0002316!2.09e-07!1;UBERON:0003544!2.09e-07!1;UBERON:0001020!2.09e-07!1;UBERON:0005970!2.09e-07!1;UBERON:0002437!2.09e-07!1;UBERON:0003112!3.41e-07!1;UBERON:0000032!3.41e-07!1;UBERON:0005253!3.41e-07!1;UBERON:0003128!3.41e-07!1;UBERON:0002241!3.41e-07!1;UBERON:0001703!3.41e-07!1;UBERON:0004761!3.41e-07!1;UBERON:0009617!3.41e-07!1;UBERON:0002038!4.08e-07!1;UBERON:0009661!4.08e-07!1;UBERON:0001871!4.86e-07!7;UBERON:0002581!6.97e-07!1;UBERON:0001882!7.40e-07!1;UBERON:0005403!7.40e-07!1;UBERON:0000369!8.10e-07!4;UBERON:0002435!8.10e-07!4;UBERON:0000204!8.10e-07!4;UBERON:0010082!8.10e-07!4 | |ontology_enrichment_uberon=UBERON:0001049!2.69e-45!57;UBERON:0005068!2.69e-45!57;UBERON:0006241!2.69e-45!57;UBERON:0007135!2.69e-45!57;UBERON:0001017!2.48e-39!82;UBERON:0005743!2.58e-37!86;UBERON:0002298!6.42e-36!8;UBERON:0000955!7.01e-36!69;UBERON:0006238!7.01e-36!69;UBERON:0002616!1.97e-35!59;UBERON:0000073!2.20e-33!94;UBERON:0001016!2.20e-33!94;UBERON:0003075!1.39e-31!86;UBERON:0007284!1.39e-31!86;UBERON:0003076!2.14e-31!15;UBERON:0003057!2.14e-31!15;UBERON:0002346!5.50e-30!90;UBERON:0007023!7.55e-30!115;UBERON:0004733!7.89e-24!12;UBERON:0002028!7.89e-24!12;UBERON:0007277!7.89e-24!12;UBERON:0002308!1.44e-23!9;UBERON:0000125!1.44e-23!9;UBERON:0000033!1.97e-22!123;UBERON:0004732!6.23e-22!13;UBERON:0002020!7.16e-22!34;UBERON:0003528!7.16e-22!34;UBERON:0002780!3.48e-21!41;UBERON:0001890!3.48e-21!41;UBERON:0006240!3.48e-21!41;UBERON:0000153!3.53e-21!129;UBERON:0007811!3.53e-21!129;UBERON:0003080!1.24e-20!42;UBERON:0002791!8.19e-19!33;UBERON:0001896!8.57e-19!3;UBERON:0005290!8.57e-19!3;UBERON:0010096!8.57e-19!3;UBERON:0000988!9.11e-19!3;UBERON:0006331!1.23e-18!3;UBERON:0004121!3.03e-18!169;UBERON:0001893!3.23e-18!34;UBERON:0000924!1.04e-17!173;UBERON:0006601!1.04e-17!173;UBERON:0002420!2.51e-16!9;UBERON:0007245!2.51e-16!9;UBERON:0010009!2.51e-16!9;UBERON:0010011!2.51e-16!9;UBERON:0000454!2.51e-16!9;UBERON:0009663!7.12e-14!7;UBERON:0003056!1.62e-13!61;UBERON:0001897!1.66e-13!2;UBERON:0002148!3.06e-13!2;UBERON:0009662!3.06e-13!2;UBERON:0001869!6.35e-13!32;UBERON:0000025!1.80e-11!194;UBERON:0000349!4.63e-11!5;UBERON:0002680!6.05e-11!9;UBERON:0001895!6.05e-11!9;UBERON:0010092!6.05e-11!9;UBERON:0002240!2.32e-09!3;UBERON:0004111!2.58e-09!241;UBERON:0002619!1.47e-08!22;UBERON:0000477!6.16e-08!286;UBERON:0000956!1.65e-07!25;UBERON:0000203!1.65e-07!25;UBERON:0002336!2.09e-07!1;UBERON:0001018!2.09e-07!1;UBERON:0002473!2.09e-07!1;UBERON:0005340!2.09e-07!1;UBERON:0002316!2.09e-07!1;UBERON:0003544!2.09e-07!1;UBERON:0001020!2.09e-07!1;UBERON:0005970!2.09e-07!1;UBERON:0002437!2.09e-07!1;UBERON:0003112!3.41e-07!1;UBERON:0000032!3.41e-07!1;UBERON:0005253!3.41e-07!1;UBERON:0003128!3.41e-07!1;UBERON:0002241!3.41e-07!1;UBERON:0001703!3.41e-07!1;UBERON:0004761!3.41e-07!1;UBERON:0009617!3.41e-07!1;UBERON:0002038!4.08e-07!1;UBERON:0009661!4.08e-07!1;UBERON:0001871!4.86e-07!7;UBERON:0002581!6.97e-07!1;UBERON:0001882!7.40e-07!1;UBERON:0005403!7.40e-07!1;UBERON:0000369!8.10e-07!4;UBERON:0002435!8.10e-07!4;UBERON:0000204!8.10e-07!4;UBERON:0010082!8.10e-07!4 | ||
|ontology_enrichment_uberon_v019=UBERON:0001897;4.32e-26;2!UBERON:0010225;4.32e-26;2!UBERON:0001875;7.14e-26;2!UBERON:0006514;7.14e-26;2!UBERON:0001896;9.45e-18;3!UBERON:0002240;9.45e-18;3!UBERON:0005174;9.45e-18;3!UBERON:0005290;9.45e-18;3!UBERON:0001137;9.45e-18;3!UBERON:0002784;8.81e-14;4!UBERON:0002298;1.44e-09;6!UBERON:0001894;1.89e-08;7!UBERON:0009663;2.18e-08;7!UBERON:0000073;2.46e-07;53!UBERON:0002616;2.46e-07;53!UBERON:0002420;8.37e-07;9!UBERON:0000125;8.37e-07;9!UBERON:0007245;8.37e-07;9!UBERON:0002308;8.37e-07;9!UBERON:0010009;8.37e-07;9!UBERON:0010011;8.37e-07;9!UBERON:0000454;8.37e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001897,4.32e-26,2;UBERON:0010225,4.32e-26,2;UBERON:0001875,7.14e-26,2;UBERON:0006514,7.14e-26,2;UBERON:0002240,8.00e-18,3;UBERON:0005174,8.00e-18,3;UBERON:0001137,8.00e-18,3;UBERON:0001896,1.12e-17,3;UBERON:0005290,1.12e-17,3;UBERON:0010096,1.12e-17,3;UBERON:0001049,9.92e-15,56;UBERON:0005068,9.92e-15,56;UBERON:0006241,9.92e-15,56;UBERON:0007135,9.92e-15,56;UBERON:0003076,3.15e-14,15;UBERON:0003057,3.15e-14,15;UBERON:0002784,8.82e-14,4;UBERON:0001017,2.17e-10,81;UBERON:0003075,2.17e-10,82;UBERON:0007284,2.17e-10,82;UBERON:0002346,5.98e-10,86;UBERON:0002298,1.57e-09,6;UBERON:0001016,1.88e-09,89;UBERON:0000073,3.82e-09,53;UBERON:0002616,3.82e-09,53;UBERON:0001894,1.89e-08,7;UBERON:0006222,1.89e-08,7;UBERON:0009663,2.18e-08,7;UBERON:0010371,2.22e-08,104;UBERON:0007023,8.86e-08,114;UBERON:0000955,3.04e-07,68;UBERON:0006238,3.04e-07,68;UBERON:0002420,8.37e-07,9;UBERON:0000125,8.37e-07,9;UBERON:0007245,8.37e-07,9;UBERON:0002308,8.37e-07,9;UBERON:0010009,8.37e-07,9;UBERON:0010011,8.37e-07,9;UBERON:0000454,8.37e-07,9;UBERON:0010314,8.99e-07,132 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.247266929278557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144119953416961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159426272728822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278304294485554,0,0,0,0,0,0,0,0,0,0,0,0.723578631752448,0,0.331737779793674,0,0.219385397153973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0.123563938946503,0,0.337005664903385,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.104602846312333,0,0,0,1.09524303113594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.544813624446302,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.517131825446202,0.52893040697076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.573409195690071,0.110929051536852,1.05563885000352,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276516872303462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126831620387814,0,0,0,0,0,0,0,0,0,0,0,0,0.203909198930495,0.0657727735628491,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.57046773691956,0.594092800654172,0,0,0,0,0,0,0,0,0,0,0.143339583151451,0,0.0679914901909147,0,0,0,0,0,0,0,0,0.101988829741982,0,0.18378979906969,0,0,0,2.48750831837634,0.517164979309476,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.247266929278557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144119953416961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159426272728822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278304294485554,0,0,0,0,0,0,0,0,0,0,0,0.723578631752448,0,0.331737779793674,0,0.219385397153973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0.123563938946503,0,0.337005664903385,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.104602846312333,0,0,0,1.09524303113594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.544813624446302,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.517131825446202,0.52893040697076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.573409195690071,0.110929051536852,1.05563885000352,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276516872303462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126831620387814,0,0,0,0,0,0,0,0,0,0,0,0,0.203909198930495,0.0657727735628491,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.57046773691956,0.594092800654172,0,0,0,0,0,0,0,0,0,0,0.143339583151451,0,0.0679914901909147,0,0,0,0,0,0,0,0,0.101988829741982,0,0.18378979906969,0,0,0,2.48750831837634,0.517164979309476,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p28@AHCYL1 | |short_description=p28@AHCYL1 | ||
}} | }} |
Latest revision as of 23:36, 15 September 2015
Short description: | p28@AHCYL1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_28_at_AHCYL1_5end |
Coexpression cluster: | C162_spinal_locus_medulla_substantia_thalamus_globus_diencephalon |
Association with transcript: | -54bp_to_NM_001242675, NM_001242676_5end |
EntrezGene: | AHCYL1 |
HGNC: | 344 |
UniProt: | B4E168O43865 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data