FFCP PHASE1:Hg19::chr3:101498482..101498540,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=91775 | |EntrezGene=91775 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28238 | |HGNC=28238 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=143bp_to_ENST00000487830_5end | |association_with_transcript=143bp_to_ENST00000487830_5end | ||
|cluster_id=chr3:101498482..101498540,+ | |||
|coexpression_cluster_id=C4 | |||
|description=CAGE_peak_2_at_FAM55C_5end | |description=CAGE_peak_2_at_FAM55C_5end | ||
|id=chr3:101498482..101498540,+ | |id=chr3:101498482..101498540,+ | ||
|ontology_enrichment_celltype=CL:0000055!1.38e-21!180;CL:0000680!1.02e-14!57;CL:0000056!1.02e-14!57;CL:0000355!1.02e-14!57;CL:0000187!1.44e-13!54;CL:0000183!5.23e-13!59;CL:0000057!1.94e-12!75;CL:0000393!2.21e-11!60;CL:0000211!2.21e-11!60;CL:0000192!3.42e-11!42;CL:0000514!3.42e-11!42;CL:0000359!2.21e-09!32 | |ontology_enrichment_celltype=CL:0000055!1.38e-21!180;CL:0000680!1.02e-14!57;CL:0000056!1.02e-14!57;CL:0000355!1.02e-14!57;CL:0000187!1.44e-13!54;CL:0000183!5.23e-13!59;CL:0000057!1.94e-12!75;CL:0000393!2.21e-11!60;CL:0000211!2.21e-11!60;CL:0000192!3.42e-11!42;CL:0000514!3.42e-11!42;CL:0000359!2.21e-09!32 | ||
|ontology_enrichment_celltype_v019=CL:0000359;4.09e-09;32!CL:0000192;1.19e-08;43!CL:0000187;3.85e-08;55!CL:0000393;3.52e-07;61!CL:0000211;3.52e-07;61 | |||
|ontology_enrichment_celltype_v019_2=CL:0000680,1.31e-15,58;CL:0000056,1.31e-15,58;CL:0000355,1.31e-15,58;CL:0000187,2.07e-14,55;CL:0000057,9.32e-13,76;CL:0000393,4.08e-12,61;CL:0000211,4.08e-12,61;CL:0000192,6.20e-12,43;CL:0000514,6.20e-12,43;CL:0000359,1.06e-09,32 | |||
|ontology_enrichment_development_v019=CL:0000514;1.19e-08;43!CL:0000355;2.40e-08;58 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002616!4.35e-23!59;UBERON:0001049!4.23e-22!57;UBERON:0005068!4.23e-22!57;UBERON:0006241!4.23e-22!57;UBERON:0007135!4.23e-22!57;UBERON:0000955!3.86e-21!69;UBERON:0006238!3.86e-21!69;UBERON:0000033!1.27e-19!123;UBERON:0001017!3.73e-19!82;UBERON:0000475!5.34e-19!365;UBERON:0005743!6.86e-19!86;UBERON:0000914!4.04e-18!83;UBERON:0002329!4.04e-18!83;UBERON:0003077!4.04e-18!83;UBERON:0003059!4.04e-18!83;UBERON:0007282!4.04e-18!83;UBERON:0009618!4.04e-18!83;UBERON:0007285!4.04e-18!83;UBERON:0003075!7.64e-18!86;UBERON:0007284!7.64e-18!86;UBERON:0002780!8.94e-18!41;UBERON:0001890!8.94e-18!41;UBERON:0006240!8.94e-18!41;UBERON:0000153!1.57e-17!129;UBERON:0007811!1.57e-17!129;UBERON:0003080!2.73e-17!42;UBERON:0000073!2.90e-17!94;UBERON:0001016!2.90e-17!94;UBERON:0007023!4.34e-17!115;UBERON:0002346!1.39e-16!90;UBERON:0004290!2.15e-16!70;UBERON:0001134!7.05e-15!61;UBERON:0002036!7.05e-15!61;UBERON:0003082!7.05e-15!61;UBERON:0002385!1.24e-14!63;UBERON:0001015!1.24e-14!63;UBERON:0000383!1.24e-14!63;UBERON:0001893!1.52e-14!34;UBERON:0002020!1.54e-14!34;UBERON:0003528!1.54e-14!34;UBERON:0000119!1.57e-14!312;UBERON:0003056!2.70e-14!61;UBERON:0000486!4.35e-14!82;UBERON:0000483!5.45e-14!309;UBERON:0002791!6.17e-14!33;UBERON:0004111!1.02e-13!241;UBERON:0004121!1.06e-13!169;UBERON:0001869!2.94e-13!32;UBERON:0000025!4.04e-13!194;UBERON:0000924!4.51e-13!173;UBERON:0006601!4.51e-13!173;UBERON:0000477!5.28e-13!286;UBERON:0000481!2.87e-10!347;UBERON:0002619!7.66e-10!22;UBERON:0000956!1.43e-09!25;UBERON:0000203!1.43e-09!25;UBERON:0001950!9.66e-09!20;UBERON:0004573!2.57e-07!33;UBERON:0004571!2.57e-07!33;UBERON:0005256!4.59e-07!143;UBERON:0000468!4.63e-07!659;UBERON:0001637!5.40e-07!42;UBERON:0003509!5.40e-07!42;UBERON:0004572!5.40e-07!42;UBERON:0002308!9.79e-07!9;UBERON:0000125!9.79e-07!9;UBERON:0001009!9.97e-07!113 | |ontology_enrichment_uberon=UBERON:0002616!4.35e-23!59;UBERON:0001049!4.23e-22!57;UBERON:0005068!4.23e-22!57;UBERON:0006241!4.23e-22!57;UBERON:0007135!4.23e-22!57;UBERON:0000955!3.86e-21!69;UBERON:0006238!3.86e-21!69;UBERON:0000033!1.27e-19!123;UBERON:0001017!3.73e-19!82;UBERON:0000475!5.34e-19!365;UBERON:0005743!6.86e-19!86;UBERON:0000914!4.04e-18!83;UBERON:0002329!4.04e-18!83;UBERON:0003077!4.04e-18!83;UBERON:0003059!4.04e-18!83;UBERON:0007282!4.04e-18!83;UBERON:0009618!4.04e-18!83;UBERON:0007285!4.04e-18!83;UBERON:0003075!7.64e-18!86;UBERON:0007284!7.64e-18!86;UBERON:0002780!8.94e-18!41;UBERON:0001890!8.94e-18!41;UBERON:0006240!8.94e-18!41;UBERON:0000153!1.57e-17!129;UBERON:0007811!1.57e-17!129;UBERON:0003080!2.73e-17!42;UBERON:0000073!2.90e-17!94;UBERON:0001016!2.90e-17!94;UBERON:0007023!4.34e-17!115;UBERON:0002346!1.39e-16!90;UBERON:0004290!2.15e-16!70;UBERON:0001134!7.05e-15!61;UBERON:0002036!7.05e-15!61;UBERON:0003082!7.05e-15!61;UBERON:0002385!1.24e-14!63;UBERON:0001015!1.24e-14!63;UBERON:0000383!1.24e-14!63;UBERON:0001893!1.52e-14!34;UBERON:0002020!1.54e-14!34;UBERON:0003528!1.54e-14!34;UBERON:0000119!1.57e-14!312;UBERON:0003056!2.70e-14!61;UBERON:0000486!4.35e-14!82;UBERON:0000483!5.45e-14!309;UBERON:0002791!6.17e-14!33;UBERON:0004111!1.02e-13!241;UBERON:0004121!1.06e-13!169;UBERON:0001869!2.94e-13!32;UBERON:0000025!4.04e-13!194;UBERON:0000924!4.51e-13!173;UBERON:0006601!4.51e-13!173;UBERON:0000477!5.28e-13!286;UBERON:0000481!2.87e-10!347;UBERON:0002619!7.66e-10!22;UBERON:0000956!1.43e-09!25;UBERON:0000203!1.43e-09!25;UBERON:0001950!9.66e-09!20;UBERON:0004573!2.57e-07!33;UBERON:0004571!2.57e-07!33;UBERON:0005256!4.59e-07!143;UBERON:0000468!4.63e-07!659;UBERON:0001637!5.40e-07!42;UBERON:0003509!5.40e-07!42;UBERON:0004572!5.40e-07!42;UBERON:0002308!9.79e-07!9;UBERON:0000125!9.79e-07!9;UBERON:0001009!9.97e-07!113 | ||
|ontology_enrichment_uberon_v019=UBERON:0002780;2.77e-13;41!UBERON:0001890;2.77e-13;41!UBERON:0000073;4.30e-13;53!UBERON:0002616;4.30e-13;53!UBERON:0001893;5.47e-13;34!UBERON:0003528;8.25e-13;34!UBERON:0002020;8.25e-13;34!UBERON:0001869;2.33e-12;32!UBERON:0002791;2.49e-12;32!UBERON:0000955;2.09e-10;68!UBERON:0002619;2.52e-10;22!UBERON:0001017;3.03e-10;75!UBERON:0000956;6.41e-10;25!UBERON:0000203;6.41e-10;25!UBERON:0001950;3.60e-09;20!UBERON:0002385;1.05e-07;31!UBERON:0001015;1.05e-07;31!UBERON:0000383;1.05e-07;31!UBERON:0001016;1.88e-07;83!UBERON:0000125;5.44e-07;9!UBERON:0002308;5.44e-07;9 | |||
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| ||
|short_description=p2@FAM55C | |short_description=p2@FAM55C | ||
}} | }} |
Latest revision as of 07:03, 19 September 2015
Short description: | p2@FAM55C |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_FAM55C_5end |
Coexpression cluster: | C4_optic_corpus_substantia_medulla_spinal_thalamus_globus |
Association with transcript: | 143bp_to_ENST00000487830_5end |
EntrezGene: | FAM55C |
HGNC: | 28238 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
muscle precursor cell | 1.31e-15 | 58 |
myoblast | 1.31e-15 | 58 |
multi-potent skeletal muscle stem cell | 1.31e-15 | 58 |
muscle cell | 2.07e-14 | 55 |
fibroblast | 9.32e-13 | 76 |
electrically responsive cell | 4.08e-12 | 61 |
electrically active cell | 4.08e-12 | 61 |
smooth muscle cell | 6.20e-12 | 43 |
smooth muscle myoblast | 6.20e-12 | 43 |
vascular associated smooth muscle cell | 1.06e-09 | 32 |