FFCP PHASE1:Hg19::chr17:74068778..74068799,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr17:74068778..74068799,-
|short_description=p4@SRP68
|description=CAGE_peak_4_at_SRP68_5end
|association_with_transcript=-171bp_to_ENST00000307877,ENST0000054...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=6730 | |EntrezGene=6730 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11302 | |HGNC=11302 | ||
|TSSclassifier=strong | |||
|UniProt=Q9UHB9,F5H281,B3KMI9 | |UniProt=Q9UHB9,F5H281,B3KMI9 | ||
|association_with_transcript=-171bp_to_ENST00000307877,ENST00000540937,NM_014230,uc002jqk.1,uc002jql.1_5end | |||
|cluster_id=chr17:74068778..74068799,- | |||
|coexpression_cluster_id=C21 | |||
|description=CAGE_peak_4_at_SRP68_5end | |||
|id=chr17:74068778..74068799,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000228;9.48e-18;1!CL:0002372;9.48e-18;1!CL:0000737;1.51e-17;4!CL:0002593;1.51e-09;2!CL:0000746;6.88e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000228,6.23e-18,1;CL:0002372,6.23e-18,1;CL:0000737,1.22e-17,4;CL:0002593,2.02e-09,2;CL:0000746,6.88e-07,3;CL:0000513,6.88e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000513;6.88e-07;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:4074;1.51e-09;2!DOID:4905;1.51e-09;2!DOID:3498;1.51e-09;2 | |||
|ontology_enrichment_disease_v019_2=DOID:4074,1.71e-09,2;DOID:4905,1.71e-09,2;DOID:3498,1.71e-09,2 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0002331;7.82e-16;10!UBERON:0000178;9.13e-11;15!UBERON:0000179;9.13e-11;15!UBERON:0000463;9.13e-11;15!UBERON:0002456;1.51e-09;2!UBERON:0000478;6.22e-07;24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002331,7.83e-16,10;UBERON:0000358,7.83e-16,10;UBERON:0000307,7.83e-16,10;UBERON:0000091,7.83e-16,10;UBERON:0000087,7.83e-16,10;UBERON:0007010,7.83e-16,10;UBERON:0007806,7.83e-16,10;UBERON:0008780,7.83e-16,10;UBERON:0005728,7.83e-16,10;UBERON:0000178,9.14e-11,15;UBERON:0000179,9.14e-11,15;UBERON:0000463,9.14e-11,15;UBERON:0002456,2.02e-09,2;UBERON:0004535,4.69e-07,109;UBERON:0000478,6.22e-07,24;UBERON:0001009,7.47e-07,112 | |||
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| ||
|short_description=p4@SRP68 | |||
}} | }} |
Latest revision as of 13:51, 17 September 2015
Short description: | p4@SRP68 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_SRP68_5end |
Coexpression cluster: | C21_cord_mycosis_hairy_xeroderma_adult_CD4_anaplastic |
Association with transcript: | -171bp_to_ENST00000307877, ENST00000540937, NM_014230, uc002jqk.1, uc002jql.1_5end |
EntrezGene: | SRP68 |
HGNC: | 11302 |
UniProt: | Q9UHB9F5H281B3KMI9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
multinucleate cell | 6.23e-18 | 1 |
myotube | 6.23e-18 | 1 |
striated muscle cell | 1.22e-17 | 4 |
smooth muscle cell of the internal thoracic artery | 2.02e-09 | 2 |
cardiac muscle cell | 6.88e-07 | 3 |
cardiac muscle myoblast | 6.88e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
umbilical cord | 7.83e-16 | 10 |
blastocyst | 7.83e-16 | 10 |
blastula | 7.83e-16 | 10 |
bilaminar disc | 7.83e-16 | 10 |
inner cell mass | 7.83e-16 | 10 |
cleaving embryo | 7.83e-16 | 10 |
connecting stalk | 7.83e-16 | 10 |
inner cell mass derived epiblast | 7.83e-16 | 10 |
extraembryonic mesoderm | 7.83e-16 | 10 |
blood | 9.14e-11 | 15 |
haemolymphatic fluid | 9.14e-11 | 15 |
organism substance | 9.14e-11 | 15 |
internal thoracic artery | 2.02e-09 | 2 |
cardiovascular system | 4.69e-07 | 109 |
extraembryonic structure | 6.22e-07 | 24 |
circulatory system | 7.47e-07 | 112 |
Ontology term | p-value | n |
---|---|---|
pancreas adenocarcinoma | 1.71e-09 | 2 |
pancreatic carcinoma | 1.71e-09 | 2 |
pancreatic ductal adenocarcinoma | 1.71e-09 | 2 |