FFCP PHASE1:Hg19::chr10:119000662..119000688,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6571 | |EntrezGene=6571 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10935 | |HGNC=10935 | ||
|TSSclassifier=strong | |||
|UniProt=Q05940 | |UniProt=Q05940 | ||
|association_with_transcript=-27bp_to_uc001ldd.1,uc009xyy.1_5end | |association_with_transcript=-27bp_to_uc001ldd.1,uc009xyy.1_5end | ||
|cluster_id=chr10:119000662..119000688,+ | |||
|coexpression_cluster_id=C64 | |coexpression_cluster_id=C64 | ||
|description=CAGE_peak_2_at_SLC18A2_5end | |description=CAGE_peak_2_at_SLC18A2_5end | ||
|id=chr10:119000662..119000688,+ | |id=chr10:119000662..119000688,+ | ||
|ontology_enrichment_celltype=CL:0002274!4.07e-10!5;CL:0000457!4.07e-10!5;CL:0002191!4.07e-10!5;CL:0000097!4.07e-10!5;CL:0000831!4.07e-10!5;CL:0002028!4.07e-10!5 | |ontology_enrichment_celltype=CL:0002274!4.07e-10!5;CL:0000457!4.07e-10!5;CL:0002191!4.07e-10!5;CL:0000097!4.07e-10!5;CL:0000831!4.07e-10!5;CL:0002028!4.07e-10!5 | ||
|ontology_enrichment_celltype_v019=CL:0000097;3.48e-29;5!CL:0000163;4.06e-16;9!CL:0001014;1.44e-12;2!CL:0001016;1.44e-12;2!CL:0000540;2.11e-08;6!CL:0000404;2.11e-08;6!CL:0000451;3.05e-08;10!CL:0000784;4.71e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000097,3.49e-29,5;CL:0002028,3.49e-29,5;CL:0000163,4.06e-16,9;CL:0001014,1.44e-12,2;CL:0001016,1.44e-12,2;CL:0000540,1.90e-08,6;CL:0000031,1.90e-08,6;CL:0000404,1.90e-08,6;CL:0000451,3.23e-08,10;CL:0000784,5.25e-08,3 | |||
|ontology_enrichment_development_v019=CL:0000031;2.11e-08;6!UBERON:0006242;7.82e-07;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:8552;4.69e-07;1!DOID:1036;7.67e-07;8 | |||
|ontology_enrichment_disease_v019_2=DOID:8552,4.69e-07,1;DOID:1036,7.60e-07,8 | |||
|ontology_enrichment_uberon=UBERON:0007023!4.19e-23!115;UBERON:0002298!2.44e-09!8 | |ontology_enrichment_uberon=UBERON:0007023!4.19e-23!115;UBERON:0002298!2.44e-09!8 | ||
|ontology_enrichment_uberon_v019=UBERON:0002370;1.01e-11;2!UBERON:0005058;1.01e-11;2!UBERON:0009113;1.01e-11;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,7.33e-07,98;UBERON:0003061,7.33e-07,98 | |||
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| ||
|short_description=p2@SLC18A2 | |short_description=p2@SLC18A2 | ||
}} | }} |
Latest revision as of 15:16, 16 September 2015
Short description: | p2@SLC18A2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_SLC18A2_5end |
Coexpression cluster: | C64_Mast_chronic_acute_immature_chorionic_Basophils_Dendritic |
Association with transcript: | -27bp_to_uc001ldd.1, uc009xyy.1_5end |
EntrezGene: | SLC18A2 |
HGNC: | 10935 |
UniProt: | Q05940 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mast cell | 3.49e-29 | 5 |
basophil mast progenitor cell | 3.49e-29 | 5 |
endocrine cell | 4.06e-16 | 9 |
CD1a-positive Langerhans cell | 1.44e-12 | 2 |
immature CD1a-positive Langerhans cell | 1.44e-12 | 2 |
neuron | 1.90e-08 | 6 |
neuroblast | 1.90e-08 | 6 |
electrically signaling cell | 1.90e-08 | 6 |
dendritic cell | 3.23e-08 | 10 |
plasmacytoid dendritic cell | 5.25e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 7.33e-07 | 98 |
blood island | 7.33e-07 | 98 |
Ontology term | p-value | n |
---|---|---|
chronic myeloid leukemia | 4.69e-07 | 1 |
chronic leukemia | 7.60e-07 | 8 |