FFCP PHASE1:Hg19::chr10:4823011..4823022,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:4823011..4823022,- | |||
|coexpression_cluster_id=C3021 | |coexpression_cluster_id=C3021 | ||
|description=CAGE_peak_at_chr10:4823011..4823022,- | |description=CAGE_peak_at_chr10:4823011..4823022,- | ||
|id=chr10:4823011..4823022,- | |id=chr10:4823011..4823022,- | ||
|ontology_enrichment_celltype=CL:0002139!5.20e-23!24;CL:0000071!3.16e-15!18;CL:0002546!3.16e-15!18;CL:0000115!3.35e-15!35;CL:0002078!1.02e-11!44;CL:0005020!9.93e-10!6;CL:0002138!9.93e-10!6;CL:0005022!9.93e-10!6;CL:0002543!3.04e-09!6;CL:0002144!4.32e-09!3;CL:0002618!8.74e-09!3;CL:0000213!1.24e-08!57;CL:0000215!1.24e-08!57;CL:0000222!6.27e-08!119;CL:1000306!9.48e-07!4;CL:0002547!9.48e-07!4 | |ontology_enrichment_celltype=CL:0002139!5.20e-23!24;CL:0000071!3.16e-15!18;CL:0002546!3.16e-15!18;CL:0000115!3.35e-15!35;CL:0002078!1.02e-11!44;CL:0005020!9.93e-10!6;CL:0002138!9.93e-10!6;CL:0005022!9.93e-10!6;CL:0002543!3.04e-09!6;CL:0002144!4.32e-09!3;CL:0002618!8.74e-09!3;CL:0000213!1.24e-08!57;CL:0000215!1.24e-08!57;CL:0000222!6.27e-08!119;CL:1000306!9.48e-07!4;CL:0002547!9.48e-07!4 | ||
|ontology_enrichment_celltype_v019=CL:0002138;3.55e-27;6!CL:0002139;1.25e-15;24!CL:0002144;1.40e-14;3!CL:0000115;1.04e-08;36!CL:0002078;1.47e-07;45 | |||
|ontology_enrichment_celltype_v019_2=CL:0005020,3.55e-27,6;CL:0002138,3.55e-27,6;CL:0005022,3.55e-27,6;CL:0002139,1.25e-15,24;CL:0002144,1.40e-14,3;CL:0000115,1.05e-10,36;CL:0002078,1.01e-08,45;CL:0000213,6.27e-07,58;CL:0000215,6.27e-07,58 | |||
|ontology_enrichment_development_v019=CL:0005022;3.55e-27;6 | |||
|ontology_enrichment_disease=DOID:3347!2.67e-07!1;DOID:0060085!3.40e-07!1;DOID:3165!3.40e-07!1;DOID:0060121!3.40e-07!1;DOID:2438!3.40e-07!1;DOID:4418!3.40e-07!1;DOID:3112!6.49e-07!1 | |ontology_enrichment_disease=DOID:3347!2.67e-07!1;DOID:0060085!3.40e-07!1;DOID:3165!3.40e-07!1;DOID:0060121!3.40e-07!1;DOID:2438!3.40e-07!1;DOID:4418!3.40e-07!1;DOID:3112!6.49e-07!1 | ||
|ontology_enrichment_disease_v019=DOID:4556;1.22e-14;3!DOID:3908;2.53e-09;5 | |||
|ontology_enrichment_disease_v019_2=DOID:4556,1.22e-14,3;DOID:3908,2.53e-09,5 | |||
|ontology_enrichment_uberon=UBERON:0000055!2.39e-18!69;UBERON:0002049!1.36e-15!79;UBERON:0007798!1.36e-15!79;UBERON:0001986!3.16e-15!18;UBERON:0004638!3.16e-15!18;UBERON:0004852!3.16e-15!18;UBERON:0001981!9.40e-14!60;UBERON:0007500!9.40e-14!60;UBERON:0004537!9.40e-14!60;UBERON:0006965!9.40e-14!60;UBERON:0004535!2.43e-13!110;UBERON:0001009!6.93e-13!113;UBERON:0004872!2.22e-12!84;UBERON:0000487!2.70e-12!22;UBERON:0006914!1.04e-10!25;UBERON:0001915!4.32e-09!3;UBERON:0001982!4.32e-09!3;UBERON:0003914!6.19e-08!118;UBERON:0001637!1.18e-07!42;UBERON:0003509!1.18e-07!42;UBERON:0004572!1.18e-07!42;UBERON:0001473!2.12e-07!8;UBERON:0004536!2.12e-07!8;UBERON:0006558!2.12e-07!8;UBERON:0000947!7.92e-07!21;UBERON:0010191!7.92e-07!21;UBERON:0000415!9.48e-07!4;UBERON:0007240!9.48e-07!4;UBERON:0005742!9.48e-07!4;UBERON:0005734!9.48e-07!4;UBERON:0004664!9.48e-07!4;UBERON:0004663!9.48e-07!4 | |ontology_enrichment_uberon=UBERON:0000055!2.39e-18!69;UBERON:0002049!1.36e-15!79;UBERON:0007798!1.36e-15!79;UBERON:0001986!3.16e-15!18;UBERON:0004638!3.16e-15!18;UBERON:0004852!3.16e-15!18;UBERON:0001981!9.40e-14!60;UBERON:0007500!9.40e-14!60;UBERON:0004537!9.40e-14!60;UBERON:0006965!9.40e-14!60;UBERON:0004535!2.43e-13!110;UBERON:0001009!6.93e-13!113;UBERON:0004872!2.22e-12!84;UBERON:0000487!2.70e-12!22;UBERON:0006914!1.04e-10!25;UBERON:0001915!4.32e-09!3;UBERON:0001982!4.32e-09!3;UBERON:0003914!6.19e-08!118;UBERON:0001637!1.18e-07!42;UBERON:0003509!1.18e-07!42;UBERON:0004572!1.18e-07!42;UBERON:0001473!2.12e-07!8;UBERON:0004536!2.12e-07!8;UBERON:0006558!2.12e-07!8;UBERON:0000947!7.92e-07!21;UBERON:0010191!7.92e-07!21;UBERON:0000415!9.48e-07!4;UBERON:0007240!9.48e-07!4;UBERON:0005742!9.48e-07!4;UBERON:0005734!9.48e-07!4;UBERON:0004664!9.48e-07!4;UBERON:0004663!9.48e-07!4 | ||
|ontology_enrichment_uberon_v019=UBERON:0001473;1.10e-20;8!UBERON:0004536;1.10e-20;8!UBERON:0006558;1.10e-20;8!UBERON:0002465;8.81e-17;10!UBERON:0010523;1.40e-14;3!UBERON:0001915;1.40e-14;3!UBERON:0001982;1.40e-14;3!UBERON:0002405;7.45e-07;27 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001473,1.10e-20,8;UBERON:0004536,1.10e-20,8;UBERON:0006558,1.10e-20,8;UBERON:0002465,8.81e-17,10;UBERON:0010523,1.40e-14,3;UBERON:0001915,1.40e-14,3;UBERON:0001982,1.40e-14,3 | |||
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|short_description=p@chr10:4823011..4823022,- | |short_description=p@chr10:4823011..4823022,- | ||
}} | }} |
Latest revision as of 13:53, 23 July 2015
Short description: | p@chr10:4823011..4823022, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:4823011..4823022, - |
Coexpression cluster: | C3021_large_Fibroblast_giant_Lymphatic_medulloblastoma_Endothelial_squamous |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphangioblast | 3.55e-27 | 6 |
endothelial cell of lymphatic vessel | 3.55e-27 | 6 |
vascular lymphangioblast | 3.55e-27 | 6 |
endothelial cell of vascular tree | 1.25e-15 | 24 |
capillary endothelial cell | 1.40e-14 | 3 |
endothelial cell | 1.05e-10 | 36 |
meso-epithelial cell | 1.01e-08 | 45 |
lining cell | 6.27e-07 | 58 |
barrier cell | 6.27e-07 | 58 |
Ontology term | p-value | n |
---|---|---|
lymphatic vessel | 1.10e-20 | 8 |
lymph vasculature | 1.10e-20 | 8 |
lymphatic part of lymphoid system | 1.10e-20 | 8 |
lymphoid system | 8.81e-17 | 10 |
microcirculatory vessel | 1.40e-14 | 3 |
endothelium of capillary | 1.40e-14 | 3 |
capillary | 1.40e-14 | 3 |
Ontology term | p-value | n |
---|---|---|
lung large cell carcinoma | 1.22e-14 | 3 |
non-small cell lung carcinoma | 2.53e-09 | 5 |