FFCP PHASE1:Hg19::chr11:116707059..116707069,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr11:116707059..116707069,- | |||
|coexpression_cluster_id=C5 | |coexpression_cluster_id=C5 | ||
|description=CAGE_peak_at_chr11:116707059..116707069,- | |description=CAGE_peak_at_chr11:116707059..116707069,- | ||
|id=chr11:116707059..116707069,- | |id=chr11:116707059..116707069,- | ||
|ontology_enrichment_celltype=CL:0000181!4.99e-25!12;CL:0000417!4.99e-25!12;CL:0000668!4.99e-25!12;CL:0000414!4.99e-25!12;CL:0000412!4.99e-25!12;CL:0000182!4.99e-25!12;CL:0000223!3.89e-08!59 | |ontology_enrichment_celltype=CL:0000181!4.99e-25!12;CL:0000417!4.99e-25!12;CL:0000668!4.99e-25!12;CL:0000414!4.99e-25!12;CL:0000412!4.99e-25!12;CL:0000182!4.99e-25!12;CL:0000223!3.89e-08!59 | ||
|ontology_enrichment_celltype_v019=CL:0000182;9.80e-16;12!CL:0002231;6.34e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,1.00e-15,12;CL:0002231,5.93e-08,3 | |||
|ontology_enrichment_development_v019=UBERON:0004161;3.20e-08;11!UBERON:0009497;4.32e-07;13 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!1.16e-27!19;UBERON:0006925!1.16e-27!19;UBERON:0008836!1.16e-27!19;UBERON:0008835!9.35e-24!22;UBERON:0003894!9.35e-24!22;UBERON:0009854!1.11e-22!23;UBERON:0007499!8.74e-21!25;UBERON:0009497!8.74e-21!25;UBERON:0000015!8.74e-21!25;UBERON:0002423!8.74e-21!25;UBERON:0006235!8.74e-21!25;UBERON:0004161!8.74e-21!25;UBERON:0005057!6.02e-20!26;UBERON:0009856!6.02e-20!26;UBERON:0002365!1.45e-16!31;UBERON:0002330!1.45e-16!31;UBERON:0002368!1.49e-14!35;UBERON:0003929!3.71e-14!54;UBERON:0000949!4.39e-11!45;UBERON:0002530!2.14e-10!59;UBERON:0004921!2.76e-10!129;UBERON:0004185!2.76e-10!129;UBERON:0005172!7.11e-09!55;UBERON:0005173!7.11e-09!55;UBERON:0005911!8.78e-09!82;UBERON:0001007!3.71e-08!155;UBERON:0001555!3.71e-08!155;UBERON:0007026!3.71e-08!155;UBERON:0002417!6.76e-08!61;UBERON:0000916!6.76e-08!61;UBERON:0000160!2.52e-07!27;UBERON:0004119!2.78e-07!169;UBERON:0000925!2.78e-07!169;UBERON:0006595!2.78e-07!169 | |ontology_enrichment_uberon=UBERON:0002107!1.16e-27!19;UBERON:0006925!1.16e-27!19;UBERON:0008836!1.16e-27!19;UBERON:0008835!9.35e-24!22;UBERON:0003894!9.35e-24!22;UBERON:0009854!1.11e-22!23;UBERON:0007499!8.74e-21!25;UBERON:0009497!8.74e-21!25;UBERON:0000015!8.74e-21!25;UBERON:0002423!8.74e-21!25;UBERON:0006235!8.74e-21!25;UBERON:0004161!8.74e-21!25;UBERON:0005057!6.02e-20!26;UBERON:0009856!6.02e-20!26;UBERON:0002365!1.45e-16!31;UBERON:0002330!1.45e-16!31;UBERON:0002368!1.49e-14!35;UBERON:0003929!3.71e-14!54;UBERON:0000949!4.39e-11!45;UBERON:0002530!2.14e-10!59;UBERON:0004921!2.76e-10!129;UBERON:0004185!2.76e-10!129;UBERON:0005172!7.11e-09!55;UBERON:0005173!7.11e-09!55;UBERON:0005911!8.78e-09!82;UBERON:0001007!3.71e-08!155;UBERON:0001555!3.71e-08!155;UBERON:0007026!3.71e-08!155;UBERON:0002417!6.76e-08!61;UBERON:0000916!6.76e-08!61;UBERON:0000160!2.52e-07!27;UBERON:0004119!2.78e-07!169;UBERON:0000925!2.78e-07!169;UBERON:0006595!2.78e-07!169 | ||
|ontology_enrichment_uberon_v019=UBERON:0002107;1.98e-26;19!UBERON:0006925;1.98e-26;19!UBERON:0002423;3.77e-20;25!UBERON:0002365;2.95e-16;31!UBERON:0002330;2.95e-16;31!UBERON:0002368;4.45e-14;33!UBERON:0000949;2.85e-10;43!UBERON:0001007;1.62e-08;81!UBERON:0002530;4.89e-08;57!UBERON:0002114;7.76e-08;2!UBERON:0005172;1.80e-07;52!UBERON:0005173;1.80e-07;52 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,1.98e-26,19;UBERON:0006925,1.98e-26,19;UBERON:0008836,1.98e-26,19;UBERON:0008835,7.29e-23,22;UBERON:0003894,7.29e-23,22;UBERON:0009854,7.01e-22,23;UBERON:0007499,3.77e-20,25;UBERON:0009497,3.77e-20,25;UBERON:0000015,3.77e-20,25;UBERON:0002423,3.77e-20,25;UBERON:0006235,3.77e-20,25;UBERON:0004161,3.77e-20,25;UBERON:0009856,2.20e-19,26;UBERON:0002365,2.72e-16,31;UBERON:0002330,2.72e-16,31;UBERON:0002368,1.89e-14,35;UBERON:0003929,2.80e-13,54;UBERON:0002530,3.78e-12,59;UBERON:0000949,2.85e-11,45;UBERON:0004921,2.37e-10,118;UBERON:0005172,2.08e-09,54;UBERON:0005173,2.08e-09,54;UBERON:0005911,1.04e-08,82;UBERON:0002417,1.78e-08,60;UBERON:0000916,1.78e-08,60;UBERON:0001007,2.34e-08,145;UBERON:0001555,2.34e-08,145;UBERON:0007026,2.34e-08,145;UBERON:0002114,8.29e-08,2;UBERON:0004119,1.56e-07,160;UBERON:0000925,1.56e-07,160;UBERON:0006595,1.56e-07,160 | |||
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|short_description=p@chr11:116707059..116707069,- | |short_description=p@chr11:116707059..116707069,- | ||
}} | }} |
Latest revision as of 18:29, 23 July 2015
Short description: | p@chr11:116707059..116707069, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:116707059..116707069, - |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 1.00e-15 | 12 |
epithelial cell of prostate | 5.93e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
liver | 1.98e-26 | 19 |
digestive gland | 1.98e-26 | 19 |
liver bud | 1.98e-26 | 19 |
hepatic diverticulum | 7.29e-23 | 22 |
liver primordium | 7.29e-23 | 22 |
digestive tract diverticulum | 7.01e-22 | 23 |
epithelial sac | 3.77e-20 | 25 |
epithelium of foregut-midgut junction | 3.77e-20 | 25 |
anatomical boundary | 3.77e-20 | 25 |
hepatobiliary system | 3.77e-20 | 25 |
foregut-midgut junction | 3.77e-20 | 25 |
septum transversum | 3.77e-20 | 25 |
sac | 2.20e-19 | 26 |
exocrine gland | 2.72e-16 | 31 |
exocrine system | 2.72e-16 | 31 |
endocrine gland | 1.89e-14 | 35 |
gut epithelium | 2.80e-13 | 54 |
gland | 3.78e-12 | 59 |
endocrine system | 2.85e-11 | 45 |
subdivision of digestive tract | 2.37e-10 | 118 |
abdomen element | 2.08e-09 | 54 |
abdominal segment element | 2.08e-09 | 54 |
endo-epithelium | 1.04e-08 | 82 |
abdominal segment of trunk | 1.78e-08 | 60 |
abdomen | 1.78e-08 | 60 |
digestive system | 2.34e-08 | 145 |
digestive tract | 2.34e-08 | 145 |
primitive gut | 2.34e-08 | 145 |
duodenum | 8.29e-08 | 2 |
endoderm-derived structure | 1.56e-07 | 160 |
endoderm | 1.56e-07 | 160 |
presumptive endoderm | 1.56e-07 | 160 |