FFCP PHASE1:Hg19::chr11:50257598..50257654,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=441601 | |EntrezGene=441601 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_NR_003034,uc001nhd.2_5end | |association_with_transcript=0bp_to_NR_003034,uc001nhd.2_5end | ||
|cluster_id=chr11:50257598..50257654,- | |||
|coexpression_cluster_id=C2135 | |coexpression_cluster_id=C2135 | ||
|description=CAGE_peak_1_at_LOC441601_5end | |description=CAGE_peak_1_at_LOC441601_5end | ||
|id=chr11:50257598..50257654,- | |id=chr11:50257598..50257654,- | ||
|ontology_enrichment_celltype=CL:0002541!7.12e-08!3 | |ontology_enrichment_celltype=CL:0002541!7.12e-08!3 | ||
|ontology_enrichment_celltype_v019=CL:0000039;2.18e-15;7!CL:0000586;2.18e-15;7!CL:0000054;5.81e-14;2!CL:0000137;5.81e-14;2!CL:0000092;5.81e-14;2!CL:0002541;1.53e-09;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,2.18e-15,7;CL:0000586,2.18e-15,7;CL:0000054,6.62e-14,2;CL:0000137,6.62e-14,2;CL:0000092,6.62e-14,2;CL:0002541,1.57e-09,3 | |||
|ontology_enrichment_development_v019=UBERON:0009117;4.06e-11;10!UBERON:0005564;4.06e-11;10!UBERON:0003124;9.10e-08;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:200;5.81e-14;2!DOID:4305;5.81e-14;2!DOID:1036;2.25e-13;8!DOID:0060085;3.80e-08;1!DOID:3165;3.80e-08;1!DOID:0060121;3.80e-08;1!DOID:2438;3.80e-08;1!DOID:4418;3.80e-08;1!DOID:3095;2.40e-07;22!DOID:2994;2.40e-07;22 | |||
|ontology_enrichment_disease_v019_2=DOID:200,6.62e-14,2;DOID:4305,6.62e-14,2;DOID:1036,2.25e-13,8;DOID:0060085,3.80e-08,1;DOID:3165,3.80e-08,1;DOID:0060121,3.80e-08,1;DOID:2438,3.80e-08,1;DOID:4418,3.80e-08,1;DOID:3095,2.40e-07,22;DOID:2994,2.40e-07,22 | |||
|ontology_enrichment_uberon=UBERON:0000476!7.12e-08!3;UBERON:0000920!7.12e-08!3;UBERON:0005631!5.02e-07!14;UBERON:0000158!5.02e-07!14 | |ontology_enrichment_uberon=UBERON:0000476!7.12e-08!3;UBERON:0000920!7.12e-08!3;UBERON:0005631!5.02e-07!14;UBERON:0000158!5.02e-07!14 | ||
|ontology_enrichment_uberon_v019=UBERON:0003135;4.61e-15;11!UBERON:0000473;7.24e-14;8!UBERON:0003124;1.53e-09;3!UBERON:0000920;1.53e-09;3!UBERON:0002371;1.10e-08;12!UBERON:0001282;3.32e-08;1!UBERON:0009842;3.32e-08;1!UBERON:0003704;3.32e-08;1!UBERON:0001171;3.32e-08;1!UBERON:0001172;3.32e-08;1!UBERON:0007195;1.15e-07;1!UBERON:0001301;1.64e-07;1!UBERON:0003101;2.06e-07;22!UBERON:0000079;2.06e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003135,5.03e-15,11;UBERON:0000473,7.24e-14,8;UBERON:0000920,1.57e-09,3;UBERON:0003124,7.94e-09,7;UBERON:0001282,3.32e-08,1;UBERON:0009842,3.32e-08,1;UBERON:0003704,3.32e-08,1;UBERON:0001171,3.32e-08,1;UBERON:0001172,3.32e-08,1;UBERON:0007195,1.11e-07,1;UBERON:0005631,1.90e-07,14;UBERON:0000158,1.90e-07,14;UBERON:0001301,1.99e-07,1;UBERON:0003101,2.15e-07,22;UBERON:0000079,2.15e-07,22 | |||
|phase1_expression=0.363356758541113,0,0.422863212287913,0,0,0,0,0,0.261185628199839,0,0,0,0,0,0,0,0,0,0,0.246242116153576,0,0.313454721478088,0,0.410623275218653,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.377875943688809,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.889509253863555,0,0,0.574752439954483,0.661044872784862,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.651083453856419,1.90090408889675,0,0,0,0.947109008176067,0.821127996921047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.4908447762644,0,0,0,0,0,0,0,0,0.39752481473341,0,0,0,0,0,0,0.258416759169329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.570471821544449,0.448346041655403,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.567160915800105,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.299918973546171,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496215615637554,0,0,0.384417447767103,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.46139224653261,0.105551628892876,0,0,0,0,0,0.501689773854853,0,0,0,0,0,0,0,0,1.23649213977267,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.38449446024797,0,0,0,0,0,0,0,0.202182481573316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286822704408103,0.491245205065606,0,0,0,0,0,0,0,0,0,0.753150406214233,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166849141711909,0,0,0,0,0,0,0,0,0,0.222886768554957,0,1.19372242368845,0.296964680832639,0.307160702099232,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197286811273867,0,3.33410970433911,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.295547618953547,0,0,0,0,24.9533102304933,5.7640976097015,0,9.01773186952667,0.957003479195758,3.20591576906518,7.46248686426089,0,0,0,6.54227415789824,7.4503763040741,7.55197141391292,14.6110374197623,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234264445725339,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.04836000945218,0,0,0,0,0,0,0,0,17.6856004415661,0.253243183823515,0,5.21032331634969,0,9.99048047910651,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.717873024576814,0.599037001496973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0,0.104909176269996,0,0,0,0,0,0,0,0,0,0,0,0,0.226624183040251,0,0,0,0,0,0,0,0,0,0,0.395223263795889,0,0,0,0,0,0,0,0.886068179966986,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0.149254802886874,0,0,0,1.50940741051545,0,0,0,0,2.51353754982378,0,0,0,0,0,0.521745061811734,0.150257608997218,0,0,0,0.107410557042488,0,0,0,0.343395705182793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.654261577023377,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.321146125482298,0,0,0,0.252071696221718,0,0,0,0,0,0,0,1.1441462864015,0,0,0,0,0,0,0,0,0.0675375846183947,0,0,0.126831620387814,0,0,0,0,0,0,0,0,0,5.32214220975833,0,0,0.0679697329768317,0.0657727735628491,0,0,0,0,0,0,0,0,0.285906176706625,0,0.116241425368125,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,28.5406145423769,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.730336388246517,0,0,0,0.0679914901909147,0,0,0,0,0,0,0,9.2489905738349,0,0,11.2111777432511,21.0594333005595,26.1436508852926,38.3188706123335,0,0,0,0,0.0645889098360061,0,12.3345048838675,0.891060215894309,0.606351566874658,0,0,0.0673520530145875,0.358611026963382,0.332660356546013,0,0,0,0,0,0,0,0,0,0 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|phase1_expression=0.363356758541113,0,0.422863212287913,0,0,0,0,0,0.261185628199839,0,0,0,0,0,0,0,0,0,0,0.246242116153576,0,0.313454721478088,0,0.410623275218653,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.377875943688809,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.889509253863555,0,0,0.574752439954483,0.661044872784862,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.651083453856419,1.90090408889675,0,0,0,0.947109008176067,0.821127996921047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.4908447762644,0,0,0,0,0,0,0,0,0.39752481473341,0,0,0,0,0,0,0.258416759169329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.570471821544449,0.448346041655403,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.567160915800105,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.299918973546171,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496215615637554,0,0,0.384417447767103,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.46139224653261,0.105551628892876,0,0,0,0,0,0.501689773854853,0,0,0,0,0,0,0,0,1.23649213977267,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.38449446024797,0,0,0,0,0,0,0,0.202182481573316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286822704408103,0.491245205065606,0,0,0,0,0,0,0,0,0,0.753150406214233,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166849141711909,0,0,0,0,0,0,0,0,0,0.222886768554957,0,1.19372242368845,0.296964680832639,0.307160702099232,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197286811273867,0,3.33410970433911,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.295547618953547,0,0,0,0,24.9533102304933,5.7640976097015,0,9.01773186952667,0.957003479195758,3.20591576906518,7.46248686426089,0,0,0,6.54227415789824,7.4503763040741,7.55197141391292,14.6110374197623,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234264445725339,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.04836000945218,0,0,0,0,0,0,0,0,17.6856004415661,0.253243183823515,0,5.21032331634969,0,9.99048047910651,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.717873024576814,0.599037001496973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0,0.104909176269996,0,0,0,0,0,0,0,0,0,0,0,0,0.226624183040251,0,0,0,0,0,0,0,0,0,0,0.395223263795889,0,0,0,0,0,0,0,0.886068179966986,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0.149254802886874,0,0,0,1.50940741051545,0,0,0,0,2.51353754982378,0,0,0,0,0,0.521745061811734,0.150257608997218,0,0,0,0.107410557042488,0,0,0,0.343395705182793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.654261577023377,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.321146125482298,0,0,0,0.252071696221718,0,0,0,0,0,0,0,1.1441462864015,0,0,0,0,0,0,0,0,0.0675375846183947,0,0,0.126831620387814,0,0,0,0,0,0,0,0,0,5.32214220975833,0,0,0.0679697329768317,0.0657727735628491,0,0,0,0,0,0,0,0,0.285906176706625,0,0.116241425368125,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,28.5406145423769,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.730336388246517,0,0,0,0.0679914901909147,0,0,0,0,0,0,0,9.2489905738349,0,0,11.2111777432511,21.0594333005595,26.1436508852926,38.3188706123335,0,0,0,0,0.0645889098360061,0,12.3345048838675,0.891060215894309,0.606351566874658,0,0,0.0673520530145875,0.358611026963382,0.332660356546013,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p1@LOC441601 | |short_description=p1@LOC441601 | ||
}} | }} |
Latest revision as of 06:57, 18 September 2015
Short description: | p1@LOC441601 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_LOC441601_5end |
Coexpression cluster: | C2135_testis_testicular_small_cholangiocellular_fibrous_chronic_thyroid |
Association with transcript: | 0bp_to_NR_003034, uc001nhd.2_5end |
EntrezGene: | LOC441601 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 2.18e-15 | 7 |
germ cell | 2.18e-15 | 7 |
bone matrix secreting cell | 6.62e-14 | 2 |
osteocyte | 6.62e-14 | 2 |
osteoclast | 6.62e-14 | 2 |
chorionic membrane mesenchymal stem cell | 1.57e-09 | 3 |
Ontology term | p-value | n |
---|---|---|
male reproductive organ | 5.03e-15 | 11 |
testis | 7.24e-14 | 8 |
egg chorion | 1.57e-09 | 3 |
chorion | 7.94e-09 | 7 |
intralobular bile duct | 3.32e-08 | 1 |
acinus | 3.32e-08 | 1 |
intrahepatic bile duct | 3.32e-08 | 1 |
portal lobule | 3.32e-08 | 1 |
hepatic acinus | 3.32e-08 | 1 |
stroma of bone marrow | 1.11e-07 | 1 |
extraembryonic membrane | 1.90e-07 | 14 |
membranous layer | 1.90e-07 | 14 |
epididymis | 1.99e-07 | 1 |
male organism | 2.15e-07 | 22 |
male reproductive system | 2.15e-07 | 22 |
Ontology term | p-value | n |
---|---|---|
giant cell tumor | 6.62e-14 | 2 |
bone giant cell tumor | 6.62e-14 | 2 |
chronic leukemia | 2.25e-13 | 8 |
organ system benign neoplasm | 3.80e-08 | 1 |
skin benign neoplasm | 3.80e-08 | 1 |
integumentary system benign neoplasm | 3.80e-08 | 1 |
dermis tumor | 3.80e-08 | 1 |
cutaneous fibrous histiocytoma | 3.80e-08 | 1 |
germ cell and embryonal cancer | 2.40e-07 | 22 |
germ cell cancer | 2.40e-07 | 22 |